Download or read book Insights Into the Physiology and Ecology of the Brackish water adapted Cyanobacterium Nodularia Spumigena CCY9414 Based on a Genome transcriptome Analysis written by Björn Voß and published by . This book was released on 2013 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Abstract: Nodularia spumigena is a filamentous diazotrophic cyanobacterium that dominates the annual late summer cyanobacterial blooms in the Baltic Sea. But N. spumigena also is common in brackish water bodies worldwide, suggesting special adaptation allowing it to thrive at moderate salinities. A draft genome analysis of N. spumigena sp. CCY9414 yielded a single scaffold of 5,462,271 nucleotides in length on which genes for 5,294 proteins were annotated. A subsequent strand-specific transcriptome analysis identified more than 6,000 putative transcriptional start sites (TSS). Orphan TSSs located in intergenic regions led us to predict 764 non-coding RNAs, among them 70 copies of a possible retrotransposon and several potential RNA regulators, some of which are also present in other N2-fixing cyanobacteria. Approximately 4% of the total coding capacity is devoted to the production of secondary metabolites, among them the potent hepatotoxin nodularin, the linear spumigin and the cyclic nodulapeptin. The transcriptional complexity associated with genes involved in nitrogen fixation and heterocyst differentiation is considerably smaller compared to other Nostocales. In contrast, sophisticated systems exist for the uptake and assimilation of iron and phosphorus compounds, for the synthesis of compatible solutes, and for the formation of gas vesicles, required for the active control of buoyancy. Hence, the annotation and interpretation of this sequence provides a vast array of clues into the genomic underpinnings of the physiology of this cyanobacterium and indicates in particular a competitive edge of N. spumigena in nutrient-limited brackish water ecosystems
Download or read book Cyanobacteria written by Arun Kumar Mishra and published by Elsevier. This book was released on 2023-11-24 with total page 645 pages. Available in PDF, EPUB and Kindle. Book excerpt: Cyanobacteria, the ancient photoautotrophs on the Earth have always been regarded as the most important organism to sustain life in the planet. They are among the first pioneering communities on various harsh habitat, hydrarch or xerarch, which finally facilitate the emergence of vast communities including higher plants. Being the progenitor of chloroplast, the cyanobacterial metabolisms has always fascinated microbiologist. Additionally, the ability of these prokaryotes to produce valuable and prolific sources of natural products signified their role in array of industrial sectors. Further, the attempts to engineer the cyanobacterial metabolisms in way to enhance production of these metabolites are gradually increasing. Therefore, in this book, we proposed to accumulate the knowledge of cyanobacterial metabolisms and molecules as an asset for students, researchers, and biotechnologists. Cyanobacteria: Metabolisms to Molecules will cover diversity, fundamental metabolisms, crucial metabolities and their synthesis, and bioinformatics. - Casts light on cyanobacterial assistance and their potential role in sustainable developments - Provides significant insights into the fundamentals of cyanobacterial metabolism as well as lesser known topics - Determines the role of cyanobacteria in public health
Download or read book Advances in Microbial Physiology written by and published by Academic Press. This book was released on 2015-07-17 with total page 531 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume of Advances in Microbial Physiology continues the long tradition of topical and important reviews in microbiology - Contributions from leading authorities - Informs and updates on all the latest developments in the field
Download or read book The Marine Microbiome written by Lucas J. Stal and published by Springer Nature. This book was released on 2022-02-28 with total page 768 pages. Available in PDF, EPUB and Kindle. Book excerpt: This updated and expanded second edition reviews numerous aspects of the marine microbiome and its possible industrial applications. The marine microbiome is the total of microorganisms and viruses in the ocean and seas and in any connected environment, including the seafloor and marine animals and plants. In the first part of the book, diversity, origin and evolution of the marine microorganisms and viruses are discussed. The microbes presented originate from all three domains of life: Bacteria, Archaea, and Eukarya. The second part sheds some light on the different communities: it describes marine habitats and how their inhabitants control biogeochemical cycles. The third part finally examines the microbial ocean as a global system and evaluates methods of utilizing marine microbial resources. Adopting a translational approach, the book connects academic research with industrial applications, making it a fascinating read and valuable resource for microbiologists from both domains.
Download or read book Cyanobacteria The Green E coli written by Anne M Ruffing and published by Frontiers Media SA. This book was released on 2016-03-16 with total page 116 pages. Available in PDF, EPUB and Kindle. Book excerpt: As the world struggles to reduce its dependence on fossil fuels and curb greenhouse gas emissions, industrial biotechnology is also ‘going green.’ Escherichia coli has long been used as a model Gram-negative bacterium, not only for fundamental research, but also for industrial applications. Recently, however, cyanobacteria have emerged as candidate chassis for the production of commodity fuels and chemicals, utilizing CO2 and sunlight as the main nutrient requirements. In addition to their potential for reducing greenhouse gas emissions and lowering production costs, cyanobacteria have naturally efficient pathways for the production metabolites such as carotenoids, which are of importance in the nutraceutical industry. The unique metabolic and regulatory pathways present in cyanobacteria present new challenges for metabolic engineers and synthetic biologists. Moreover, their requirement for light and the dynamic regulatory mechanisms of the diurnal cycle further complicate the development and application of cyanobacteria for industrial applications. Consequently, significant advancements in cyanobacterial engineering and strain development are necessary for the development of a ‘green E. coli’. This Research Topic will focus on cyanobacteria as organisms of emerging industrial relevance, including research focused on the development of genetic tools for cyanobacteria, the investigation of new cyanobacterial strains, the construction of novel cyanobacterial strains via genetic engineering, the application of ‘omics’ tools to advance the understanding of engineered cyanobacteria, and the development of computational models for cyanobacterial strain development.
Download or read book Regulating with RNA in Bacteria and Archaea written by Gisela Storz and published by John Wiley & Sons. This book was released on 2020-07-10 with total page 400 pages. Available in PDF, EPUB and Kindle. Book excerpt: Revealing the many roles of RNA in regulating gene expression For decades after the discoveries of messenger RNA, transfer RNA, and ribosomal RNA, it was largely assumed that the role of RNA in the cell was limited to shuttling the genomic message, chaperoning amino acids, and toiling in the ribosomes. Eventually, hints that RNA molecules might have regulatory roles began to appear. With the advent of genomics and bioinformatics, it became evident that numerous other RNA forms exist and have specific functions, including small RNAs (sRNA), RNA thermometers, and riboswitches to regulate core metabolic pathways, bacterial pathogenesis, iron homeostasis, quorum sensing, and biofilm formation. All of these functions, and more, are presented in Regulating with RNA in Bacteria and Archaea, written by RNA biologists from around the globe. Divided into eight sections-RNases and Helicases, Cis-Acting RNAs, Cis Encoded Base Pairing RNAs, Trans-Encoded Base Pairing RNAs, Protein Titration and Scaffolding, General Considerations, Emerging Topics, and Resources-this book serves as an excellent resource for established RNA biologists and for the many scientists who are studying regulated cellular systems. It is no longer a fair assumption that gene expression regulation is the provenance of proteins only or that control is exerted primarily at the level of transcription. This book makes clear that regulatory RNAs are key partners along with proteins in controlling the complex interactions and pathways found within prokaryotes.
Download or read book Photosynthesis Productivity and Environmental Stress written by Parvaiz Ahmad and published by John Wiley & Sons. This book was released on 2019-11-04 with total page 365 pages. Available in PDF, EPUB and Kindle. Book excerpt: A guide to environmental fluctuations that examines photosynthesis under both controlled and stressed conditions Photosynthesis, Productivity and Environmental Stress is a much-needed guide that explores the topics related to photosynthesis (both terrestrial and aquatic) and puts the focus on the basic effect of environmental fluctuations. The authors—noted experts on the topic—discuss photosynthesis under both controlled and stressed conditions and review new techniques for mitigating stressors including methods such as transgeneics, proteomics, genomics, ionomics, metabolomics, micromics, and more. In order to feed our burgeoning world population, it is vital that we must increase food production. Photosynthesis is directly related to plant growth and crop production and any fluctuation in the photosynthetic activity imposes great threat to crop productivity. Due to the environmental fluctuations plants are often exposed to the different environmental stresses that cause decreased photosynthetic rate and problems in the plant growth and development. This important book addresses this topic and: Covers topics related to terrestrial and aquatic photosynthesis Highlights the basic effect of environmental fluctuations Explores common stressors such as drought, salinity, alkalinity, temperature, UV-radiations, oxygen deficiency, and more Contains methods and techniques for improving photosynthetic efficiency for greater crop yield Written for biologists and environmentalists, Photosynthesis, Productivity and Environmental Stress offers an overview of the stressors affecting photosynthesis and includes possible solutions for improved crop production.
Download or read book Microbial Ecology of the Oceans written by Josep M. Gasol and published by John Wiley & Sons. This book was released on 2018-01-31 with total page 567 pages. Available in PDF, EPUB and Kindle. Book excerpt: The newly revised and updated third edition of the bestselling book on microbial ecology in the oceans The third edition of Microbial Ecology of the Oceans features new topics, as well as different approaches to subjects dealt with in previous editions. The book starts out with a general introduction to the changes in the field, as well as looking at the prospects for the coming years. Chapters cover ecology, diversity, and function of microbes, and of microbial genes in the ocean. The biology and ecology of some model organisms, and how we can model the whole of the marine microbes, are dealt with, and some of the trophic roles that have changed in the last years are discussed. Finally, the role of microbes in the oceanic P cycle are presented. Microbial Ecology of the Oceans, Third Edition offers chapters on The Evolution of Microbial Ecology of the Ocean; Marine Microbial Diversity as Seen by High Throughput Sequencing; Ecological Significance of Microbial Trophic Mixing in the Oligotrophic Ocean; Metatranscritomics and Metaproteomics; Advances in Microbial Ecology from Model Marine Bacteria; Marine Microbes and Nonliving Organic Matter; Microbial Ecology and Biogeochemistry of Oxygen-Deficient Water Columns; The Ocean’s Microscale; Ecological Genomics of Marine Viruses; Microbial Physiological Ecology of The Marine Phosphorus Cycle; Phytoplankton Functional Types; and more. A new and updated edition of a key book in aquatic microbial ecology Includes widely used methodological approaches Fully describes the structure of the microbial ecosystem, discussing in particular the sources of carbon for microbial growth Offers theoretical interpretations of subtropical plankton biogeography Microbial Ecology of the Oceans is an ideal text for advanced undergraduates, beginning graduate students, and colleagues from other fields wishing to learn about microbes and the processes they mediate in marine systems.
Download or read book Stress Biology of Cyanobacteria written by Ashish Kumar Srivastava and published by CRC Press. This book was released on 2013-03-01 with total page 397 pages. Available in PDF, EPUB and Kindle. Book excerpt: A significant component of many different ecosystems, cyanobacteria occupy almost every niche of the earth, including fresh and salt waters, rice fields, hot springs, arid deserts, and polar regions. Cyanobacteria, along with algae, produce nearly half the global oxygen, making assessment of their ecophysiologies important for understanding climate impacts and potential remediation. Stress Biology of Cyanobacteria: Molecular Mechanisms to Cellular Responses is a compilation of holistic responses of cyanobacteria, ranging from ecological and physiological to the modern aspects of their molecular biology, genomics, and biochemistry. Covering almost every aspect of cyanobacterial stress biology, this book is divided into two parts: Bioenergetics and Molecular Mechanisms of Stress Tolerance and Cellular Responses and Ecophysiology. The first few chapters focus on the molecular bioenergetics of photosynthesis and respiration in cyanobacteria, and provide a clear perspective on different stress tolerance mechanisms. Part I also covers the effect of specific stresses—including heavy metal, high and low temperature, salt, osmotic, and UV-B stress—on a wide range of vital physiological, biochemical, and molecular processes of cyanobacteria. Part II describes mechanisms of symbiosis, stress-induced bioproducts, and the role of environmental factors on nitrogen fixation, which along with photosynthesis is a major contributor to the current geochemical status of the planet. The text also covers mutation and cyanobacterial adaptation, and the most widely studied cyanotoxin, microcystin, which has effects on both human and animal health. With contributions from experts around the world, representing the global importance of cyanobacteria, this book provides a broad compilation of research that deals with cyanobacterial stress responses in both controlled laboratory conditions as well as in their natural environment.
Download or read book Ecophysiology and Biochemistry of Cyanobacteria written by Rajesh Prasad Rastogi and published by . This book was released on 2021 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book emphasizes and presents the latest information on eco-physiology and biochemistry of cyanobacteria with special emphasis on their biodiversity, molecular mechanisms of some important biological processes and survival mechanisms under myriad of environmental conditions as well as bioremediation. Cyanobacteria are the most dominant prokaryotic floras on the Earth's surface, and are of great importance in terms of ecological, economical and evolutionary perspectives. They are oldest groups of photosynthetic autotrophs, which create oxygenic atmosphere for the development and sustainability of ecosystems with different life forms. The book presents an integrative approach to their possible biotechnological application in the field of bio-energy and various aspects of biochemistry, biophysics and structural biology of photosynthesis. The various chapters describe the different applications of cyanobacteria as bio-energy sources and in phycoremediation. The contents incorporated in this book can be used as a textbook by undergraduate and post-graduate students, teachers, and researchers in the most interesting fields of physicochemical ecology and biochemistry of cyanobacteria.
Download or read book The Marine Microbiome written by Lucas J. Stal and published by Springer. This book was released on 2016-06-03 with total page 501 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes the state-of-the-art concerning the ‘marine microbiome’ and its uses in biotechnology. The first part discusses the diversity and ecology of marine microorganisms and viruses, including all three domains of life: Bacteria, Archaea, and Eukarya. It discusses whether marine microorganisms exist and, if so, why they might be unique. The second part presents selected marine habitats, their inhabitants and how they influence biogeochemical cycles, while the third discusses the utilization of marine microbial resources, including legal aspects, dissemination, and public awareness. The marine microbiome is the total of microorganisms and viruses in the ocean and seas and in any connected environment, including the seafloor and marine animals and plants. The diversity of microbial life remains unquantified and largely unknown, and could represent a hidden treasure for human society. Accordingly, this book is also intended to connect academics and industry, providing essential information for microbiologists from both fields.
Download or read book Cyanobacteria written by Aloysio Da S. Ferrão-Filho and published by Nova Science Publishers. This book was released on 2013 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Cyanobacteria are procariotic organisms (like bacteria) that are long living on Earth (about 3.5 billion years). These tiny creatures have adapted to several kinds of habitats and climates showing a huge adaptive irradiance. Their huge plasticity makes them a successful organism, able to colonise different habitats and climates. They can be found both in terrestrial and aquatic ecosystems, from poles to deserts and from lakes to the seas over the world. Another remarkable characteristic of cayanobacteria is their capacity to produce several bioactive compounds, such as toxins and allelochemicals, which makes them even stronger competitors. Cyanobacterial blooms have been considered a serious problem in lakes and reservoirs world-wide, threatening wild life, cattle and humans as well. This book covers a series of up-to-date topics in cyabobacterial research, such as the role of cyanotoxins in species interactions, toxicology and ecotoxicology, risk assessment and management of toxic cyanobacteria and cyanotoxins.
Download or read book The Physiology of Microalgae written by Michael A. Borowitzka and published by Springer. This book was released on 2016-03-21 with total page 673 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book covers the state-of-the-art of microalgae physiology and biochemistry (and the several –omics). It serves as a key reference work for those working with microalgae, whether in the lab, the field, or for commercial applications. It is aimed at new entrants into the field (i.e. PhD students) as well as experienced practitioners. It has been over 40 years since the publication of a book on algal physiology. Apart from reviews and chapters no other comprehensive book on this topic has been published. Research on microalgae has expanded enormously since then, as has the commercial exploitation of microalgae. This volume thoroughly deals with the most critical physiological and biochemical processes governing algal growth and production.
Download or read book Biological Soil Crusts An Organizing Principle in Drylands written by Bettina Weber and published by Springer. This book was released on 2016-05-21 with total page 540 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume summarizes our current understanding of biological soil crusts (biocrusts), which are omnipresent in dryland regions. Since they cover the soil surface, they influence, or even control, all surface exchange processes. Being one of the oldest terrestrial communities, biocrusts comprise a high diversity of cyanobacteria, algae, lichens and bryophytes together with uncounted bacteria, and fungi. The authors show that biocrusts are an integral part of dryland ecosystems, stabilizing soils, influencing plant germination and growth, and playing a key role in carbon, nitrogen and water cycling. Initial attempts have been made to use biocrusts as models in ecological theory. On the other hand, biocrusts are endangered by local disruptions and global change, highlighting the need for enhanced recovery methods. This book offers a comprehensive overview of the fascinating field of biocrust research, making it indispensable not only for scientists in this area, but also for land managers, policy makers, and anyone interested in the environment.
Download or read book Mobile DNA III written by Michael Chandler and published by John Wiley & Sons. This book was released on 2020-07-24 with total page 1321 pages. Available in PDF, EPUB and Kindle. Book excerpt: An exploration of the raw power of genetic material to refashion itself to any purpose... Virtually all organisms contain multiple mobile DNAs that can move from place to place, and in some organisms, mobile DNA elements make up a significant portion of the genome. Mobile DNA III provides a comprehensive review of recent research, including findings suggesting the important role that mobile elements play in genome evolution and stability. Editor-in-Chief Nancy L. Craig assembled a team of multidisciplinary experts to develop this cutting-edge resource that covers the specific molecular mechanisms involved in recombination, including a detailed structural analysis of the enzymes responsible presents a detailed account of the many different recombination systems that can rearrange genomes examines the tremendous impact of mobile DNA in virtually all organisms Mobile DNA III is valuable as an in-depth supplemental reading for upper level life sciences students and as a reference for investigators exploring new biological systems. Biomedical researchers will find documentation of recent advances in understanding immune-antigen conflict between host and pathogen. It introduces biotechnicians to amazing tools for in vivo control of designer DNAs. It allows specialists to pick and choose advanced reviews of specific elements and to be drawn in by unexpected parallels and contrasts among the elements in diverse organisms. Mobile DNA III provides the most lucid reviews of these complex topics available anywhere.
Download or read book Biological Oceanography of the Baltic Sea written by Pauline Snoeijs-Leijonmalm and published by Springer Science & Business Media. This book was released on 2017-04-04 with total page 696 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the first comprehensive science-based textbook on the biology and ecology of the Baltic Sea, one of the world’s largest brackish water bodies. The aim of this book is to provide students and other readers with knowledge about the conditions for life in brackish water, the functioning of the Baltic Sea ecosystem and its environmental problems and management. It highlights biological variation along the unique environmental gradients of the brackish Baltic Sea Area (the Baltic Sea, Belt Sea and Kattegat), especially those in salinity and climate. pt;font-family:"Arial","sans-serif"; color:#262626">The first part of the book presents the challenges for life processes and ecosystem dynamics that result from the Baltic Sea’s highly variable recent geological history and geographical isolation. The second part explains interactions between organisms and their environment, including biogeochemical cycles, patterns of biodiversity, genetic diversity and evolution, biological invasions and physiological adaptations. In the third part, the subsystems of the Baltic Sea ecosystem – the pelagic zone, the sea ice, the deep soft sea beds, the phytobenthic zone, the sandy coasts, and estuaries and coastal lagoons – are treated in detail with respect to the structure and function of communities and habitats and consequences of natural and anthropogenic constraints, such as climate change, discharges of nutrients and hazardous substances. Finally, the fourth part of the book discusses monitoring and ecosystem-based management to deal with contemporary and emerging threats to the ecosystem’s health.
Download or read book Bioenergetic Processes of Cyanobacteria written by Guenter A. Peschek and published by Springer Science & Business Media. This book was released on 2011-05-26 with total page 733 pages. Available in PDF, EPUB and Kindle. Book excerpt: This publication is unique among a number of books on cyanobacteria because it focuses on the bioenergetics of these widespread organisms which are the evolutionary prerequisite for the development of all higher forms of life on our "blue" planet. The book primarily addresses questions of energy conversion by the fundamental bioenergetic processes: (oxygenic) photosynthesis, (aerobic) respiration, and (anaerobic) fermentation which uniquely occur together in these prokaryotic cells. Thermophilic cyanobacteria offer the most suitable material for high resolution structure analyses of Photosystem I and II and other electron transport complexes by X-ray crystallography (for example, at present the structure of Photosystem II at atomic resolution is only known for these organisms). These achievements during the last decade represent a milestone in our understanding of the complexes which are crucial for solar energy exploitation through photosynthetic water splitting. The present work represents an ambitious attempt to achieve the goal of a synoptic state-of-the-art picture by casting together the mosaics of detailed knowledge described by leading experts in the field. It contains 24 chapters written by 35 authors from Europe, USA, India and Japan. The book is aimed at reaching a broad audience ranging from students to experienced scientists. The editors wish all readers a pleasant and stimulating journey through the fascinating “world” of the bioenergetics of cyanobacteria and sincerely hope that this book will not only be of great value for the experts but also entice young people into this exciting research area with the aim to address successfully the challenging problems of high relevance that are still waiting for a satisfactory answer.
