Download or read book Influence of Geological Variation on Dissolved Organic Matter Quality and Microbial Community Structure in Forested Stream Sediments written by Jennifer June Mosher and published by . This book was released on 2008 with total page 216 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Spatio temporal Variation and Dissolved Organic Carbon Processing of Streambed Microbial Community written by Philips Olugbemiga Akinwole and published by . This book was released on 2013 with total page 168 pages. Available in PDF, EPUB and Kindle. Book excerpt: Sedimentary microbial communities play a critical ecological role in lotic ecosystems and are responsible for numerous biogeochemical transformations, including dissolved organic matter (DOM) uptake, degradation, and mineralization. The goals of this study were to elucidate the benthic microbes responsible for utilization of humic DOM in streams and to assess overall variability in microbial biomass and community structure over time and across multiple spatial scales in stream networks, as DOM quality and quantity will likely change with stream order. In Chapter 2, multiple spatial patterns of microbial biomass and community structure were examined in stream sediments from two watersheds; the Neversink River watershed (NY; 1st, 3rd and 5th order streams sampled) and the White Clay Creek watershed (PA; 1st through 3rd order streams sampled). Microbial biomass and community structure were estimated by phospholipid phosphate and phospholipid fatty acids (PLFA) analyses. Multivariate analysis showed that sedimentary C:N ratios, percent carbon, sediment surface area and percent water content explained 68% of the variations in total microbial biomass. Overall, the magnitude of within stream variation in microbial biomass was small compared to the variability noted among streams and between watersheds. Principal component analysis (PCA) of PLFA profiles showed that microbial community structure displayed a distinct watershed-level biogeography, as well as variation along a stream order gradient. Chapter 3 demonstrated that benthic microbial biomass was seasonally dynamic and significantly correlated to a combination of high and low flood pulse counts, variability in daily flow and DOC concentration in the White Clay Creek. Additionally, the seasonal pattern of variation observed in microbial community structure was as a result of shift between the ratios of prokaryotic to eukaryotic component of the community. This shift was significantly correlated with seasonal changes in median daily flow, high and low flood pulse counts, DOC concentrations and water temperature. Compound-specific 13C analysis of PLFA showed that both bacterial and microeukaryotic stable carbon isotope ratios were heaviest in the spring and lightest in autumn or winter. Bacterial lipids were isotopically depleted on average by 2 - 5 / relative to δ13C of total organic carbon suggesting bacterial consumption of allochthonous organic matter, and enriched relative to δ13C algae-derived carbon source. In Chapter 4, heterotrophic microbes that metabolize humic DOM in a third-order stream were identified through trace-additions of 13C-labeled tree tissue leachate (13C-DOC) into stream sediment mesocosms. Microbial community structure was assessed using PLFA biomarkers, and metabolically active members were identified through 13C-PLFA analysis (PLFA-SIP). Comparison by PCA of the microbial communities in stream sediments and stream sediments incubated in both the presence and absence of 13C-DOC showed our mesocosm-based experimental design as sufficiently robust to investigate the utilization of 13C-DOC by sediment microbial communities. After 48 hours of incubation, PLFA-SIP identified heterotrophic α, β, and γ- proteobacteria and facultative anaerobic bacteria as the organisms primarily responsible for humic DOC consumption in streams and heterotrophic microeucaryotes as their predators. The evidence presented in this study shows a complex relationship between microbial community structure, environmental heterogeneity and utilization of humic DOC, indicating that humic DOC quality and quantity along with other hydro-ecological variables should be considered among the important factors that structure benthic microbial communities in lotic ecosystems.
Download or read book Hydrologic Dynamics Control Dissolved Organic Matter Export from Watersheds written by Rebecca Anne Bellmore and published by . This book was released on 2014 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Dissolved organic matter (DOM) is an important component of nutrient cycling and energy transfer within and between ecosystems. Understanding controls over the magnitude and quality of DOM that is transferred from soils to surface water is needed to better characterize the terrestrial-aquatic carbon flux and effects of terrestrial DOM on downstream ecosystems. A meta-analysis of the response of in-stream dissolved organic nitrogen concentration (DON) to high flow events indicates that DON typically increases with flow across a wide range of ecosystem types, likely as novel DOM sources in the landscape are mobilized and transported to streams and rivers. Mechanisms controlling DOM export, including dissolved organic carbon (DOC) and DON concentrations and the quality of DOM, were examined in a small agricultural catchment in eastern Washington State. In the soil column, DOC concentration declined and source of DOM shifted from humic-like and plant-derived to microbially-derived with depth through the profile. Across seasons and years, DOM exported via drain discharge during low flows resembled that found deep in the soil profile, and DOM exported during high flows suggests topsoil and litter sources contribute to export. A simple mixing model suggests that litter leachate can contribute over 50% of DOM during peak flow. Based on modeled contributions of litter, topsoil and subsoil DOM during storm events, DOC concentration is over-predicted, except for peak flows, suggesting removal via sorption and/or microbial decomposition in the soil column control DOC export on the timescale of events. Although the character of exported DOM shifts with flow conditions, laboratory incubations suggest bioavailability to the stream sediment microbial community is consistently low, with a maximum of 7% loss over 6 days, indicating exported DOM is likely transported beyond the immediate stream reach. An analysis of anticipated effects of climate change on the flow regime in the catchment projects the wettest years to become more variable, with non-linear effects on the magnitude of DOC export. Finally I explore how climate change assessments can be incorporated into nonpoint source nutrient management plans, despite current uncertainty about the magnitude and timeframe of climate effects on nutrient loading.
Download or read book Methods in Stream Ecology written by F. Richard Hauer and published by Academic Press. This book was released on 2017-01-16 with total page 508 pages. Available in PDF, EPUB and Kindle. Book excerpt: Methods in Stream Ecology provides a complete series of field and laboratory protocols in stream ecology that are ideal for teaching or conducting research. This two part new edition is updated to reflect recent advances in the technology associated with ecological assessment of streams, including remote sensing. Volume focusses on ecosystem structure with in-depth sections on Physical Processes, Material Storage and Transport and Stream Biota. With a student-friendly price, this Third Edition is key for all students and researchers in stream and freshwater ecology, freshwater biology, marine ecology, and river ecology. This text is also supportive as a supplementary text for courses in watershed ecology/science, hydrology, fluvial geomorphology, and landscape ecology. Methods in Stream Ecology, 3rd Edition, Volume 2: Ecosystem Structure, is also available now! Provides a variety of exercises in each chapter Includes detailed instructions, illustrations, formulae, and data sheets for in-field research for students Presents taxonomic keys to common stream invertebrates and algae Includes website with tables and a link from Chapter 22: FISH COMMUNITY COMPOSITION to an interactive program for assessing and modeling fish numbers Written by leading experts in stream ecology
Download or read book The Effects of Dissolved Organic Matter Quality and Invertebrate Grazing on Microbial Films in Cave Streams written by and published by . This book was released on 2007 with total page 68 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Linking Optical and Chemical Properties of Dissolved Organic Matter in Natural Waters written by Christopher L. Osburn and published by Frontiers Media SA. This book was released on 2017-01-17 with total page 244 pages. Available in PDF, EPUB and Kindle. Book excerpt: A substantial increase in the number of studies using the optical properties (absorbance and fluorescence) of dissolved organic matter (DOM) as a proxy for its chemical properties in estuaries and the coastal and open ocean has occurred during the last decade. We are making progress on finding the actual chemical compounds or phenomena responsible for DOM’s optical properties. Ultrahigh resolution mass spectrometry, in particular, has made important progress in making the key connections between optics and chemistry. But serious questions remain and the last major special issue on DOM optics and chemistry occurred nearly 10 years ago. Controversies remain from the non-specific optical properties of DOM that are not linked to discrete sources, and sometimes provide conflicting information. The use of optics, which is relatively easier to employ in synoptic and high resolution sampling to determine chemistry, is a critical connection to make and can lead to major advances in our understanding of organic matter cycling in all aquatic ecosystems. The contentions and controversies raised by our poor understanding of the linkages between optics and chemistry of DOM are bottlenecks that need to be addressed and overcome.
Download or read book Examining Anaerobic Microbial Communities that Direct the Fate of Terrestrial Carbon in Lake Sediments written by Kurt Yakimovich and published by . This book was released on 2017 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Freshwater lake sediments play key roles in the cycling of carbon. This includes hosting microbial communities responsible for mineralizing large amounts of carbon into greenhouse gases-namely CO2 and CH4. Yet despite the important roles of sediment communities, their ecology and community structure linkages to biogeochemical cycling are not well known, and little data exists exploring how sediment microbial communities respond to different organic matter inputs. Here I start by reviewing previous literature on lake sediment microbial communities and the physicochemical factors affecting their composition and diversity. Next I report on data from two experiments, first an in-vitro lab study and then an in-situ field study, in which lake sediments were amended with different plant litters that could result from land use change and or succession in catchments. Microbial communities were examined with next generation amplicon sequencing. These data were linked to rates of CO2 and CH4 flux and dissolved organic matter (DOM) components present in pore water were examined as potential controls on community structure and function. I observed in-vitro that methanogen community composition and activity were affected by OM type, with macrophyte derived C enhancing microbial activity, whereas high concentrations of polyphenolic compounds from terrestrial tree litters inhibited methanogen activity. The polyphenols had an environmental filtering effect, selecting for different bacteria, fungi and methanogen communities. The in-situ experiments involved installing mesocosms with artificial sediments with variable amounts of deciduous and coniferous tree leaf litter. In these mesocosms we observed a link between methanogen community composition and decomposition rates, as measured with bulk CO2 and CH4 production and DOM humification. Decomposition rates were influenced by lake physicochemical factors, particularly the degree of photoexposure. With increased decomposition, specialist taxa of methanogens could thrive that conferred higher rates of methanogenesis. The work presented here demonstrates the adaptability of methanogen lake sediment communities as terminal decomposers under changing terrestrial OM subsidies.
Download or read book Watershed Hydrology written by Vijay P. Singh and published by Allied Publishers. This book was released on 2003 with total page 588 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Riparian Landscapes written by George Patrick Malanson and published by Cambridge University Press. This book was released on 1993-05-27 with total page 308 pages. Available in PDF, EPUB and Kindle. Book excerpt: Riparian Landscapes examines the ecological systems of streamside and floodplain areas from the perspective of landscape ecology. The specific spatial pattern of riparian vegetation is seen as a result of, and a control on, the ecological, geomorphological, and hydrological processes that operate along rivers. Riparian structures are controlled by the spatial dynamics of channels, flooding and soil moisture. These dynamics are part of integrated cascades of water, sediment, nutrients and carbon, to which animal and plant species respond in ways that illuminate community structure and competition. The role of the riparian zone in controlling species distribution and abundance is discussed. Intelligent management of these valuable ecological resources is highlighted. The potential for linking hydrological, geomorphological and ecological simulation models is also explored. This book will be of interest to graduate and professional research workers in environmental science, ecology and physical geography.
Download or read book Effects of Inter tributary Dissolved Organic Carbon Variability on Heterotrophic Microbial Communities in Upper Winyah Bay SC written by Emma K. Wear and published by . This book was released on 2009 with total page 340 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book The Effect of In line Lakes on Dissolved Organic Matter Dynamics in Mountain Streams written by Keli J. Goodman and published by . This book was released on 2010 with total page 183 pages. Available in PDF, EPUB and Kindle. Book excerpt: This research combines observation, experimentation, and modeling to evaluate the influence of lakes on dissolved organic matter (DOM) quantity, quality and export in subalpine watersheds of the Sawtooth Mountain Lake District, central Idaho. First, I conducted an empirical study of the hydrologic and biogeochemical controls on DOM dynamics in stream-lake fluvial networks. I hypothesized that lakes would decrease temporal variability (i.e., buffer) and alter the characteristics of DOM from inflow to outflow. I tested these hypotheses by evaluating DOM temporal patterns and measuring annual export in seven-paired lake inflows and outflows. I then evaluated how ultraviolet (UV) exposure affected DOM characteristics during snowmelt and baseflow, and how UV alters baseflow DOM bioavailability and nutrient limitation. Given that increased water residence time increases UV exposure, I hypothesized that lake outflow DOM would be more photorecalcitrant than DOM from lake inflows. I further hypothesized that UV exposure would increase DOM quality, heterotrophic processing, and nutrient demand. Results indicate that lakes can buffer stream temporal variability by acting as a DOM sink during snowmelt and a DOM source during baseflow. Lake outflow DOM photodegradation was similar to lake inflows during snowmelt (p=0.66). Conversely, outflow DOM was 2X more photorecalcitrant than inflow DOM during baseflow (ANOVA, p=0.03) and was strongly related to water residence time (WRT). During baseflow, light exposure increased inflow and outflow DOM bioavailability (p=0.059 and 0.024, respectively) and nutrient limitation (p=0.03 and 0.09, respectively). Combined, these results indicate that WRT in subalpine lakes strongly influences DOM temporal variability and DOM degradation and processing. Thus, lakes can provide temporal stability of DOM and potentially increase both carbon and nutrient uptake by heterotrophs in lake outflows. I then evaluated how global changes could alter hydrologic and nutrient dynamics in a subalpine lake. Model results indicate that the magnitude and timing of snowmelt runoff can have a substantial effect on water and nutrient exports. In phosphorus (P)- limited lakes, increases in inorganic N concentrations within and exported from lakes are likely to occur with increased temperatures and lake WRT. Increases in atmospheric N deposition will further enhance inorganic N exports in P-limited subalpine lakes.
Download or read book Aquatic Sciences and Fisheries Abstracts written by and published by . This book was released on 1989 with total page 1152 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Role of Dissolved Organic Carbon in Determining Bacterial Community Structure and Function in Aquatic Ecosystems written by Moumita Moitra and published by . This book was released on 2012 with total page 283 pages. Available in PDF, EPUB and Kindle. Book excerpt: Dissolved organic carbon (DOC) is the dominant form of organic matter in aquatic ecosystems and bacteria play a key role in its mobilization to higher trophic levels. The DOC pool is often divided into broad classes such as labile or recalcitrant, based on its ease of uptake by bacteria; or as autochthonous and allochthonous, based on its production within or outside the ecosystem. In this dissertation, I examined the relationship between the composition of the DOC pool and bacterial community structure and function. The three research chapters address this relationship in different freshwater ecosystems. In the first research chapter, the effect of presence or absence of Microcystis, a dominant primary producer in the western basin of Lake Erie as well as an autochthonous DOC source, on bacterial community structure and heterotrophic productivity was studied. This study revealed that bacterial responses were independent of the presence of the dominant primary producer. In second research chapter, the effect of compositional diversity of DOC within labile and recalcitrant categories, on stream bacterial community structure and denitrification rates was investigated. Use of different compounds within each category, administered individually and in mixtures, contributed to the heterogeneity. Results of this study suggest molecular heterogeneity of DOC can lead to differences in bacterial structure and denitrification potential. In my final research chapter, bacterial responses to differences in proportion of autochthonous and allochthonous DOC between a river and reservoir ecosystem were compared. The findings of this study demonstrated that, rather than the proportion of the two DOC sources, each source, considered individually, played a more important role in determining bacterial response. Regardless of the study, in all cases bacterial community structure was not linked to function, emphasizing the requirement to study both. The results indicate that differences in DOC quality, rather than the quantity, may play a greater role in determining bacterial responses and that structure and function can be decoupled.
Download or read book Hydrologic and Land Cover Effects on Sources and Fate of In Stream Fluorescent Dissolved Organic Matter written by Baek Soo P. Lee and published by . This book was released on 2015 with total page 147 pages. Available in PDF, EPUB and Kindle. Book excerpt: Dissolved organic matter (DOM) is a critical component of the carbon cycle linking terrestrial and aquatic ecosystems. Although many factors influence DOM fluxes and quality in rivers, controls on DOM compositions in catchments of the western U.S. are poorly understood. UV and fluorescent spectroscopy is a simpler, faster, and less expensive DOM fingerprinting technique compared to techniques, such as nuclear magnetic resonance (NMR) spectroscopy or wet chemical fractionation, and could be useful for characterizing complex DOM chemistry. However, only 1 % of DOM is estimated to be fluorescent, and the utility of UV and fluorescent spectroscopy for DOM characterization needs to be further investigated. This dissertation applied UV and fluorescent spectroscopy to examine hydrologic and land cover controls on DOM chemistry in streams of 45 catchments in the forested headwaters and a mixed landscape of the Willamette River Basin, Oregon, based on two years of monitoring. This dissertation contributes three major findings. First, freezing of water alters DOM chemistry by preferentially precipitating aromatic DOM. Second, UV and fluorescent spectroscopy was able to discriminate DOM delivered from highly processed, proteinrich deep subsurface sources during dry seasons especially in forested headwater streams of the H. J. Andrews Experimental Forest (HJA), where nitrogen inputs are very low. In addition, fluorescent DOM chemistry differed among watersheds with varying forest management history. Third, although fluorescent DOM in a headwater forested system differed among land use history, fluorescent DOM composition did not vary among streams draining a well-mixed landscape of urban, pasture/hay, forest, and agricultural land cover types in the central Willamette River Basin, where nitrogen inputs to streams are relatively high. Dissolved organic carbon (DOC) concentration decreased and the fluorescent index indicated an increase in terrestrial sources of DOM from small (1st and 2nd order) to large (4th to 6th order) streams. A protein-like DOM component that was detected in the headwater forested study site (HJA) was not detected in stream samples from the middle basin study site. These findings indicate that in-stream respiration, fueled by nutrient additions from agriculture runoff, consumes bioavailable, labile DOM (proteins) preferentially relative to more recalcitrant, terrestrial sources of DOM along water flow paths from headwater streams to major rivers. This study shows the clear applicability of the fluorescent characterization of DOM in identifying hydrologic and landscape controls as well as varying DOM chemistry and functions throughout watershed ecosystems.
Download or read book Anthropogenic and Environmental Drivers of the Input and Uptake of Dissolved Organic Matter in Temperate Streams written by Peng Shang and published by . This book was released on 2019 with total page 200 pages. Available in PDF, EPUB and Kindle. Book excerpt: Dissolved organic matter (DOM) is a complex mixture of organic compounds and plays an essential role in regulating substrate and energy flows in aquatic ecosystems. However, environmental factors and biogeochemical mechanisms mediating the supply and uptake of DOM in streams are not well understood. The overarching goal of this dissertation is to assess the effects of the anthropogenic and natural drivers on the amount, source, composition, and fate of DOM in streams. The objective of Chapter II is to understand the effects of agricultural activities on DOM in a regional group of streams in Southeastern Alabama. The main finding is that agricultural land use increases DOC concentration and the proportions of terrestrial and microbial humic DOM compounds in streams, which suggests that agricultural activities accelerate the mobilization of organic matter from topsoils via enhancing oxidation, erosional transport, and shifting soil-to-stream flow paths. The objective of Chapter III is to identify the environmental drivers controlling the supply of terrestrial DOM in a Coastal Plain stream draining a forest-dominated watershed. The main finding is that discharge can be used to predict DOM supply across timescales, but other environmental drivers could be important at a given timescale. Specifically, the event-scale DOM supply is influenced by antecedent hydrological conditions and the duration of storms. At the diurnal scale, DOM variation is driven by physical dilution and concentration due to evapotranspiration. At the seasonal scale, DOM variation is mediated by organic matter availability from litterfall and discharge. The objective of Chapter IV is to determine the rates of natural DOM removal and identify the associated biogeochemical mechanisms in a second-order stream draining a forest-dominated watershed. The results provide the first record simultaneously measuring the uptake characters of humic-like and protein-like DOM, which demonstrates that humic-like DOM has a shorter uptake length and higher uptake velocity than protein-like DOM due to the preferential adsorption of humic-like compounds to benthic sediments. This dissertation improves our understandings of the supply and demand of DOM in subtropical streams in response to human land use and hydrological events, contributing to a greater understanding of the factors mediating the aquatic ecosystem response.
Download or read book Clean Coastal Waters written by National Research Council and published by National Academies Press. This book was released on 2000-08-17 with total page 422 pages. Available in PDF, EPUB and Kindle. Book excerpt: Environmental problems in coastal ecosystems can sometimes be attributed to excess nutrients flowing from upstream watersheds into estuarine settings. This nutrient over-enrichment can result in toxic algal blooms, shellfish poisoning, coral reef destruction, and other harmful outcomes. All U.S. coasts show signs of nutrient over-enrichment, and scientists predict worsening problems in the years ahead. Clean Coastal Waters explains technical aspects of nutrient over-enrichment and proposes both immediate local action by coastal managers and a longer-term national strategy incorporating policy design, classification of affected sites, law and regulation, coordination, and communication. Highlighting the Gulf of Mexico's "Dead Zone," the Pfiesteria outbreak in a tributary of Chesapeake Bay, and other cases, the book explains how nutrients work in the environment, why nitrogen is important, how enrichment turns into over-enrichment, and why some environments are especially susceptible. Economic as well as ecological impacts are examined. In addressing abatement strategies, the committee discusses the importance of monitoring sites, developing useful models of over-enrichment, and setting water quality goals. The book also reviews voluntary programs, mandatory controls, tax incentives, and other policy options for reducing the flow of nutrients from agricultural operations and other sources.
Download or read book Microbial and Photochemical Cycling of Dissolved Organic Matter in Boreal Headwater Streams written by Doreen Franke and published by . This book was released on 2013 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Dissolved organic matter (DOM) is a key global energy source and carbon reservoir that links terrestrial and aquatic biogeochemical cycling. Allochthonous organic matter is abundant in boreal headwater streams, and environmental changes such as variation in nutrient availability and changes to watershed landscape composition have great potential for altering the DOM source, its composition and cycling. This dissertation focuses on two of the main drivers of aquatic carbon and nutrient cycling: the photochemical and the microbial processing of DOM in boreal headwater streams; specifically (i) how the photochemical lability of DOM varies between reaches within headwater streams, among headwater streams and an associated large river reach, (ii) how stream biofilm mineralization may be regulated by watershed organic matter source and composition, increased labile carbon, nitrogen, and phosphorus availability, and (iii) whether algal carbon sources are important to supporting stream biofilms and if such sources influence the use of allochthonous DOM in nutrient-enriched streams. The results suggest changes in landscape and nutrient availability have the potential to alter the photochemical and biogeochemical cycling of DOM. DOM photolability was increased upstream relative to downstream and the river DOM. This may be due to differences in DOM source and composition, and suggests losses in photolabile DOM downstream and in the lower reaches of the watershed. The phototransformation of DOM into low molecular weight compounds and nutrients such as ammonium is likely relevant to the carbon and nutrient cycling in boreal watersheds. Results here further suggest that boreal stream biofilm mineralization of DOM is regulated by watershed DOM source and composition. Labile carbon sources, such as algal inputs, may also play an important role in regulating DOM mineralization and the processing of nutrients by these biofilms. In nutrient-impacted streams, where primary production is high relative to nutrientpoor streams, biofilms may be stimulated to incorporate algal carbon sources. Yet in the boreal streams studied here, added labile carbon rarely enhanced the mineralization of extant stream DOM suggesting autotrophic-heterotrophic interactions represent a more important priming effect relative to changing DOM source in boreal streams.
