Download or read book Open Source Software in Life Science Research written by Lee Harland and published by Elsevier. This book was released on 2012-10-31 with total page 583 pages. Available in PDF, EPUB and Kindle. Book excerpt: The free/open source approach has grown from a minor activity to become a significant producer of robust, task-orientated software for a wide variety of situations and applications. To life science informatics groups, these systems present an appealing proposition - high quality software at a very attractive price. Open source software in life science research considers how industry and applied research groups have embraced these resources, discussing practical implementations that address real-world business problems. The book is divided into four parts. Part one looks at laboratory data management and chemical informatics, covering software such as Bioclipse, OpenTox, ImageJ and KNIME. In part two, the focus turns to genomics and bioinformatics tools, with chapters examining GenomicsTools and EBI Atlas software, as well as the practicalities of setting up an ‘omics’ platform and managing large volumes of data. Chapters in part three examine information and knowledge management, covering a range of topics including software for web-based collaboration, open source search and visualisation technologies for scientific business applications, and specific software such as DesignTracker and Utopia Documents. Part four looks at semantic technologies such as Semantic MediaWiki, TripleMap and Chem2Bio2RDF, before part five examines clinical analytics, and validation and regulatory compliance of free/open source software. Finally, the book concludes by looking at future perspectives and the economics and free/open source software in industry. Discusses a broad range of applications from a variety of sectors Provides a unique perspective on work normally performed behind closed doors Highlights the criteria used to compare and assess different approaches to solving problems

Download or read book Nonautonomous Dynamical Systems written by Peter E. Kloeden and published by American Mathematical Soc.. This book was released on 2011-08-17 with total page 274 pages. Available in PDF, EPUB and Kindle. Book excerpt: The theory of nonautonomous dynamical systems in both of its formulations as processes and skew product flows is developed systematically in this book. The focus is on dissipative systems and nonautonomous attractors, in particular the recently introduced concept of pullback attractors. Linearization theory, invariant manifolds, Lyapunov functions, Morse decompositions and bifurcations for nonautonomous systems and set-valued generalizations are also considered as well as applications to numerical approximations, switching systems and synchronization. Parallels with corresponding theories of control and random dynamical systems are briefly sketched. With its clear and systematic exposition, many examples and exercises, as well as its interesting applications, this book can serve as a text at the beginning graduate level. It is also useful for those who wish to begin their own independent research in this rapidly developing area.

Download or read book Health Systems Science E Book written by Susan Skochelak and published by Elsevier Health Sciences. This book was released on 2020-05-06 with total page 352 pages. Available in PDF, EPUB and Kindle. Book excerpt: The first textbook devoted to this emerging area, Health Systems Science now brings you fully up to date with today’s key issues and solutions. This increasingly important branch of health care explores how health care is delivered, how health care professionals work together to deliver that care, and how the health system can improve patient care and health care delivery. Along with basic and clinical sciences, health systems science is rapidly becoming a crucial 'third pillar' of medical science, with an emphasis on understanding the role of human factors, systems engineering, leadership, and patient improvement strategies that will help transform the future of health care and ensure greater patient safety. In this 2nd Edition, new chapters, new exercises, and new information help you acquire the knowledge and skills you need for success in today’s challenging healthcare system. The first comprehensive text for mastering health systems science, offering practical coverage of all of the factors in the lives of patients that influence their well-being, the structures and processes of the health system itself, societal factors, communication, and information technology. NEW to this edition: New content on systems thinking, ethics and legal issues, and international care models further define and address this new important component of health care education; additional exercises; and expanded information on the patient experience and private practice. Complete coverage of patient safety, quality improvement, value in health care, teamwork, stewardship of health care resources, population health, clinical informatics, care coordination, leadership, and health care financing/reform. Patient improvement strategies incorporate checklists, information technology, team training, and more. A consistent chapter template provides clear coverage of each topic, including Learning Objectives, Chapter Outline, Core Chapter Content, Summary, Questions for Reflection, and Annotated Bibliography and References. Developed by the American Medical Association’s Accelerating Change in Medical Education Consortium, and authored by a team that includes AMA staff members working with individuals from the Consortium member schools.

Download or read book Large Scale Networks in Engineering and Life Sciences written by Peter Benner and published by Springer. This book was released on 2014-10-21 with total page 401 pages. Available in PDF, EPUB and Kindle. Book excerpt: This edited volume provides insights into and tools for the modeling, analysis, optimization, and control of large-scale networks in the life sciences and in engineering. Large-scale systems are often the result of networked interactions between a large number of subsystems, and their analysis and control are becoming increasingly important. The chapters of this book present the basic concepts and theoretical foundations of network theory and discuss its applications in different scientific areas such as biochemical reactions, chemical production processes, systems biology, electrical circuits, and mobile agents. The aim is to identify common concepts, to understand the underlying mathematical ideas, and to inspire discussions across the borders of the various disciplines. The book originates from the interdisciplinary summer school “Large Scale Networks in Engineering and Life Sciences” hosted by the International Max Planck Research School Magdeburg, September 26-30, 2011, and will therefore be of interest to mathematicians, engineers, physicists, biologists, chemists, and anyone involved in the network sciences. In particular, due to their introductory nature the chapters can serve individually or as a whole as the basis of graduate courses and seminars, future summer schools, or as reference material for practitioners in the network sciences.

Download or read book Microsystem Technology in Chemistry and Life Sciences written by Andreas Manz and published by Springer Science & Business Media. This book was released on 2003-09-05 with total page 269 pages. Available in PDF, EPUB and Kindle. Book excerpt: "WHAT DOES NOT NEED TO BE BIG, WILL BE SMALL", a word by an engineer at a recent conference on chips technology. This sentence is particularly true for chemistry. Microfabrication technology emerged from microelectronics into areas like mechanics and now chemistry and biology. The engineering of micron and submicron sized features on the surface of silicon, glass and polymers opens a whole new world. Micromotors smaller than human hair have been fabricated and they work fine. It is the declared goal of the authors to bring these different worlds together in this volume. Authors have been carefully chosen to guarantee for the quality of the contents. An engineer, a chemist or a biologist will find new impulses from the various chapters in this book.

Download or read book Mathematics for the Life Sciences written by Erin N. Bodine and published by Princeton University Press. This book was released on 2014-08-17 with total page 630 pages. Available in PDF, EPUB and Kindle. Book excerpt: An accessible undergraduate textbook on the essential math concepts used in the life sciences The life sciences deal with a vast array of problems at different spatial, temporal, and organizational scales. The mathematics necessary to describe, model, and analyze these problems is similarly diverse, incorporating quantitative techniques that are rarely taught in standard undergraduate courses. This textbook provides an accessible introduction to these critical mathematical concepts, linking them to biological observation and theory while also presenting the computational tools needed to address problems not readily investigated using mathematics alone. Proven in the classroom and requiring only a background in high school math, Mathematics for the Life Sciences doesn't just focus on calculus as do most other textbooks on the subject. It covers deterministic methods and those that incorporate uncertainty, problems in discrete and continuous time, probability, graphing and data analysis, matrix modeling, difference equations, differential equations, and much more. The book uses MATLAB throughout, explaining how to use it, write code, and connect models to data in examples chosen from across the life sciences. Provides undergraduate life science students with a succinct overview of major mathematical concepts that are essential for modern biology Covers all the major quantitative concepts that national reports have identified as the ideal components of an entry-level course for life science students Provides good background for the MCAT, which now includes data-based and statistical reasoning Explicitly links data and math modeling Includes end-of-chapter homework problems, end-of-unit student projects, and select answers to homework problems Uses MATLAB throughout, and MATLAB m-files with an R supplement are available online Prepares students to read with comprehension the growing quantitative literature across the life sciences A solutions manual for professors and an illustration package is available

Download or read book Validating Pharmaceutical Systems written by John Andrews and published by CRC Press. This book was released on 2005-08-03 with total page 576 pages. Available in PDF, EPUB and Kindle. Book excerpt: All too often, the words "computer validation" strike terror into the hearts of those new to the process and may even cause those familiar with it to tremble. Validating Pharmaceutical Systems: Good Computer Practice in Life Science Manufacturing delineates GCP, GLP, and GMP regulatory requirements and provides guidance from seasoned practitioners on how to fulfill them. John Andrews and his team tackle the perceived complexities surrounding the validation of a wide variety of automated systems. Sprinkled with case studies and real-life examples, the book offers a step-by-step review of topics such as planning, design, auditing, risk management, and specification. The in-depth, by example coverage demystifies the challenges of manufacturing execution systems(MES), laboratory information management systems(LIMS), and network qualification. The first section examines the different levels of automated systems used throughout the drug development, manufacture, and delivery lifecycle, using the GAMP 4 lifecycle approach to their validation. The second section uncovers some real-life applications of GAMP 4 to different areas of the regulations such as GLP, GCP, GMP, and GDP. The book explores some of the latest thinking on computer validation and reflects changes that have occurred in the industry since the early days of validation. The contributors are a deliberate blend of those who have faced the problems of the 1990s and the Y2K controversies and those who have more recently arrived on the scene and made an impact on the perception of validation of automated systems across the field of GxP. They do more than show you how to do the right thing; they show you how to do the right thing in compliance with regulations.

Download or read book Database Technology for Life Sciences and Medicine written by Claudia Plant and published by World Scientific. This book was released on 2010 with total page 389 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents innovative approaches from database researchers supporting the challenging process of knowledge discovery in biomedicine. Ranging from how to effectively store and organize biomedical data via data quality and case studies to sophisticated data mining methods, this book provides the state-of-the-art of database technology for life sciences and medicine. A valuable source of information for experts in life sciences who want to be updated about the possibilities of database technology in their field, this volume will also be inspiring for students and researchers in informatics who are keen to contribute to this emerging field of interdisciplinary research.

Download or read book Complex Systems Science in Biomedicine written by Thomas Deisboeck and published by Springer Science & Business Media. This book was released on 2007-06-13 with total page 857 pages. Available in PDF, EPUB and Kindle. Book excerpt: Complex Systems Science in Biomedicine Thomas S. Deisboeck and J. Yasha Kresh Complex Systems Science in Biomedicine covers the emerging field of systems science involving the application of physics, mathematics, engineering and computational methods and techniques to the study of biomedicine including nonlinear dynamics at the molecular, cellular, multi-cellular tissue, and organismic level. With all chapters helmed by leading scientists in the field, Complex Systems Science in Biomedicine's goal is to offer its audience a timely compendium of the ongoing research directed to the understanding of biological processes as whole systems instead of as isolated component parts. In Parts I & II, Complex Systems Science in Biomedicine provides a general systems thinking perspective and presents some of the fundamental theoretical underpinnings of this rapidly emerging field. Part III then follows with a multi-scaled approach, spanning from the molecular to macroscopic level, exemplified by studying such diverse areas as molecular networks and developmental processes, the immune and nervous systems, the heart, cancer and multi-organ failure. The volume concludes with Part IV that addresses methods and techniques driven in design and development by this new understanding of biomedical science. Key Topics Include: • Historic Perspectives of General Systems Thinking • Fundamental Methods and Techniques for Studying Complex Dynamical Systems • Applications from Molecular Networks to Disease Processes • Enabling Technologies for Exploration of Systems in the Life Sciences Complex Systems Science in Biomedicine is essential reading for experimental, theoretical, and interdisciplinary scientists working in the biomedical research field interested in a comprehensive overview of this rapidly emerging field. About the Editors: Thomas S. Deisboeck is currently Assistant Professor of Radiology at Massachusetts General Hospital and Harvard Medical School in Boston. An expert in interdisciplinary cancer modeling, Dr. Deisboeck is Director of the Complex Biosystems Modeling Laboratory which is part of the Harvard-MIT Martinos Center for Biomedical Imaging. J. Yasha Kresh is currently Professor of Cardiothoracic Surgery and Research Director, Professor of Medicine and Director of Cardiovascular Biophysics at the Drexel University College of Medicine. An expert in dynamical systems, he holds appointments in the School of Biomedical Engineering and Health Systems, Dept. of Mechanical Engineering and Molecular Pathobiology Program. Prof. Kresh is Fellow of the American College of Cardiology, American Heart Association, Biomedical Engineering Society, American Institute for Medical and Biological Engineering.

Download or read book The Systems View of Life written by Fritjof Capra and published by Cambridge University Press. This book was released on 2014-04-10 with total page 513 pages. Available in PDF, EPUB and Kindle. Book excerpt: The first volume to integrate life's biological, cognitive, social, and ecological dimensions into a single, coherent framework.

Download or read book Once Upon a Life Science Book 12 Interdisciplinary Activities to Create Confident Readers written by Jodi Wheeler-Toppen and published by NSTA Press. This book was released on 2010 with total page 170 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Globalization Biosecurity and the Future of the Life Sciences written by National Research Council and published by National Academies Press. This book was released on 2006-06-07 with total page 316 pages. Available in PDF, EPUB and Kindle. Book excerpt: Biomedical advances have made it possible to identify and manipulate features of living organisms in useful ways-leading to improvements in public health, agriculture, and other areas. The globalization of scientific and technical expertise also means that many scientists and other individuals around the world are generating breakthroughs in the life sciences and related technologies. The risks posed by bioterrorism and the proliferation of biological weapons capabilities have increased concern about how the rapid advances in genetic engineering and biotechnology could enable the production of biological weapons with unique and unpredictable characteristics. Globalization, Biosecurity, and the Future of Life Sciences examines current trends and future objectives of research in public health, life sciences, and biomedical science that contain applications relevant to developments in biological weapons 5 to 10 years into the future and ways to anticipate, identify, and mitigate these dangers.

Download or read book Mathematics for the Life Sciences written by Glenn Ledder and published by Springer Science & Business Media. This book was released on 2013-08-29 with total page 444 pages. Available in PDF, EPUB and Kindle. Book excerpt: ​ ​​ Mathematics for the Life Sciences provides present and future biologists with the mathematical concepts and tools needed to understand and use mathematical models and read advanced mathematical biology books. It presents mathematics in biological contexts, focusing on the central mathematical ideas, and providing detailed explanations. The author assumes no mathematics background beyond algebra and precalculus. Calculus is presented as a one-chapter primer that is suitable for readers who have not studied the subject before, as well as readers who have taken a calculus course and need a review. This primer is followed by a novel chapter on mathematical modeling that begins with discussions of biological data and the basic principles of modeling. The remainder of the chapter introduces the reader to topics in mechanistic modeling (deriving models from biological assumptions) and empirical modeling (using data to parameterize and select models). The modeling chapter contains a thorough treatment of key ideas and techniques that are often neglected in mathematics books. It also provides the reader with a sophisticated viewpoint and the essential background needed to make full use of the remainder of the book, which includes two chapters on probability and its applications to inferential statistics and three chapters on discrete and continuous dynamical systems. The biological content of the book is self-contained and includes many basic biology topics such as the genetic code, Mendelian genetics, population dynamics, predator-prey relationships, epidemiology, and immunology. The large number of problem sets include some drill problems along with a large number of case studies. The latter are divided into step-by-step problems and sorted into the appropriate section, allowing readers to gradually develop complete investigations from understanding the biological assumptions to a complete analysis.

Download or read book Deep Learning for the Life Sciences written by Bharath Ramsundar and published by O'Reilly Media. This book was released on 2019-04-10 with total page 236 pages. Available in PDF, EPUB and Kindle. Book excerpt: Deep learning has already achieved remarkable results in many fields. Now it’s making waves throughout the sciences broadly and the life sciences in particular. This practical book teaches developers and scientists how to use deep learning for genomics, chemistry, biophysics, microscopy, medical analysis, and other fields. Ideal for practicing developers and scientists ready to apply their skills to scientific applications such as biology, genetics, and drug discovery, this book introduces several deep network primitives. You’ll follow a case study on the problem of designing new therapeutics that ties together physics, chemistry, biology, and medicine—an example that represents one of science’s greatest challenges. Learn the basics of performing machine learning on molecular data Understand why deep learning is a powerful tool for genetics and genomics Apply deep learning to understand biophysical systems Get a brief introduction to machine learning with DeepChem Use deep learning to analyze microscopic images Analyze medical scans using deep learning techniques Learn about variational autoencoders and generative adversarial networks Interpret what your model is doing and how it’s working

Download or read book Mathematics for Life Science and Medicine written by Yasuhiro Takeuchi and published by Springer Science & Business Media. This book was released on 2007-01-25 with total page 232 pages. Available in PDF, EPUB and Kindle. Book excerpt: The purpose of this volume is to present and discuss the many rich properties of the dynamical systems that appear in life science and medicine. It provides a fascinating survey of the theory of dynamical systems in biology and medicine. Each chapter will serve to introduce students and scholars to the state-of-the-art in an exciting area, to present new results, and to inspire future contributions to mathematical modeling in life science and medicine.

Download or read book Life Science Data Mining written by Stephen T. C. Wong and published by World Scientific Publishing Company. This book was released on 2006 with total page 392 pages. Available in PDF, EPUB and Kindle. Book excerpt: This timely book identifies and highlights the latest data mining paradigms to analyze, combine, integrate, model and simulate vast amounts of heterogeneous multi-modal, multi-scale data for emerging real-world applications in life science.The cutting-edge topics presented include bio-surveillance, disease outbreak detection, high throughput bioimaging, drug screening, predictive toxicology, biosensors, and the integration of macro-scale bio-surveillance and environmental data with micro-scale biological data for personalized medicine. This collection of works from leading researchers in the field offers readers an exceptional start in these areas.

Download or read book Life Science Systems written by H. S. Chen and published by . This book was released on 2006 with total page 468 pages. Available in PDF, EPUB and Kindle. Book excerpt: This exploration book is written for the educational purpose. This book covers the introduction of life science systems, system management, system trends, system requirements, life protection, life support, space suits, airlock system, extravehicular activity, and the new life science test bed systems for the future lunar and Mars base. In this book, eleven in-depth state-of-the-art life science systems areas are covered: Chapter 1 introduces the subject of life science systems and many of the programs associated with it. Chapter 2 presents the life science systems management in the area of definition, review, and structure. Chapter 3 discusses the life science systems architecture and definition of the future lunar and Mars missions. Chapter 4 describes the life science systems and trends in the areas of atmospheric systems, water management, food production, waste processing, radiation protection, health care, and system trends. Chapter 5 describes life science systems and subsystem requirements. Chapter 6 presents the life protection design and support engineering. Chapter 7 discusses life science support systems and training. Chapter 8 describes the space suits. Chapter 9 presents the life science airlock system. Chapter 10 presents the extravehicular activity design and support engineering. Chapter 11 discusses ground life science test bed support systems and facilities for the future lunar and Mars base.