Download or read book Unsupervised Learning Approaches for Dimensionality Reduction and Data Visualization written by B.K. Tripathy and published by CRC Press. This book was released on 2021-09-01 with total page 174 pages. Available in PDF, EPUB and Kindle. Book excerpt: Unsupervised Learning Approaches for Dimensionality Reduction and Data Visualization describes such algorithms as Locally Linear Embedding (LLE), Laplacian Eigenmaps, Isomap, Semidefinite Embedding, and t-SNE to resolve the problem of dimensionality reduction in the case of non-linear relationships within the data. Underlying mathematical concepts, derivations, and proofs with logical explanations for these algorithms are discussed, including strengths and limitations. The book highlights important use cases of these algorithms and provides examples along with visualizations. Comparative study of the algorithms is presented to give a clear idea on selecting the best suitable algorithm for a given dataset for efficient dimensionality reduction and data visualization. FEATURES Demonstrates how unsupervised learning approaches can be used for dimensionality reduction Neatly explains algorithms with a focus on the fundamentals and underlying mathematical concepts Describes the comparative study of the algorithms and discusses when and where each algorithm is best suitable for use Provides use cases, illustrative examples, and visualizations of each algorithm Helps visualize and create compact representations of high dimensional and intricate data for various real-world applications and data analysis This book is aimed at professionals, graduate students, and researchers in Computer Science and Engineering, Data Science, Machine Learning, Computer Vision, Data Mining, Deep Learning, Sensor Data Filtering, Feature Extraction for Control Systems, and Medical Instruments Input Extraction.

Download or read book Principal Manifolds for Data Visualization and Dimension Reduction written by Alexander N. Gorban and published by Springer Science & Business Media. This book was released on 2007-09-11 with total page 361 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book starts with the quote of the classical Pearson definition of PCA and includes reviews of various methods: NLPCA, ICA, MDS, embedding and clustering algorithms, principal manifolds and SOM. New approaches to NLPCA, principal manifolds, branching principal components and topology preserving mappings are described. Presentation of algorithms is supplemented by case studies. The volume ends with a tutorial PCA deciphers genome.

Download or read book Computational Genomics with R written by Altuna Akalin and published by CRC Press. This book was released on 2020-12-16 with total page 462 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computational Genomics with R provides a starting point for beginners in genomic data analysis and also guides more advanced practitioners to sophisticated data analysis techniques in genomics. The book covers topics from R programming, to machine learning and statistics, to the latest genomic data analysis techniques. The text provides accessible information and explanations, always with the genomics context in the background. This also contains practical and well-documented examples in R so readers can analyze their data by simply reusing the code presented. As the field of computational genomics is interdisciplinary, it requires different starting points for people with different backgrounds. For example, a biologist might skip sections on basic genome biology and start with R programming, whereas a computer scientist might want to start with genome biology. After reading: You will have the basics of R and be able to dive right into specialized uses of R for computational genomics such as using Bioconductor packages. You will be familiar with statistics, supervised and unsupervised learning techniques that are important in data modeling, and exploratory analysis of high-dimensional data. You will understand genomic intervals and operations on them that are used for tasks such as aligned read counting and genomic feature annotation. You will know the basics of processing and quality checking high-throughput sequencing data. You will be able to do sequence analysis, such as calculating GC content for parts of a genome or finding transcription factor binding sites. You will know about visualization techniques used in genomics, such as heatmaps, meta-gene plots, and genomic track visualization. You will be familiar with analysis of different high-throughput sequencing data sets, such as RNA-seq, ChIP-seq, and BS-seq. You will know basic techniques for integrating and interpreting multi-omics datasets. Altuna Akalin is a group leader and head of the Bioinformatics and Omics Data Science Platform at the Berlin Institute of Medical Systems Biology, Max Delbrück Center, Berlin. He has been developing computational methods for analyzing and integrating large-scale genomics data sets since 2002. He has published an extensive body of work in this area. The framework for this book grew out of the yearly computational genomics courses he has been organizing and teaching since 2015.

Download or read book Visual Knowledge Discovery and Machine Learning written by Boris Kovalerchuk and published by Springer. This book was released on 2018-01-17 with total page 317 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book combines the advantages of high-dimensional data visualization and machine learning in the context of identifying complex n-D data patterns. It vastly expands the class of reversible lossless 2-D and 3-D visualization methods, which preserve the n-D information. This class of visual representations, called the General Lines Coordinates (GLCs), is accompanied by a set of algorithms for n-D data classification, clustering, dimension reduction, and Pareto optimization. The mathematical and theoretical analyses and methodology of GLC are included, and the usefulness of this new approach is demonstrated in multiple case studies. These include the Challenger disaster, world hunger data, health monitoring, image processing, text classification, market forecasts for a currency exchange rate, computer-aided medical diagnostics, and others. As such, the book offers a unique resource for students, researchers, and practitioners in the emerging field of Data Science.

Download or read book Data Science Revealed written by Tshepo Chris Nokeri and published by . This book was released on 2021 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Get insight into data science techniques such as data engineering and visualization, statistical modeling, machine learning, and deep learning. This book teaches you how to select variables, optimize hyper parameters, develop pipelines, and train, test, and validate machine and deep learning models. Each chapter includes a set of examples allowing you to understand the concepts, assumptions, and procedures behind each model. The book covers parametric methods or linear models that combat under- or over-fitting using techniques such as Lasso and Ridge. It includes complex regression analysis with time series smoothing, decomposition, and forecasting. It takes a fresh look at non-parametric models for binary classification (logistic regression analysis) and ensemble methods such as decision trees, support vector machines, and naive Bayes. It covers the most popular non-parametric method for time-event data (the Kaplan-Meier estimator). It also covers ways of solving classification problems using artificial neural networks such as restricted Boltzmann machines, multi-layer perceptrons, and deep belief networks. The book discusses unsupervised learning clustering techniques such as the K-means method, agglomerative and Dbscan approaches, and dimension reduction techniques such as Feature Importance, Principal Component Analysis, and Linear Discriminant Analysis. And it introduces driverless artificial intelligence using H2O. After reading this book, you will be able to develop, test, validate, and optimize statistical machine learning and deep learning models, and engineer, visualize, and interpret sets of data. You will: Design, develop, train, and validate machine learning and deep learning models Find optimal hyper parameters for superior model performance Improve model performance using techniques such as dimension reduction and regularization Extract meaningful insights for decision making using data visualization.

Download or read book Nonlinear Dimensionality Reduction written by John A. Lee and published by Springer Science & Business Media. This book was released on 2007-10-31 with total page 316 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes established and advanced methods for reducing the dimensionality of numerical databases. Each description starts from intuitive ideas, develops the necessary mathematical details, and ends by outlining the algorithmic implementation. The text provides a lucid summary of facts and concepts relating to well-known methods as well as recent developments in nonlinear dimensionality reduction. Methods are all described from a unifying point of view, which helps to highlight their respective strengths and shortcomings. The presentation will appeal to statisticians, computer scientists and data analysts, and other practitioners having a basic background in statistics or computational learning.

Download or read book Computational Learning Approaches to Data Analytics in Biomedical Applications written by Khalid Al-Jabery and published by Academic Press. This book was released on 2019-11-20 with total page 312 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computational Learning Approaches to Data Analytics in Biomedical Applications provides a unified framework for biomedical data analysis using varied machine learning and statistical techniques. It presents insights on biomedical data processing, innovative clustering algorithms and techniques, and connections between statistical analysis and clustering. The book introduces and discusses the major problems relating to data analytics, provides a review of influential and state-of-the-art learning algorithms for biomedical applications, reviews cluster validity indices and how to select the appropriate index, and includes an overview of statistical methods that can be applied to increase confidence in the clustering framework and analysis of the results obtained. Includes an overview of data analytics in biomedical applications and current challenges Updates on the latest research in supervised learning algorithms and applications, clustering algorithms and cluster validation indices Provides complete coverage of computational and statistical analysis tools for biomedical data analysis Presents hands-on training on the use of Python libraries, MATLAB® tools, WEKA, SAP-HANA and R/Bioconductor

Download or read book Modern Dimension Reduction written by Philip D. Waggoner and published by Cambridge University Press. This book was released on 2021-08-05 with total page 98 pages. Available in PDF, EPUB and Kindle. Book excerpt: Data are not only ubiquitous in society, but are increasingly complex both in size and dimensionality. Dimension reduction offers researchers and scholars the ability to make such complex, high dimensional data spaces simpler and more manageable. This Element offers readers a suite of modern unsupervised dimension reduction techniques along with hundreds of lines of R code, to efficiently represent the original high dimensional data space in a simplified, lower dimensional subspace. Launching from the earliest dimension reduction technique principal components analysis and using real social science data, I introduce and walk readers through application of the following techniques: locally linear embedding, t-distributed stochastic neighbor embedding (t-SNE), uniform manifold approximation and projection, self-organizing maps, and deep autoencoders. The result is a well-stocked toolbox of unsupervised algorithms for tackling the complexities of high dimensional data so common in modern society. All code is publicly accessible on Github.

Download or read book Dimensionality Reduction with Unsupervised Nearest Neighbors written by Oliver Kramer and published by Springer Science & Business Media. This book was released on 2013-05-30 with total page 137 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is devoted to a novel approach for dimensionality reduction based on the famous nearest neighbor method that is a powerful classification and regression approach. It starts with an introduction to machine learning concepts and a real-world application from the energy domain. Then, unsupervised nearest neighbors (UNN) is introduced as efficient iterative method for dimensionality reduction. Various UNN models are developed step by step, reaching from a simple iterative strategy for discrete latent spaces to a stochastic kernel-based algorithm for learning submanifolds with independent parameterizations. Extensions that allow the embedding of incomplete and noisy patterns are introduced. Various optimization approaches are compared, from evolutionary to swarm-based heuristics. Experimental comparisons to related methodologies taking into account artificial test data sets and also real-world data demonstrate the behavior of UNN in practical scenarios. The book contains numerous color figures to illustrate the introduced concepts and to highlight the experimental results.

Download or read book Data Mining and Data Visualization written by and published by Elsevier. This book was released on 2005-05-02 with total page 660 pages. Available in PDF, EPUB and Kindle. Book excerpt: Data Mining and Data Visualization focuses on dealing with large-scale data, a field commonly referred to as data mining. The book is divided into three sections. The first deals with an introduction to statistical aspects of data mining and machine learning and includes applications to text analysis, computer intrusion detection, and hiding of information in digital files. The second section focuses on a variety of statistical methodologies that have proven to be effective in data mining applications. These include clustering, classification, multivariate density estimation, tree-based methods, pattern recognition, outlier detection, genetic algorithms, and dimensionality reduction. The third section focuses on data visualization and covers issues of visualization of high-dimensional data, novel graphical techniques with a focus on human factors, interactive graphics, and data visualization using virtual reality. This book represents a thorough cross section of internationally renowned thinkers who are inventing methods for dealing with a new data paradigm. Distinguished contributors who are international experts in aspects of data mining Includes data mining approaches to non-numerical data mining including text data, Internet traffic data, and geographic data Highly topical discussions reflecting current thinking on contemporary technical issues, e.g. streaming data Discusses taxonomy of dataset sizes, computational complexity, and scalability usually ignored in most discussions Thorough discussion of data visualization issues blending statistical, human factors, and computational insights

Download or read book Neural Network Machine Learning and Dimension Reduction for Data Visualization written by National Aeronautics and Space Administration (NASA) and published by Createspace Independent Publishing Platform. This book was released on 2018-05-22 with total page 32 pages. Available in PDF, EPUB and Kindle. Book excerpt: Neural network machine learning in computer science is a continuously developing field of study. Although neural network models have been developed which can accurately predict a numeric value or nominal classification, a general purpose method for constructing neural network architecture has yet to be developed. Computer scientists are often forced to rely on a trial-and-error process of developing and improving accurate neural network models. In many cases, models are constructed from a large number of input parameters. Understanding which input parameters have the greatest impact on the prediction of the model is often difficult to surmise, especially when the number of input variables is very high. This challenge is often labeled the "curse of dimensionality" in scientific fields. However, techniques exist for reducing the dimensionality of problems to just two dimensions. Once a problem's dimensions have been mapped to two dimensions, it can be easily plotted and understood by humans. The ability to visualize a multi-dimensional dataset can provide a means of identifying which input variables have the highest effect on determining a nominal or numeric output. Identifying these variables can provide a better means of training neural network models; models can be more easily and quickly trained using only input variables which appear to affect the outcome variable. The purpose of this project is to explore varying means of training neural networks and to utilize dimensional reduction for visualizing and understanding complex datasets. Liles, Charles A. Langley Research Center NEURAL NETS; MACHINE LEARNING; MATHEMATICAL MODELS; ATMOSPHERIC ENTRY; ATMOSPHERIC ENTRY SIMULATION; ACCURACY; PRINCIPAL COMPONENTS ANALYSIS; STOCHASTIC PROCESSES; APPLICATIONS PROGRAMS (COMPUTERS); PERFORMANCE PREDICTION; CRASHWORTHINESS; SCIENTIFIC VISUALIZATION; HYPERCUBE MULTIPROCESSORS

Download or read book Sufficient Dimension Reduction written by Bing Li and published by CRC Press. This book was released on 2018-04-27 with total page 307 pages. Available in PDF, EPUB and Kindle. Book excerpt: Sufficient dimension reduction is a rapidly developing research field that has wide applications in regression diagnostics, data visualization, machine learning, genomics, image processing, pattern recognition, and medicine, because they are fields that produce large datasets with a large number of variables. Sufficient Dimension Reduction: Methods and Applications with R introduces the basic theories and the main methodologies, provides practical and easy-to-use algorithms and computer codes to implement these methodologies, and surveys the recent advances at the frontiers of this field. Features Provides comprehensive coverage of this emerging research field. Synthesizes a wide variety of dimension reduction methods under a few unifying principles such as projection in Hilbert spaces, kernel mapping, and von Mises expansion. Reflects most recent advances such as nonlinear sufficient dimension reduction, dimension folding for tensorial data, as well as sufficient dimension reduction for functional data. Includes a set of computer codes written in R that are easily implemented by the readers. Uses real data sets available online to illustrate the usage and power of the described methods. Sufficient dimension reduction has undergone momentous development in recent years, partly due to the increased demands for techniques to process high-dimensional data, a hallmark of our age of Big Data. This book will serve as the perfect entry into the field for the beginning researchers or a handy reference for the advanced ones. The author Bing Li obtained his Ph.D. from the University of Chicago. He is currently a Professor of Statistics at the Pennsylvania State University. His research interests cover sufficient dimension reduction, statistical graphical models, functional data analysis, machine learning, estimating equations and quasilikelihood, and robust statistics. He is a fellow of the Institute of Mathematical Statistics and the American Statistical Association. He is an Associate Editor for The Annals of Statistics and the Journal of the American Statistical Association.

Download or read book Multidimensional Data Visualization written by Gintautas Dzemyda and published by Springer Science & Business Media. This book was released on 2012-11-08 with total page 262 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book highlights recent developments in multidimensional data visualization, presenting both new methods and modifications on classic techniques. Throughout the book, various applications of multidimensional data visualization are presented including its uses in social sciences (economy, education, politics, psychology), environmetrics, and medicine (ophthalmology, sport medicine, pharmacology, sleep medicine). The book provides recent research results in optimization-based visualization. Evolutionary algorithms and a two-level optimization method, based on combinatorial optimization and quadratic programming, are analyzed in detail. The performance of these algorithms and the development of parallel versions are discussed. The utilization of new visualization techniques to improve the capabilies of artificial neural networks (self-organizing maps, feed-forward networks) is also discussed. The book includes over 100 detailed images presenting examples of the many different visualization techniques that the book presents. This book is intended for scientists and researchers in any field of study where complex and multidimensional data must be represented visually.

Download or read book Graph Based Clustering and Data Visualization Algorithms written by Ágnes Vathy-Fogarassy and published by Springer Science & Business Media. This book was released on 2013-05-24 with total page 120 pages. Available in PDF, EPUB and Kindle. Book excerpt: This work presents a data visualization technique that combines graph-based topology representation and dimensionality reduction methods to visualize the intrinsic data structure in a low-dimensional vector space. The application of graphs in clustering and visualization has several advantages. A graph of important edges (where edges characterize relations and weights represent similarities or distances) provides a compact representation of the entire complex data set. This text describes clustering and visualization methods that are able to utilize information hidden in these graphs, based on the synergistic combination of clustering, graph-theory, neural networks, data visualization, dimensionality reduction, fuzzy methods, and topology learning. The work contains numerous examples to aid in the understanding and implementation of the proposed algorithms, supported by a MATLAB toolbox available at an associated website.

Download or read book Elements of Dimensionality Reduction and Manifold Learning written by Benyamin Ghojogh and published by Springer Nature. This book was released on 2023-02-02 with total page 617 pages. Available in PDF, EPUB and Kindle. Book excerpt: Dimensionality reduction, also known as manifold learning, is an area of machine learning used for extracting informative features from data for better representation of data or separation between classes. This book presents a cohesive review of linear and nonlinear dimensionality reduction and manifold learning. Three main aspects of dimensionality reduction are covered: spectral dimensionality reduction, probabilistic dimensionality reduction, and neural network-based dimensionality reduction, which have geometric, probabilistic, and information-theoretic points of view to dimensionality reduction, respectively. The necessary background and preliminaries on linear algebra, optimization, and kernels are also explained to ensure a comprehensive understanding of the algorithms. The tools introduced in this book can be applied to various applications involving feature extraction, image processing, computer vision, and signal processing. This book is applicable to a wide audience who would like to acquire a deep understanding of the various ways to extract, transform, and understand the structure of data. The intended audiences are academics, students, and industry professionals. Academic researchers and students can use this book as a textbook for machine learning and dimensionality reduction. Data scientists, machine learning scientists, computer vision scientists, and computer scientists can use this book as a reference. It can also be helpful to statisticians in the field of statistical learning and applied mathematicians in the fields of manifolds and subspace analysis. Industry professionals, including applied engineers, data engineers, and engineers in various fields of science dealing with machine learning, can use this as a guidebook for feature extraction from their data, as the raw data in industry often require preprocessing. The book is grounded in theory but provides thorough explanations and diverse examples to improve the reader’s comprehension of the advanced topics. Advanced methods are explained in a step-by-step manner so that readers of all levels can follow the reasoning and come to a deep understanding of the concepts. This book does not assume advanced theoretical background in machine learning and provides necessary background, although an undergraduate-level background in linear algebra and calculus is recommended.

Download or read book Data Preparation for Machine Learning written by Jason Brownlee and published by Machine Learning Mastery. This book was released on 2020-06-30 with total page 398 pages. Available in PDF, EPUB and Kindle. Book excerpt: Data preparation involves transforming raw data in to a form that can be modeled using machine learning algorithms. Cut through the equations, Greek letters, and confusion, and discover the specialized data preparation techniques that you need to know to get the most out of your data on your next project. Using clear explanations, standard Python libraries, and step-by-step tutorial lessons, you will discover how to confidently and effectively prepare your data for predictive modeling with machine learning.

Download or read book 50th Anniversary of the Metaphorical Butterfly Effect since Lorenz 1972 written by Bo-Wen Shen and published by MDPI AG. This book was released on 2023-10-11 with total page 338 pages. Available in PDF, EPUB and Kindle. Book excerpt: Celebrate the 50th anniversary of the metaphorical butterfly effect, born from Edward Lorenz's 1963 work on initial condition sensitivity. In 1972, it became a metaphor for illustrating how minor changes could yield an organized system. Lorenz Models: Chaos & Regime Changes Explore Lorenz models' 1960-2008 evolution, chaos theory, and attractors. Unraveling High-dimensional Instability Challenge norms in "Butterfly Effect without Chaos?" as non-chaotic elements contribute uniquely. Modeling Atmospheric Dynamics Delve into atmospheric dynamics via "Storm Sensitivity Study." Navigating Data Assimilation Explore data assimilation's dance in chaotic and nonchaotic settings via the observability Gramian. Chaos, Instability, Sensitivities Explore chaos, instability, and sensitivities with Lorenz 1963 & 1969 models. Unraveling Tropical Mysteries Investigate tropical atmospheric instability, uncovering oscillation origins and cloud-radiation interactions. Chaos and Order Enter atmospheric regimes, exploring attractor coexistence and predictability. The Art of Prediction Peer into predictability realms, tracing the "butterfly effect's" impact on predictions. Navigating Typhoons Journey through typhoons, exploring rainfall and typhoon trajectory prediction. Analyzing Sea Surface Temperature Examine nonlinear analysis for classification. Computational Fluid Dynamics Immerse in geophysical fluid dynamics progress, simulating atmospheric phenomena.