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Book A Continuous Latent Factor Model for Non ignorable Missing Data in Longitudinal Studies

Download or read book A Continuous Latent Factor Model for Non ignorable Missing Data in Longitudinal Studies written by Jun Zhang and published by . This book was released on 2013 with total page 139 pages. Available in PDF, EPUB and Kindle. Book excerpt: Many longitudinal studies, especially in clinical trials, suffer from missing data issues. Most estimation procedures assume that the missing values are ignorable or missing at random (MAR). However, this assumption leads to unrealistic simplification and is implausible for many cases. For example, an investigator is examining the effect of treatment on depression. Subjects are scheduled with doctors on a regular basis and asked questions about recent emotional situations. Patients who are experiencing severe depression are more likely to miss an appointment and leave the data missing for that particular visit. Data that are not missing at random may produce bias in results if the missing mechanism is not taken into account. In other words, the missing mechanism is related to the unobserved responses. Data are said to be non-ignorable missing if the probabilities of missingness depend on quantities that might not be included in the model. Classical pattern-mixture models for non-ignorable missing values are widely used for longitudinal data analysis because they do not require explicit specification of the missing mechanism, with the data stratified according to a variety of missing patterns and a model specified for each stratum. However, this usually results in under-identifiability, because of the need to estimate many stratum-specific parameters even though the eventual interest is usually on the marginal parameters. Pattern mixture models have the drawback that a large sample is usually required. In this thesis, two studies are presented. The first study is motivated by an open problem from pattern mixture models. Simulation studies from this part show that information in the missing data indicators can be well summarized by a simple continuous latent structure, indicating that a large number of missing data patterns may be accounted by a simple latent factor. Simulation findings that are obtained in the first study lead to a novel model, a continuous latent factor model (CLFM). The second study develops CLFM which is utilized for modeling the joint distribution of missing values and longitudinal outcomes. The proposed CLFM model is feasible even for small sample size applications. The detailed estimation theory, including estimating techniques from both frequentist and Bayesian perspectives is presented. Model performance and evaluation are studied through designed simulations and three applications. Simulation and application settings change from correctly-specified missing data mechanism to mis-specified mechanism and include different sample sizes from longitudinal studies. Among three applications, an AIDS study includes non-ignorable missing values; the Peabody Picture Vocabulary Test data have no indication on missing data mechanism and it will be applied to a sensitivity analysis; the Growth of Language and Early Literacy Skills in Preschoolers with Developmental Speech and Language Impairment study, however, has full complete data and will be used to conduct a robust analysis. The CLFM model is shown to provide more precise estimators, specifically on intercept and slope related parameters, compared with Roy's latent class model and the classic linear mixed model. This advantage will be more obvious when a small sample size is the case, where Roy's model experiences challenges on estimation convergence. The proposed CLFM model is also robust when missing data are ignorable as demonstrated through a study on Growth of Language and Early Literacy Skills in Preschoolers.

Book Latent Variable Models Given Incompletely Observed Surrogate Outcomes and Covariates

Download or read book Latent Variable Models Given Incompletely Observed Surrogate Outcomes and Covariates written by Chunfeng Ren and published by . This book was released on 2014 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Latent variable models (LVMs) are commonly used in the scenario where the outcome of the main interest is an unobservable measure, associated with multiple observed surrogate outcomes, and affected by potential risk factors. This thesis develops an approach of efficient handling missing surrogate outcomes and covariates in two- and three-level latent variable models. However, corresponding statistical methodologies and computational software are lacking efficiently analyzing the LVMs given surrogate outcomes and covariates subject to missingness in the LVMs. We analyze the two-level LVMs for longitudinal data from the National Growth of Health Study where surrogate outcomes and covariates are subject to missingness at any of the levels. A conventional method for efficient handling of missing data is to reexpress the desired model as a joint distribution of variables, including the surrogate outcomes that are subject to missingness conditional on all of the covariates that are completely observable, and estimate the joint model by maximum likelihood, which is then transformed to the desired model. The joint model, however, identifies more parameters than desired, in general. The over-identified joint model produces biased estimates of LVMs so that it is most necessary to describe how to impose constraints on the joint model so that it has a one-to-one correspondence with the desired model for unbiased estimation. The constrained joint model handles missing data efficiently under the assumption of ignorable missing data and is estimated by a modified application of the expectation-maximization (EM) algorithm.

Book Flexible Imputation of Missing Data  Second Edition

Download or read book Flexible Imputation of Missing Data Second Edition written by Stef van Buuren and published by CRC Press. This book was released on 2018-07-17 with total page 444 pages. Available in PDF, EPUB and Kindle. Book excerpt: Missing data pose challenges to real-life data analysis. Simple ad-hoc fixes, like deletion or mean imputation, only work under highly restrictive conditions, which are often not met in practice. Multiple imputation replaces each missing value by multiple plausible values. The variability between these replacements reflects our ignorance of the true (but missing) value. Each of the completed data set is then analyzed by standard methods, and the results are pooled to obtain unbiased estimates with correct confidence intervals. Multiple imputation is a general approach that also inspires novel solutions to old problems by reformulating the task at hand as a missing-data problem. This is the second edition of a popular book on multiple imputation, focused on explaining the application of methods through detailed worked examples using the MICE package as developed by the author. This new edition incorporates the recent developments in this fast-moving field. This class-tested book avoids mathematical and technical details as much as possible: formulas are accompanied by verbal statements that explain the formula in accessible terms. The book sharpens the reader’s intuition on how to think about missing data, and provides all the tools needed to execute a well-grounded quantitative analysis in the presence of missing data.

Book Longitudinal Data Analysis

Download or read book Longitudinal Data Analysis written by Garrett Fitzmaurice and published by CRC Press. This book was released on 2008-08-11 with total page 633 pages. Available in PDF, EPUB and Kindle. Book excerpt: Although many books currently available describe statistical models and methods for analyzing longitudinal data, they do not highlight connections between various research threads in the statistical literature. Responding to this void, Longitudinal Data Analysis provides a clear, comprehensive, and unified overview of state-of-the-art theory

Book Longitudinal Research with Latent Variables

Download or read book Longitudinal Research with Latent Variables written by Kees van Montfort and published by Springer Science & Business Media. This book was released on 2010-05-17 with total page 311 pages. Available in PDF, EPUB and Kindle. Book excerpt: Since Charles Spearman published his seminal paper on factor analysis in 1904 and Karl Joresk ̈ og replaced the observed variables in an econometric structural equation model by latent factors in 1970, causal modelling by means of latent variables has become the standard in the social and behavioural sciences. Indeed, the central va- ables that social and behavioural theories deal with, can hardly ever be identi?ed as observed variables. Statistical modelling has to take account of measurement - rors and invalidities in the observed variables and so address the underlying latent variables. Moreover, during the past decades it has been widely agreed on that serious causal modelling should be based on longitudinal data. It is especially in the ?eld of longitudinal research and analysis, including panel research, that progress has been made in recent years. Many comprehensive panel data sets as, for example, on human development and voting behaviour have become available for analysis. The number of publications based on longitudinal data has increased immensely. Papers with causal claims based on cross-sectional data only experience rejection just for that reason.

Book Missing Data in Longitudinal Studies

Download or read book Missing Data in Longitudinal Studies written by Michael J. Daniels and published by CRC Press. This book was released on 2008-03-11 with total page 324 pages. Available in PDF, EPUB and Kindle. Book excerpt: Drawing from the authors' own work and from the most recent developments in the field, Missing Data in Longitudinal Studies: Strategies for Bayesian Modeling and Sensitivity Analysis describes a comprehensive Bayesian approach for drawing inference from incomplete data in longitudinal studies. To illustrate these methods, the authors employ

Book Longitudinal Data Analysis

Download or read book Longitudinal Data Analysis written by Professor Catrien C J H C J H Bijleveld and published by SAGE. This book was released on 1998-10-26 with total page 462 pages. Available in PDF, EPUB and Kindle. Book excerpt: By looking at the processes of change over time - by carrying out longitudinal studies - researchers answer questions about learning, development, educational growth, social change and medical outcomes. However, longitudinal research has many faces. This book examines all the main approaches as well as newer developments (such as structural equation modelling, multilevel modelling and optimal scaling) to enable the reader to gain a thorough understanding of the approach and make appropriate decisions about which technique can be applied to the research problem. Conceptual explanations are used to keep technical terms to a minimum; examples are provided for each approach; issues of design, measurement and significance are considered; and a standard notation is used throughout.

Book Methods and Applications of Longitudinal Data Analysis

Download or read book Methods and Applications of Longitudinal Data Analysis written by Xian Liu and published by Elsevier. This book was released on 2015-09-01 with total page 531 pages. Available in PDF, EPUB and Kindle. Book excerpt: Methods and Applications of Longitudinal Data Analysis describes methods for the analysis of longitudinal data in the medical, biological and behavioral sciences. It introduces basic concepts and functions including a variety of regression models, and their practical applications across many areas of research. Statistical procedures featured within the text include: descriptive methods for delineating trends over time linear mixed regression models with both fixed and random effects covariance pattern models on correlated errors generalized estimating equations nonlinear regression models for categorical repeated measurements techniques for analyzing longitudinal data with non-ignorable missing observations Emphasis is given to applications of these methods, using substantial empirical illustrations, designed to help users of statistics better analyze and understand longitudinal data. Methods and Applications of Longitudinal Data Analysis equips both graduate students and professionals to confidently apply longitudinal data analysis to their particular discipline. It also provides a valuable reference source for applied statisticians, demographers and other quantitative methodologists. From novice to professional: this book starts with the introduction of basic models and ends with the description of some of the most advanced models in longitudinal data analysis Enables students to select the correct statistical methods to apply to their longitudinal data and avoid the pitfalls associated with incorrect selection Identifies the limitations of classical repeated measures models and describes newly developed techniques, along with real-world examples.

Book Modeling Longitudinal and Multilevel Data

Download or read book Modeling Longitudinal and Multilevel Data written by Todd D. Little and published by Psychology Press. This book was released on 2000 with total page 287 pages. Available in PDF, EPUB and Kindle. Book excerpt: Experts on handling longitudinal & multiple-group data contribute various, practical, analytic approaches including SEM,LTA,GLM, and multi-level techniques.Includes helpful tips, applications and examples. Grad students & researchers in social & behavior

Book Analyzing Longitudinal Data with Non ignorable Missing

Download or read book Analyzing Longitudinal Data with Non ignorable Missing written by and published by . This book was released on 2004 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: In longitudinal studies, data are often missing despite every attempt made to collect complete data. When the missingness is informative and hence not ignorable, it is generally difficult to analyze non-ignorable missing (NIM) data since the distributional assumptions about missing data are not easily verifiable using traditional goodness of fit tests or otherwise. Selection models and pattern-mixture models are two common approaches to analyze NIM data. Each approach has its advantages and disadvantages. Methods proposed in this thesis fall into the category of pattern-mixture models. Traditionally, patterns are determined by time to occurrence of missing. This definition often results into the problem of not all parameters being identifiable. Moreover, marginalization is commonly required and can be very tricky when outcomes are discrete. It is recognized that patterns can and need to be defined by covariates, surrogate variables andD r time to missing. We propose two approaches to model NIM data: (i) pseudo-imputation (PI) approach, in which we first obtain predictive means within each pattern, get transformed predictive means by using a suitable link function and then fit with covariates to obtain marginal estimates; (ii) joint-modeling (JM) approach, in which patterns considered as random effects are marginalized within a generalized linear mixed model framework. The JM approach is shown to be able to capture the dependence of missing indicators on missing outcomes in some degree as is the case with NIM data. Some of the main advantages of these proposed approaches include (i) the capability to handle both continuous and discrete responses, (ii) avoidance of the problem of under-identifiability, (iii) availability of marginal estimates, and (iv) computational efficiency. When the missingness does depend on the patterns, results based on simulated data suggest that both approaches yield accurate estimates if the underlying number of patterns is specified c.

Book Longitudinal Data Analysis

Download or read book Longitudinal Data Analysis written by Jason Newsom and published by Routledge. This book was released on 2013-06-19 with total page 407 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides accessible treatment to state-of-the-art approaches to analyzing longitudinal studies. Comprehensive coverage of the most popular analysis tools allows readers to pick and choose the techniques that best fit their research. The analyses are illustrated with examples from major longitudinal data sets including practical information about their content and design. Illustrations from popular software packages offer tips on how to interpret the results. Each chapter features suggested readings for additional study and a list of articles that further illustrate how to implement the analysis and report the results. Syntax examples for several software packages for each of the chapter examples are provided at www.psypress.com/longitudinal-data-analysis. Although many of the examples address health or social science questions related to aging, readers from other disciplines will find the analyses relevant to their work. In addition to demonstrating statistical analysis of longitudinal data, the book shows how to interpret and analyze the results within the context of the research design. The methods covered in this book are applicable to a range of applied problems including short- to long-term longitudinal studies using a range of sample sizes. The book provides non-technical, practical introductions to the concepts and issues relevant to longitudinal analysis. Topics include use of publicly available data sets, weighting and adjusting for complex sampling designs with longitudinal studies, missing data and attrition, measurement issues related to longitudinal research, the use of ANOVA and regression for average change over time, mediation analysis, growth curve models, basic and advanced structural equation models, and survival analysis. An ideal supplement for graduate level courses on data analysis and/or longitudinal modeling taught in psychology, gerontology, public health, human development, family studies, medicine, sociology, social work, and other behavioral, social, and health sciences, this multidisciplinary book will also appeal to researchers in these fields.

Book Multiple Imputation of Missing Data Using SAS

Download or read book Multiple Imputation of Missing Data Using SAS written by Patricia Berglund and published by SAS Institute. This book was released on 2014-07-01 with total page 164 pages. Available in PDF, EPUB and Kindle. Book excerpt: Find guidance on using SAS for multiple imputation and solving common missing data issues. Multiple Imputation of Missing Data Using SAS provides both theoretical background and constructive solutions for those working with incomplete data sets in an engaging example-driven format. It offers practical instruction on the use of SAS for multiple imputation and provides numerous examples that use a variety of public release data sets with applications to survey data. Written for users with an intermediate background in SAS programming and statistics, this book is an excellent resource for anyone seeking guidance on multiple imputation. The authors cover the MI and MIANALYZE procedures in detail, along with other procedures used for analysis of complete data sets. They guide analysts through the multiple imputation process, including evaluation of missing data patterns, choice of an imputation method, execution of the process, and interpretation of results. Topics discussed include how to deal with missing data problems in a statistically appropriate manner, how to intelligently select an imputation method, how to incorporate the uncertainty introduced by the imputation process, and how to incorporate the complex sample design (if appropriate) through use of the SAS SURVEY procedures. Discover the theoretical background and see extensive applications of the multiple imputation process in action. This book is part of the SAS Press program.

Book Bayesian Nonparametric Analysis of Longitudinal Data with Non ignorable Non monotone Missingness

Download or read book Bayesian Nonparametric Analysis of Longitudinal Data with Non ignorable Non monotone Missingness written by Yu Cao and published by . This book was released on 2019 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: In longitudinal studies, outcomes are measured repeatedly over time, but in reality clinical studies are full of missing data points of monotone and non-monotone nature. Often this missingness is related to the unobserved data so that it is non-ignorable. In such context, pattern-mixture model (PMM) is one popular tool to analyze the joint distribution of outcome and missingness patterns. Then the unobserved outcomes are imputed using the distribution of observed outcomes, conditioned on missing patterns. However, the existing methods suffer from model identification issues if data is sparse in specific missing patterns, which is very likely to happen with a small sample size or a large number of repetitions. We extend the existing methods using latent class analysis (LCA) and a shared-parameter PMM. The LCA groups patterns of missingness with similar features and the shared-parameter PMM allows a subset of parameters to be different among latent classes when fitting a model, thus restoring model identifiability. A novel imputation method is also developed using the distribution of observed data conditioned on latent classes. We develop this model for continuous response data and extend it to handle ordinal rating scale data. Our model performs better than existing methods for data with small sample size. The method is applied to two datasets from a phase II clinical trial that studies the quality of life for patients with prostate cancer receiving radiation therapy, and another to study the relationship between the perceived neighborhood condition in adolescence and the drinking habit in adulthood.

Book Mixed Effects Models for Complex Data

Download or read book Mixed Effects Models for Complex Data written by Lang Wu and published by CRC Press. This book was released on 2009-11-11 with total page 431 pages. Available in PDF, EPUB and Kindle. Book excerpt: Although standard mixed effects models are useful in a range of studies, other approaches must often be used in correlation with them when studying complex or incomplete data. Mixed Effects Models for Complex Data discusses commonly used mixed effects models and presents appropriate approaches to address dropouts, missing data, measurement errors, censoring, and outliers. For each class of mixed effects model, the author reviews the corresponding class of regression model for cross-sectional data. An overview of general models and methods, along with motivating examples After presenting real data examples and outlining general approaches to the analysis of longitudinal/clustered data and incomplete data, the book introduces linear mixed effects (LME) models, generalized linear mixed models (GLMMs), nonlinear mixed effects (NLME) models, and semiparametric and nonparametric mixed effects models. It also includes general approaches for the analysis of complex data with missing values, measurement errors, censoring, and outliers. Self-contained coverage of specific topics Subsequent chapters delve more deeply into missing data problems, covariate measurement errors, and censored responses in mixed effects models. Focusing on incomplete data, the book also covers survival and frailty models, joint models of survival and longitudinal data, robust methods for mixed effects models, marginal generalized estimating equation (GEE) models for longitudinal or clustered data, and Bayesian methods for mixed effects models. Background material In the appendix, the author provides background information, such as likelihood theory, the Gibbs sampler, rejection and importance sampling methods, numerical integration methods, optimization methods, bootstrap, and matrix algebra. Failure to properly address missing data, measurement errors, and other issues in statistical analyses can lead to severely biased or misleading results. This book explores the biases that arise when naïve methods are used and shows which approaches should be used to achieve accurate results in longitudinal data analysis.