Download or read book Multivariate Data Integration Using R written by Kim-Anh Lê Cao and published by CRC Press. This book was released on 2021-11-08 with total page 316 pages. Available in PDF, EPUB and Kindle. Book excerpt: Large biological data, which are often noisy and high-dimensional, have become increasingly prevalent in biology and medicine. There is a real need for good training in statistics, from data exploration through to analysis and interpretation. This book provides an overview of statistical and dimension reduction methods for high-throughput biological data, with a specific focus on data integration. It starts with some biological background, key concepts underlying the multivariate methods, and then covers an array of methods implemented using the mixOmics package in R. Features: Provides a broad and accessible overview of methods for multi-omics data integration Covers a wide range of multivariate methods, each designed to answer specific biological questions Includes comprehensive visualisation techniques to aid in data interpretation Includes many worked examples and case studies using real data Includes reproducible R code for each multivariate method, using the mixOmics package The book is suitable for researchers from a wide range of scientific disciplines wishing to apply these methods to obtain new and deeper insights into biological mechanisms and biomedical problems. The suite of tools introduced in this book will enable students and scientists to work at the interface between, and provide critical collaborative expertise to, biologists, bioinformaticians, statisticians and clinicians.
Download or read book Multivariate Data Integration Using R written by Kim-Anh Lê Cao and published by . This book was released on 2022 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book An Introduction to Applied Multivariate Analysis with R written by Brian Everitt and published by Springer Science & Business Media. This book was released on 2011-04-23 with total page 284 pages. Available in PDF, EPUB and Kindle. Book excerpt: The majority of data sets collected by researchers in all disciplines are multivariate, meaning that several measurements, observations, or recordings are taken on each of the units in the data set. These units might be human subjects, archaeological artifacts, countries, or a vast variety of other things. In a few cases, it may be sensible to isolate each variable and study it separately, but in most instances all the variables need to be examined simultaneously in order to fully grasp the structure and key features of the data. For this purpose, one or another method of multivariate analysis might be helpful, and it is with such methods that this book is largely concerned. Multivariate analysis includes methods both for describing and exploring such data and for making formal inferences about them. The aim of all the techniques is, in general sense, to display or extract the signal in the data in the presence of noise and to find out what the data show us in the midst of their apparent chaos. An Introduction to Applied Multivariate Analysis with R explores the correct application of these methods so as to extract as much information as possible from the data at hand, particularly as some type of graphical representation, via the R software. Throughout the book, the authors give many examples of R code used to apply the multivariate techniques to multivariate data.
Download or read book A Handbook of Multivariate Data Analysis Using R written by Dr. A.K. Sheik Manzoor and published by Sultan Chand & Sons. This book was released on 2023-12-01 with total page 11 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book includes a broad range of analytical methods starting from multiple regression, discriminant analysis, logistic regression, and MANOVA, and progressing to various advanced multivariate techniques. It provides clear and easily comprehensible explanations for all twelve of these techniques, including the complex domain of structural equation modeling.
Download or read book Using R With Multivariate Statistics written by Randall E. Schumacker and published by SAGE Publications. This book was released on 2015-07-06 with total page 293 pages. Available in PDF, EPUB and Kindle. Book excerpt: Using R with Multivariate Statistics is a quick guide to using R, free-access software available for Windows and Mac operating systems that allows users to customize statistical analysis. Designed to serve as a companion to a more comprehensive text on multivariate statistics, this book helps students and researchers in the social and behavioral sciences get up to speed with using R. It provides data analysis examples, R code, computer output, and explanation of results for every multivariate statistical application included. In addition, R code for some of the data set examples used in more comprehensive texts is included, so students can run examples in R and compare results to those obtained using SAS, SPSS, or STATA. A unique feature of the book is the photographs and biographies of famous persons in the field of multivariate statistics.
Download or read book MULTIVARIATE DATA ANALYSIS written by NICK. FIELLER and published by . This book was released on 2019 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book An R and S Plus Companion to Multivariate Analysis written by Brian S. Everitt and published by Springer Science & Business Media. This book was released on 2006-03-30 with total page 232 pages. Available in PDF, EPUB and Kindle. Book excerpt: Applied statisticians often need to perform analyses of multivariate data; for these they will typically use one of the statistical software packages, S-Plus or R. This book sets out how to use these packages for these analyses in a concise and easy-to-use way, and will save users having to buy two books for the job. The author is well-known for this kind of book, and so buyers will trust that he’s got it right.
Download or read book Data Integration Manipulation and Visualization of Phylogenetic Trees written by Guangchuang Yu and published by CRC Press. This book was released on 2022-08-26 with total page 298 pages. Available in PDF, EPUB and Kindle. Book excerpt: Data Integration, Manipulation and Visualization of Phylogenetic Trees introduces and demonstrates data integration, manipulation and visualization of phylogenetic trees using a suite of R packages, tidytree, treeio, ggtree and ggtreeExtra. Using the most comprehensive packages for phylogenetic data integration and visualization, contains numerous examples that can be used for teaching and learning. Ideal for undergraduate readers and researchers with a working knowledge of R and ggplot2. Key Features: Manipulating phylogenetic tree with associated data using tidy verbs Integrating phylogenetic data from diverse sources Visualizing phylogenetic data using grammar of graphics
Download or read book Multivariate Data Analysis written by William W. Cooley and published by . This book was released on 1985 with total page 392 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book MULTIVARIATE DATA ANALYSIS written by R. Shanthi and published by MJP Publisher. This book was released on 2019-06-10 with total page 448 pages. Available in PDF, EPUB and Kindle. Book excerpt: Multivariate Data Analysis Introduction to SPSS Outliers Normality Test of Linearity Data Transformation Bootstrapping Homoscedasticity Introduction to IBM SPSS – AMOS Multivariate Analysis of Variance (MANOVA) One Way Manova in SPSS Multiple Regression Analysis Binary Logistic Regression Factor Analysis Exploratory Factor Analysis Confirmatory Factor Analysis Cluster Analysis K - Mean Cluster Analysis Hierarchical Cluster Analysis Discriminant Analysis Correspondence Analysis Multidimensional Scaling Example - Multidimensional Scaling (ALSCAL) Neural Network Decision Trees Path Analysis Structural Equation Modeling Canonical Correlation
Download or read book Modern Statistics with R written by Måns Thulin and published by CRC Press. This book was released on 2024-08-20 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: The past decades have transformed the world of statistical data analysis, with new methods, new types of data, and new computational tools. Modern Statistics with R introduces you to key parts of this modern statistical toolkit. It teaches you: Data wrangling - importing, formatting, reshaping, merging, and filtering data in R. Exploratory data analysis - using visualisations and multivariate techniques to explore datasets. Statistical inference - modern methods for testing hypotheses and computing confidence intervals. Predictive modelling - regression models and machine learning methods for prediction, classification, and forecasting. Simulation - using simulation techniques for sample size computations and evaluations of statistical methods. Ethics in statistics - ethical issues and good statistical practice. R programming - writing code that is fast, readable, and (hopefully!) free from bugs. No prior programming experience is necessary. Clear explanations and examples are provided to accommodate readers at all levels of familiarity with statistical principles and coding practices. A basic understanding of probability theory can enhance comprehension of certain concepts discussed within this book. In addition to plenty of examples, the book includes more than 200 exercises, with fully worked solutions available at: www.modernstatisticswithr.com.
Download or read book The Applied Genomic Epidemiology Handbook written by Allison Black and published by CRC Press. This book was released on 2024-03-18 with total page 165 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Applied Genomic Epidemiology Handbook: A Practical Guide to Leveraging Pathogen Genomic Data in Public Health provides rationale, theory, and implementation guidance to help public health practitioners incorporate pathogen genomic data analysis into their investigations. During the SARS-CoV-2 pandemic, viral whole genome sequences were generated, analyzed, and shared at an unprecedented scale. This wealth of data posed both tremendous opportunities and challenges; the data could be used to support varied parts of the public health response but could be hard for much of the public health workforce to analyze and interpret, given a historical lack of experience working with pathogen genomic data. This book addresses that gap. Structured into eight wide-ranging chapters, this book describes how the overlapping timescales of pathogen evolution and infection transmission enable exploration of epidemiologic dynamics from pathogen sequence data. Different approaches to sampling and genomic data inclusion are presented for different types of epidemiologic investigations. To support epidemiologists in diving into pathogen genomic data analysis, this book also introduces the analytic tools and approaches that are readily used in public health departments and presents case studies to show step-by-step how genomic data are used and evaluated in disease investigations. Despite the breadth of scientific literature that uses pathogen genomic data to investigate disease dynamics, there remains little practical guidance to help applied epidemiologists build their ability to explore epidemiologic questions with pathogen genomic data. This handbook was written to serve as that guide. Including case studies, common methods, and software tools, this book will be of great interest to public health microbiologists or lab directors, bioinformaticians, epidemiologists, health officers, academics, as well as students working in a public health context.
Download or read book Computational Intelligence for Oncology and Neurological Disorders written by Mrutyunjaya Panda and published by CRC Press. This book was released on 2024-07-15 with total page 292 pages. Available in PDF, EPUB and Kindle. Book excerpt: With the advent of computational intelligence-based approaches, such as bio-inspired techniques, and the availability of clinical data from various complex experiments, medical consultants, researchers, neurologists, and oncologists, there is huge scope for CI-based applications in medical oncology and neurological disorders. This book focuses on interdisciplinary research in this field, bringing together medical practitioners dealing with neurological disorders and medical oncology along with CI investigators. The book collects high-quality original contributions, containing the latest developments or applications of practical use and value, presenting interdisciplinary research and review articles in the field of intelligent systems for computational oncology and neurological disorders. Drawing from work across computer science, physics, mathematics, medical science, psychology, cognitive science, oncology, and neurobiology among others, it combines theoretical, applied, computational, experimental, and clinical research. It will be of great interest to any neurology or oncology researchers focused on computational approaches.
Download or read book Systems Medicine written by Uri Alon and published by CRC Press. This book was released on 2023-12-15 with total page 271 pages. Available in PDF, EPUB and Kindle. Book excerpt: Why do we get certain diseases, whereas other diseases do not exist? In this book, Alon, one of the founders of systems biology, builds a foundation for systems medicine. Starting from basic laws, the book derives why physiological circuits are built the way they are. The circuits have fragilities that explain specific diseases and offer new strategies to treat them. By the end, the reader will be able to use simple and powerful mathematical models to describe physiological circuits. The book explores, in three parts, hormone circuits, immune circuits, and aging and age-related disease. It culminates in a periodic table of diseases. Alon writes in a style accessible to a broad range of readers - undergraduates, graduates, or researchers from computational or biological backgrounds. The level of math is friendly and the math can even be bypassed altogether. For instructors and readers who want to go deeper, the book includes dozens of exercises that have been rigorously tested in the classroom
Download or read book Lattice written by Deepayan Sarkar and published by Springer Science & Business Media. This book was released on 2008-02-15 with total page 283 pages. Available in PDF, EPUB and Kindle. Book excerpt: Written by the author of the lattice system, this book describes lattice in considerable depth, beginning with the essentials and systematically delving into specific low levels details as necessary. No prior experience with lattice is required to read the book, although basic familiarity with R is assumed. The book contains close to 150 figures produced with lattice. Many of the examples emphasize principles of good graphical design; almost all use real data sets that are publicly available in various R packages. All code and figures in the book are also available online, along with supplementary material covering more advanced topics.
Download or read book Multi omic Data Integration in Oncology written by Chiara Romualdi and published by Frontiers Media SA. This book was released on 2020-12-03 with total page 187 pages. Available in PDF, EPUB and Kindle. Book excerpt: This eBook is a collection of articles from a Frontiers Research Topic. Frontiers Research Topics are very popular trademarks of the Frontiers Journals Series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area! Find out more on how to host your own Frontiers Research Topic or contribute to one as an author by contacting the Frontiers Editorial Office: frontiersin.org/about/contact.
Download or read book Omics Data Integration towards Mining of Phenotype Specific Biomarkers in Cancer Volume II written by Liang Cheng and published by Frontiers Media SA. This book was released on 2022-11-29 with total page 793 pages. Available in PDF, EPUB and Kindle. Book excerpt:
