Download or read book MATLAB for Brain and Cognitive Scientists written by Mike X Cohen and published by MIT Press. This book was released on 2017-05-12 with total page 572 pages. Available in PDF, EPUB and Kindle. Book excerpt: An introduction to a popular programming language for neuroscience research, taking the reader from beginning to intermediate and advanced levels of MATLAB programming. MATLAB is one of the most popular programming languages for neuroscience and psychology research. Its balance of usability, visualization, and widespread use makes it one of the most powerful tools in a scientist's toolbox. In this book, Mike Cohen teaches brain scientists how to program in MATLAB, with a focus on applications most commonly used in neuroscience and psychology. Although most MATLAB tutorials will abandon users at the beginner's level, leaving them to sink or swim, MATLAB for Brain and Cognitive Scientists takes readers from beginning to intermediate and advanced levels of MATLAB programming, helping them gain real expertise in applications that they will use in their work. The book offers a mix of instructive text and rigorous explanations of MATLAB code along with programming tips and tricks. The goal is to teach the reader how to program data analyses in neuroscience and psychology. Readers will learn not only how to but also how not to program, with examples of bad code that they are invited to correct or improve. Chapters end with exercises that test and develop the skills taught in each chapter. Interviews with neuroscientists and cognitive scientists who have made significant contributions their field using MATLAB appear throughout the book. MATLAB for Brain and Cognitive Scientists is an essential resource for both students and instructors, in the classroom or for independent study.
Download or read book MATLAB for Neuroscientists written by Pascal Wallisch and published by Academic Press. This book was released on 2014-01-09 with total page 571 pages. Available in PDF, EPUB and Kindle. Book excerpt: MATLAB for Neuroscientists serves as the only complete study manual and teaching resource for MATLAB, the globally accepted standard for scientific computing, in the neurosciences and psychology. This unique introduction can be used to learn the entire empirical and experimental process (including stimulus generation, experimental control, data collection, data analysis, modeling, and more), and the 2nd Edition continues to ensure that a wide variety of computational problems can be addressed in a single programming environment. This updated edition features additional material on the creation of visual stimuli, advanced psychophysics, analysis of LFP data, choice probabilities, synchrony, and advanced spectral analysis. Users at a variety of levels—advanced undergraduates, beginning graduate students, and researchers looking to modernize their skills—will learn to design and implement their own analytical tools, and gain the fluency required to meet the computational needs of neuroscience practitioners. - The first complete volume on MATLAB focusing on neuroscience and psychology applications - Problem-based approach with many examples from neuroscience and cognitive psychology using real data - Illustrated in full color throughout - Careful tutorial approach, by authors who are award-winning educators with strong teaching experience
Download or read book Analyzing Neural Time Series Data written by Mike X Cohen and published by MIT Press. This book was released on 2014-01-17 with total page 615 pages. Available in PDF, EPUB and Kindle. Book excerpt: A comprehensive guide to the conceptual, mathematical, and implementational aspects of analyzing electrical brain signals, including data from MEG, EEG, and LFP recordings. This book offers a comprehensive guide to the theory and practice of analyzing electrical brain signals. It explains the conceptual, mathematical, and implementational (via Matlab programming) aspects of time-, time-frequency- and synchronization-based analyses of magnetoencephalography (MEG), electroencephalography (EEG), and local field potential (LFP) recordings from humans and nonhuman animals. It is the only book on the topic that covers both the theoretical background and the implementation in language that can be understood by readers without extensive formal training in mathematics, including cognitive scientists, neuroscientists, and psychologists. Readers who go through the book chapter by chapter and implement the examples in Matlab will develop an understanding of why and how analyses are performed, how to interpret results, what the methodological issues are, and how to perform single-subject-level and group-level analyses. Researchers who are familiar with using automated programs to perform advanced analyses will learn what happens when they click the “analyze now” button. The book provides sample data and downloadable Matlab code. Each of the 38 chapters covers one analysis topic, and these topics progress from simple to advanced. Most chapters conclude with exercises that further develop the material covered in the chapter. Many of the methods presented (including convolution, the Fourier transform, and Euler's formula) are fundamental and form the groundwork for other advanced data analysis methods. Readers who master the methods in the book will be well prepared to learn other approaches.
Download or read book An Introductory Course in Computational Neuroscience written by Paul Miller and published by MIT Press. This book was released on 2018-10-09 with total page 405 pages. Available in PDF, EPUB and Kindle. Book excerpt: A textbook for students with limited background in mathematics and computer coding, emphasizing computer tutorials that guide readers in producing models of neural behavior. This introductory text teaches students to understand, simulate, and analyze the complex behaviors of individual neurons and brain circuits. It is built around computer tutorials that guide students in producing models of neural behavior, with the associated Matlab code freely available online. From these models students learn how individual neurons function and how, when connected, neurons cooperate in a circuit. The book demonstrates through simulated models how oscillations, multistability, post-stimulus rebounds, and chaos can arise within either single neurons or circuits, and it explores their roles in the brain. The book first presents essential background in neuroscience, physics, mathematics, and Matlab, with explanations illustrated by many example problems. Subsequent chapters cover the neuron and spike production; single spike trains and the underlying cognitive processes; conductance-based models; the simulation of synaptic connections; firing-rate models of large-scale circuit operation; dynamical systems and their components; synaptic plasticity; and techniques for analysis of neuron population datasets, including principal components analysis, hidden Markov modeling, and Bayesian decoding. Accessible to undergraduates in life sciences with limited background in mathematics and computer coding, the book can be used in a “flipped” or “inverted” teaching approach, with class time devoted to hands-on work on the computer tutorials. It can also be a resource for graduate students in the life sciences who wish to gain computing skills and a deeper knowledge of neural function and neural circuits.
Download or read book Neural Data Science written by Erik Lee Nylen and published by Academic Press. This book was released on 2017-02-24 with total page 370 pages. Available in PDF, EPUB and Kindle. Book excerpt: A Primer with MATLAB® and PythonTM present important information on the emergence of the use of Python, a more general purpose option to MATLAB, the preferred computation language for scientific computing and analysis in neuroscience. This book addresses the snake in the room by providing a beginner's introduction to the principles of computation and data analysis in neuroscience, using both Python and MATLAB, giving readers the ability to transcend platform tribalism and enable coding versatility. - Includes discussions of both MATLAB and Python in parallel - Introduces the canonical data analysis cascade, standardizing the data analysis flow - Presents tactics that strategically, tactically, and algorithmically help improve the organization of code
Download or read book Calculus for Cognitive Scientists written by James K. Peterson and published by Springer. This book was released on 2016-02-04 with total page 519 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides a self-study program on how mathematics, computer science and science can be usefully and seamlessly intertwined. Learning to use ideas from mathematics and computation is essential for understanding approaches to cognitive and biological science. As such the book covers calculus on one variable and two variables and works through a number of interesting first-order ODE models. It clearly uses MatLab in computational exercises where the models cannot be solved by hand, and also helps readers to understand that approximations cause errors – a fact that must always be kept in mind.
Download or read book An Introduction to MATLAB for Behavioral Researchers written by Christopher R. Madan and published by SAGE Publications. This book was released on 2013-12-18 with total page 281 pages. Available in PDF, EPUB and Kindle. Book excerpt: MATLAB is a powerful data analysis program, but many behavioral science researchers find it too daunting to learn and use. An Introduction to MATLAB for Behavioral Researchers is an easy-to-understand, hands-on guide for behavioral researchers who have no prior programming experience. Written in a conversational and non-intimidating style, the author walks students—step by step—through analyzing real experimental data. Topics covered include the basics of programming, the implementation of simple behavioral analyses, and how to make publication-ready figures. More advanced topics such as pseudo-randomization of trial sequences to meet specified criteria and working with psycholinguistic data are also covered. Interesting behavioral science examples and datasets from published studies, such as visualizing fixation patterns in eye-tracking studies and animal search behavior in two-dimensional space, help develop an intuition for data analysis, which is essential and can only be developed when working with real research problems and real data.
Download or read book Principles of Computational Modelling in Neuroscience written by David Sterratt and published by Cambridge University Press. This book was released on 2023-10-05 with total page 553 pages. Available in PDF, EPUB and Kindle. Book excerpt: Learn to use computational modelling techniques to understand the nervous system at all levels, from ion channels to networks.
Download or read book MATLAB for Psychologists written by Mauro Borgo and published by Springer Science & Business Media. This book was released on 2012-03-24 with total page 294 pages. Available in PDF, EPUB and Kindle. Book excerpt: The matrix laboratory interactive computing environment—MATLAB—has brought creativity to research in diverse disciplines, particularly in designing and programming experiments. More commonly used in mathematics and the sciences, it also lends itself to a variety of applications across the field of psychology. For the novice looking to use it in experimental psychology research, though, becoming familiar with MATLAB can be a daunting task. MATLAB for Psychologists expertly guides readers through the component steps, skills, and operations of the software, with plentiful graphics and examples to match the reader’s comfort level. Using an extended illustration, this concise volume explains the program’s usefulness at any point in an experiment, without the limits imposed by other types of software. And the authors demonstrate the responsiveness of MATLAB to the individual’s research needs, whether the task is programming experiments, creating sensory stimuli, running simulations, or calculating statistics for data analysis. Key features of the coverage: Thinking in a matrix way. Handling and plotting data. Guidelines for improved programming, sound, and imaging. Statistical analysis and signal detection theory indexes. The Graphical User Interface. The Psychophysics Toolbox. MATLAB for Psychologists serves a wide audience of advanced undergraduate and graduate level psychology students, professors, and researchers as well as lab technicians involved in programming psychology experiments.
Download or read book Fundamentals of Computational Neuroscience written by Thomas Trappenberg and published by Oxford University Press. This book was released on 2010 with total page 417 pages. Available in PDF, EPUB and Kindle. Book excerpt: The new edition of Fundamentals of Computational Neuroscience build on the success and strengths of the first edition. Completely redesigned and revised, it introduces the theoretical foundations of neuroscience with a focus on the nature of information processing in the brain.
Download or read book Radical Embodied Cognitive Science written by Anthony Chemero and published by MIT Press. This book was released on 2011-08-19 with total page 269 pages. Available in PDF, EPUB and Kindle. Book excerpt: A proposal for a new way to do cognitive science argues that cognition should be described in terms of agent-environment dynamics rather than computation and representation. While philosophers of mind have been arguing over the status of mental representations in cognitive science, cognitive scientists have been quietly engaged in studying perception, action, and cognition without explaining them in terms of mental representation. In this book, Anthony Chemero describes this nonrepresentational approach (which he terms radical embodied cognitive science), puts it in historical and conceptual context, and applies it to traditional problems in the philosophy of mind. Radical embodied cognitive science is a direct descendant of the American naturalist psychology of William James and John Dewey, and follows them in viewing perception and cognition to be understandable only in terms of action in the environment. Chemero argues that cognition should be described in terms of agent-environment dynamics rather than in terms of computation and representation. After outlining this orientation to cognition, Chemero proposes a methodology: dynamical systems theory, which would explain things dynamically and without reference to representation. He also advances a background theory: Gibsonian ecological psychology, “shored up” and clarified. Chemero then looks at some traditional philosophical problems (reductionism, epistemological skepticism, metaphysical realism, consciousness) through the lens of radical embodied cognitive science and concludes that the comparative ease with which it resolves these problems, combined with its empirical promise, makes this approach to cognitive science a rewarding one. “Jerry Fodor is my favorite philosopher,” Chemero writes in his preface, adding, “I think that Jerry Fodor is wrong about nearly everything.” With this book, Chemero explains nonrepresentational, dynamical, ecological cognitive science as clearly and as rigorously as Jerry Fodor explained computational cognitive science in his classic work The Language of Thought.
Download or read book An Introduction to the Event Related Potential Technique second edition written by Steven J. Luck and published by MIT Press. This book was released on 2014-05-30 with total page 417 pages. Available in PDF, EPUB and Kindle. Book excerpt: An essential guide to designing, conducting, and analyzing event-related potential (ERP) experiments, completely updated for this edition. The event-related potential (ERP) technique, in which neural responses to specific events are extracted from the EEG, provides a powerful noninvasive tool for exploring the human brain. This volume describes practical methods for ERP research along with the underlying theoretical rationale. It offers researchers and students an essential guide to designing, conducting, and analyzing ERP experiments. This second edition has been completely updated, with additional material, new chapters, and more accessible explanations. Freely available supplementary material, including several online-only chapters, offer expanded or advanced treatment of selected topics. The first half of the book presents essential background information, describing the origins of ERPs, the nature of ERP components, and the design of ERP experiments. The second half of the book offers a detailed treatment of the main steps involved in conducting ERP experiments, covering such topics as recording the EEG, filtering the EEG and ERP waveforms, and quantifying amplitudes and latencies. Throughout, the emphasis is on rigorous experimental design and relatively simple analyses. New material in the second edition includes entire chapters devoted to components, artifacts, measuring amplitudes and latencies, and statistical analysis; updated coverage of recording technologies; concrete examples of experimental design; and many more figures. Online chapters cover such topics as overlap, localization, writing and reviewing ERP papers, and setting up and running an ERP lab.
Download or read book Cognitive Science written by Jay Friedenberg and published by SAGE Publications. This book was released on 2015-09-23 with total page 829 pages. Available in PDF, EPUB and Kindle. Book excerpt: In Cognitive Science 3e Friedenberg and Silverman provide a solid understanding of the major theoretical and empirical contributions of cognitive science. Their text, thoroughly updated for this new third edition, describes the major theories of mind as well as the major experimental results that have emerged within each cognitive science discipline. Throughout history, different fields of inquiry have attempted to understand the great mystery of mind and answer questions like: What is the mind? How do we see, think, and remember? Can we create machines that are conscious and capable of self-awareness? This books examines these questions and many more. Focusing on the approach of a particular cognitive science field in each chapter, the authors describe its methodology, theoretical perspective, and findings and then offer a critical evaluation of the field. Features: Offers a wide-ranging, comprehensive, and multidisciplinary introduction to the field of cognitive science and issues of mind. Interdisciplinary Crossroads” sections at the end of each chapter focus on research topics that have been investigated from multiple perspectives, helping students to understand the link between varying disciplines and cognitive science. End-of-chapter “Summing Up” sections provide a concise summary of the major points addressed in each chapter to facilitate student comprehension and exam preparation “Explore More” sections link students to the Student Study Site where the authors have provided activities to help students more quickly master course content and prepare for examinations Supplements: A password-protected Instructor’s Resource contains PowerPoint lectures, a test bank and other pedagogical material.The book's Study Site features Web links, E-flash cards, and interactive quizzes.
Download or read book Brain Arousal and Information Theory written by Donald W PFAFF and published by Harvard University Press. This book was released on 2009-06-30 with total page 216 pages. Available in PDF, EPUB and Kindle. Book excerpt: Arousal is fundamental to all cognition. It is intuitively obvious, absolutely necessary, but what exactly is it? In Brain Arousal and Information Theory, Donald Pfaff presents a daring perspective on this long-standing puzzle. Pfaff argues that, beneath our mental functions and emotional dispositions, a primitive neuronal system governs arousal. Employing the simple but powerful framework of information theory, Pfaff revolutionizes our understanding of arousal systems in the brain. Starting with a review of the neuroanatomical, neurophysiological, and neurochemical components of arousal, Pfaff asks us to look at the gene networks and neural pathways underlying the brain's arousal systems much as a design engineer would contemplate information systems. This allows Pfaff to postulate that there is a bilaterally symmetric, bipolar system universal among mammals that readies the animal or the human being to respond to stimuli, initiate voluntary locomotion, and react to emotional challenges. Applying his hypothesis to heightened states of arousal--sex and fear--Pfaff shows us how his theory opens new scientific approaches to understanding the structure of brain arousal. A major synthesis of disparate data by a preeminent neuroscientist, Brain Arousal and Information Theory challenges current thinking about cognition and behavior. Whether you subscribe to Pfaff's theory or not, this book will stimulate debate about the nature of arousal itself.
Download or read book From Neuron to Cognition via Computational Neuroscience written by Michael A. Arbib and published by MIT Press. This book was released on 2016-11-04 with total page 810 pages. Available in PDF, EPUB and Kindle. Book excerpt: A comprehensive, integrated, and accessible textbook presenting core neuroscientific topics from a computational perspective, tracing a path from cells and circuits to behavior and cognition. This textbook presents a wide range of subjects in neuroscience from a computational perspective. It offers a comprehensive, integrated introduction to core topics, using computational tools to trace a path from neurons and circuits to behavior and cognition. Moreover, the chapters show how computational neuroscience—methods for modeling the causal interactions underlying neural systems—complements empirical research in advancing the understanding of brain and behavior. The chapters—all by leaders in the field, and carefully integrated by the editors—cover such subjects as action and motor control; neuroplasticity, neuromodulation, and reinforcement learning; vision; and language—the core of human cognition. The book can be used for advanced undergraduate or graduate level courses. It presents all necessary background in neuroscience beyond basic facts about neurons and synapses and general ideas about the structure and function of the human brain. Students should be familiar with differential equations and probability theory, and be able to pick up the basics of programming in MATLAB and/or Python. Slides, exercises, and other ancillary materials are freely available online, and many of the models described in the chapters are documented in the brain operation database, BODB (which is also described in a book chapter). Contributors Michael A. Arbib, Joseph Ayers, James Bednar, Andrej Bicanski, James J. Bonaiuto, Nicolas Brunel, Jean-Marie Cabelguen, Carmen Canavier, Angelo Cangelosi, Richard P. Cooper, Carlos R. Cortes, Nathaniel Daw, Paul Dean, Peter Ford Dominey, Pierre Enel, Jean-Marc Fellous, Stefano Fusi, Wulfram Gerstner, Frank Grasso, Jacqueline A. Griego, Ziad M. Hafed, Michael E. Hasselmo, Auke Ijspeert, Stephanie Jones, Daniel Kersten, Jeremie Knuesel, Owen Lewis, William W. Lytton, Tomaso Poggio, John Porrill, Tony J. Prescott, John Rinzel, Edmund Rolls, Jonathan Rubin, Nicolas Schweighofer, Mohamed A. Sherif, Malle A. Tagamets, Paul F. M. J. Verschure, Nathan Vierling-Claasen, Xiao-Jing Wang, Christopher Williams, Ransom Winder, Alan L. Yuille
Download or read book Cerebral Cortex written by Edmund T. Rolls and published by Oxford University Press. This book was released on 2016 with total page 979 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides insights into the principles of operation of the cerebral cortex. These principles are key to understanding how we, as humans, function. The book includes Appendices on the operation of many of the neuronal networks described in the book, together with simulation software written in Matlab.
Download or read book Control Computer Engineering and Neuroscience written by Szczepan Paszkiel and published by Springer Nature. This book was released on 2021-03-29 with total page 348 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents the proceedings of the 4th International Scientific Conference IC BCI 2021 Opole, Poland. The event was held at Opole University of Technology in Poland on 21 September 2021. Since 2014, the conference has taken place every two years at the University’s Faculty of Electrical Engineering, Automatic Control and Informatics. The conference focused on the issues relating to new trends in modern brain–computer interfaces (BCI) and control engineering, including neurobiology–neurosurgery, cognitive science–bioethics, biophysics–biochemistry, modeling–neuroinformatics, BCI technology, biomedical engineering, control and robotics, computer engineering and neurorehabilitation–biofeedback.
