Download or read book A Robust and Efficient Framework for Slice to volume Reconstruction written by Junshen Xu and published by . This book was released on 2023 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Volumetric reconstruction in presence of motion is a challenging problem in medical imaging. When imaging moving targets, many modalities are limited to fast 2D imaging techniques that provide cross-sectional snapshots (2D images) of the subject with an attempt to "freeze'' in-plane motion. However, inter-slice movement results in slice misalignment in 3D space, i.e., each image being an independent slice that fails to form a coherent volume for diagnosis and analysis. To this end, slice-to-volume reconstruction (SVR) has been proposed to reconstruct a high-quality 3D volume from misaligned 2D observations by performing inter-slice motion correction and super-resolution reconstruction. Existing SVR algorithms, however, have a limited capture range of slice motion and are time-consuming, particularly when producing high-resolution volumes. This thesis proposes a motion-robust and efficient machine learning framework for SVR, motivated by the application of magnetic resonance imaging (MRI) in assessing fetal brain development. We first introduce a slice-to-volume registration transformer that models input slices as a sequence and performs inter-slice motion correction by simultaneously predicting rigid transformations of all images in 3D space. We then reformulate the reconstruction problem using implicit neural representation, where the underlying volume is represented by a continuous function of 3D coordinates. This resolution-agnostic approach allows efficient reconstruction of high-resolution volumes. Finally, we extend this method to data that suffer from non-rigid motion by introducing an implicit motion field that captures slice-dependent deformation. These advances together enable robust and efficient 3D reconstruction and visualization in fetal MRI, benefiting diagnosis and downstream analysis. Additionally, the proposed framework has the potential for broader clinical implications in various applications that involve similar volumetric reconstruction problems.

Download or read book Fetal MRI written by Daniela Prayer and published by Springer Science & Business Media. This book was released on 2011-02-15 with total page 531 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the most comprehensive book to be written on the subject of fetal MRI. It provides a practical hands-on approach to the use of state-of-the-art MRI techniques and the optimization of sequences. Fetal pathological conditions and methods of prenatal MRI diagnosis are discussed by organ system, and the available literature is reviewed. Interpretation of findings and potential artifacts are thoroughly considered with the aid of numerous high-quality illustrations. In addition, the implications of fetal MRI are explored from the medico-legal and ethical points of view. This book will serve as a detailed resource for radiologists, obstetricians, neonatologists, geneticists, and any practitioner wanting to gain an in-depth understanding of fetal MRI technology and applications. In addition, it will provide a reference source for technologists, researchers, students, and those who are implementing a fetal MRI service in their own facility.

Download or read book Medical Image Computing and Computer Assisted Intervention MICCAI 2018 written by Alejandro F. Frangi and published by Springer. This book was released on 2018-09-13 with total page 918 pages. Available in PDF, EPUB and Kindle. Book excerpt: The four-volume set LNCS 11070, 11071, 11072, and 11073 constitutes the refereed proceedings of the 21st International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2018, held in Granada, Spain, in September 2018. The 373 revised full papers presented were carefully reviewed and selected from 1068 submissions in a double-blind review process. The papers have been organized in the following topical sections: Part I: Image Quality and Artefacts; Image Reconstruction Methods; Machine Learning in Medical Imaging; Statistical Analysis for Medical Imaging; Image Registration Methods. Part II: Optical and Histology Applications: Optical Imaging Applications; Histology Applications; Microscopy Applications; Optical Coherence Tomography and Other Optical Imaging Applications. Cardiac, Chest and Abdominal Applications: Cardiac Imaging Applications: Colorectal, Kidney and Liver Imaging Applications; Lung Imaging Applications; Breast Imaging Applications; Other Abdominal Applications. Part III: Diffusion Tensor Imaging and Functional MRI: Diffusion Tensor Imaging; Diffusion Weighted Imaging; Functional MRI; Human Connectome. Neuroimaging and Brain Segmentation Methods: Neuroimaging; Brain Segmentation Methods. Part IV: Computer Assisted Intervention: Image Guided Interventions and Surgery; Surgical Planning, Simulation and Work Flow Analysis; Visualization and Augmented Reality. Image Segmentation Methods: General Image Segmentation Methods, Measures and Applications; Multi-Organ Segmentation; Abdominal Segmentation Methods; Cardiac Segmentation Methods; Chest, Lung and Spine Segmentation; Other Segmentation Applications.

Download or read book Machine Learning in Medical Imaging written by Mingxia Liu and published by Springer Nature. This book was released on 2020-10-02 with total page 702 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the proceedings of the 11th International Workshop on Machine Learning in Medical Imaging, MLMI 2020, held in conjunction with MICCAI 2020, in Lima, Peru, in October 2020. The conference was held virtually due to the COVID-19 pandemic. The 68 papers presented in this volume were carefully reviewed and selected from 101 submissions. They focus on major trends and challenges in the above-mentioned area, aiming to identify new-cutting-edge techniques and their uses in medical imaging. Topics dealt with are: deep learning, generative adversarial learning, ensemble learning, sparse learning, multi-task learning, multi-view learning, manifold learning, and reinforcement learning, with their applications to medical image analysis, computer-aided detection and diagnosis, multi-modality fusion, image reconstruction, image retrieval, cellular image analysis, molecular imaging, digital pathology, etc.

Download or read book Medical Image Computing and Computer Assisted Intervention MICCAI 2019 written by Dinggang Shen and published by Springer Nature. This book was released on 2019-10-10 with total page 888 pages. Available in PDF, EPUB and Kindle. Book excerpt: The six-volume set LNCS 11764, 11765, 11766, 11767, 11768, and 11769 constitutes the refereed proceedings of the 22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019, held in Shenzhen, China, in October 2019. The 539 revised full papers presented were carefully reviewed and selected from 1730 submissions in a double-blind review process. The papers are organized in the following topical sections: Part I: optical imaging; endoscopy; microscopy. Part II: image segmentation; image registration; cardiovascular imaging; growth, development, atrophy and progression. Part III: neuroimage reconstruction and synthesis; neuroimage segmentation; diffusion weighted magnetic resonance imaging; functional neuroimaging (fMRI); miscellaneous neuroimaging. Part IV: shape; prediction; detection and localization; machine learning; computer-aided diagnosis; image reconstruction and synthesis. Part V: computer assisted interventions; MIC meets CAI. Part VI: computed tomography; X-ray imaging.

Download or read book Medical Image Computing and Computer Assisted Intervention MICCAI 2020 written by Anne L. Martel and published by Springer Nature. This book was released on 2020-10-02 with total page 785 pages. Available in PDF, EPUB and Kindle. Book excerpt: The seven-volume set LNCS 12261, 12262, 12263, 12264, 12265, 12266, and 12267 constitutes the refereed proceedings of the 23rd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2020, held in Lima, Peru, in October 2020. The conference was held virtually due to the COVID-19 pandemic. The 542 revised full papers presented were carefully reviewed and selected from 1809 submissions in a double-blind review process. The papers are organized in the following topical sections: Part I: machine learning methodologies Part II: image reconstruction; prediction and diagnosis; cross-domain methods and reconstruction; domain adaptation; machine learning applications; generative adversarial networks Part III: CAI applications; image registration; instrumentation and surgical phase detection; navigation and visualization; ultrasound imaging; video image analysis Part IV: segmentation; shape models and landmark detection Part V: biological, optical, microscopic imaging; cell segmentation and stain normalization; histopathology image analysis; opthalmology Part VI: angiography and vessel analysis; breast imaging; colonoscopy; dermatology; fetal imaging; heart and lung imaging; musculoskeletal imaging Part VI: brain development and atlases; DWI and tractography; functional brain networks; neuroimaging; positron emission tomography

Download or read book Magnetic Resonance Image Reconstruction written by Mehmet Akcakaya and published by Academic Press. This book was released on 2022-11-04 with total page 518 pages. Available in PDF, EPUB and Kindle. Book excerpt: Magnetic Resonance Image Reconstruction: Theory, Methods and Applications presents the fundamental concepts of MR image reconstruction, including its formulation as an inverse problem, as well as the most common models and optimization methods for reconstructing MR images. The book discusses approaches for specific applications such as non-Cartesian imaging, under sampled reconstruction, motion correction, dynamic imaging and quantitative MRI. This unique resource is suitable for physicists, engineers, technologists and clinicians with an interest in medical image reconstruction and MRI. - Explains the underlying principles of MRI reconstruction, along with the latest research - Gives example codes for some of the methods presented - Includes updates on the latest developments, including compressed sensing, tensor-based reconstruction and machine learning based reconstruction

Download or read book Medical Image Computing and Computer Assisted Intervention MICCAI 2014 written by Polina Golland and published by Springer. This book was released on 2014-08-31 with total page 854 pages. Available in PDF, EPUB and Kindle. Book excerpt: The three-volume set LNCS 8673, 8674, and 8675 constitutes the refereed proceedings of the 17th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2014, held in Boston, MA, USA, in September 2014. Based on rigorous peer reviews, the program committee carefully selected 253 revised papers from 862 submissions for presentation in three volumes. The 100 papers included in the second volume have been organized in the following topical sections: biophysical modeling and simulation; atlas-based transfer of boundary conditions for biomechanical simulation; temporal and motion modeling; computer-aided diagnosis; pediatric imaging; endoscopy; ultrasound imaging; machine learning; cardiovascular imaging; intervention planning and guidance; and brain.

Download or read book Perinatal Preterm and Paediatric Image Analysis written by Daphna Link-Sourani and published by Springer Nature. This book was released on with total page 172 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Reconstruction Segmentation and Analysis of Medical Images written by Maria A. Zuluaga and published by Springer. This book was released on 2017-01-18 with total page 177 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of two workshops held at the 19th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2016, in Athens, Greece, in October 2016: the First International Workshop on Reconstruction and Analysis of Moving Body Organs, RAMBO 2016, and the First International Workshop on Whole-Heart and Great Vessel Segmentation from 3D Cardiovascular MRI in Congenital Heart Disease, HVSMR 2016. The 17 revised regular papers presented in this book were carefully reviewed and selected from a total of 21 submissions. The papers cover following topics: Registration; Reconstruction; Deep learning for heart segmentation; Discrete optimization and probabilistic intensity modeling; Atlas-based strategies; Random forests.

Download or read book Molecular Imaging Reconstruction and Analysis of Moving Body Organs and Stroke Imaging and Treatment written by M. Jorge Cardoso and published by Springer. This book was released on 2017-09-06 with total page 196 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed joint proceedings of the International Workshop on Computational Methods for Molecular Imaging, CMMI 2017, the International Workshop on Reconstruction and Analysis of Moving Body Organs, RAMBO 2017, and the International Stroke Workshop: Imaging and Treatment Challenges, SWITCH 2017, held in conjunction with the 20th International Conference on Medical Imaging and Computer-Assisted Intervention, MICCAI 2017, in Québec City, QC, Canada, in September 2017. The 5 full papers presented at FIFI 2017, the 9 full papers presented at RAMBO 2017, and the 4 full papers presented at SWITCH 2017 were carefully reviewed and selected. The CMMI papers cover various areas from image synthesis to data analysis and from clinical diagnosis to therapy individualization, using molecular imaging modalities PET, SPECT, PET/CT, SPECT/CT, and PET/MR. The RAMBO papers present research from both academia and industry, They are organized into the categories "registration and tracking" and "image reconstruction and information retrieval" while application areas include cardiac, pulmonal, abdominal, fetal, and renal imaging. The SWITCH papers focus on CT(A)-based quantitative imaging biomarkers for stroke.

Download or read book Medical Image Registration written by Joseph V. Hajnal and published by CRC Press. This book was released on 2001-06-27 with total page 394 pages. Available in PDF, EPUB and Kindle. Book excerpt: Image registration is the process of systematically placing separate images in a common frame of reference so that the information they contain can be optimally integrated or compared. This is becoming the central tool for image analysis, understanding, and visualization in both medical and scientific applications. Medical Image Registration provid

Download or read book Perinatal Preterm and Paediatric Image Analysis written by Roxane Licandro and published by Springer Nature. This book was released on 2022-09-22 with total page 128 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the First International Workshop on Perinatal, Preterm and Paediatric Image Analysis, PIPPI 2022, held in conjunction with the 25th International Conference on Medical Imaging and Computer-Assisted Intervention, MICCAI 2022, in Singapore, Singapore, in September 2021. The 10 full papers and 1 short papers presented at PIPPI 2022 were carefully reviewed and selected from 12 submissions. PIPPI 2022 workshop complements the main MICCAI conference by providing a focused discussion of perinatal and paediatric image analysis, including the application of sophisticated analysis tools to fetal, neonatal and paediatric imaging data.

Download or read book Statistical Parametric Mapping The Analysis of Functional Brain Images written by William D. Penny and published by Elsevier. This book was released on 2011-04-28 with total page 689 pages. Available in PDF, EPUB and Kindle. Book excerpt: In an age where the amount of data collected from brain imaging is increasing constantly, it is of critical importance to analyse those data within an accepted framework to ensure proper integration and comparison of the information collected. This book describes the ideas and procedures that underlie the analysis of signals produced by the brain. The aim is to understand how the brain works, in terms of its functional architecture and dynamics. This book provides the background and methodology for the analysis of all types of brain imaging data, from functional magnetic resonance imaging to magnetoencephalography. Critically, Statistical Parametric Mapping provides a widely accepted conceptual framework which allows treatment of all these different modalities. This rests on an understanding of the brain's functional anatomy and the way that measured signals are caused experimentally. The book takes the reader from the basic concepts underlying the analysis of neuroimaging data to cutting edge approaches that would be difficult to find in any other source. Critically, the material is presented in an incremental way so that the reader can understand the precedents for each new development. This book will be particularly useful to neuroscientists engaged in any form of brain mapping; who have to contend with the real-world problems of data analysis and understanding the techniques they are using. It is primarily a scientific treatment and a didactic introduction to the analysis of brain imaging data. It can be used as both a textbook for students and scientists starting to use the techniques, as well as a reference for practicing neuroscientists. The book also serves as a companion to the software packages that have been developed for brain imaging data analysis. - An essential reference and companion for users of the SPM software - Provides a complete description of the concepts and procedures entailed by the analysis of brain images - Offers full didactic treatment of the basic mathematics behind the analysis of brain imaging data - Stands as a compendium of all the advances in neuroimaging data analysis over the past decade - Adopts an easy to understand and incremental approach that takes the reader from basic statistics to state of the art approaches such as Variational Bayes - Structured treatment of data analysis issues that links different modalities and models - Includes a series of appendices and tutorial-style chapters that makes even the most sophisticated approaches accessible

Download or read book Encyclopedia of Image Processing written by Phillip A. Laplante and published by CRC Press. This book was released on 2018-11-08 with total page 1890 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Encyclopedia of Image Processing presents a vast collection of well-written articles covering image processing fundamentals (e.g. color theory, fuzzy sets, cryptography) and applications (e.g. geographic information systems, traffic analysis, forgery detection). Image processing advances have enabled many applications in healthcare, avionics, robotics, natural resource discovery, and defense, which makes this text a key asset for both academic and industrial libraries and applied scientists and engineers working in any field that utilizes image processing. Written by experts from both academia and industry, it is structured using the ACM Computing Classification System (CCS) first published in 1988, but most recently updated in 2012.

Download or read book Medical Image Computing and Computer Assisted Intervention MICCAI 2021 written by Marleen de Bruijne and published by Springer Nature. This book was released on 2021-09-22 with total page 658 pages. Available in PDF, EPUB and Kindle. Book excerpt: The eight-volume set LNCS 12901, 12902, 12903, 12904, 12905, 12906, 12907, and 12908 constitutes the refereed proceedings of the 24th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2021, held in Strasbourg, France, in September/October 2021.* The 531 revised full papers presented were carefully reviewed and selected from 1630 submissions in a double-blind review process. The papers are organized in the following topical sections: Part I: image segmentation Part II: machine learning - self-supervised learning; machine learning - semi-supervised learning; and machine learning - weakly supervised learning Part III: machine learning - advances in machine learning theory; machine learning - attention models; machine learning - domain adaptation; machine learning - federated learning; machine learning - interpretability / explainability; and machine learning - uncertainty Part IV: image registration; image-guided interventions and surgery; surgical data science; surgical planning and simulation; surgical skill and work flow analysis; and surgical visualization and mixed, augmented and virtual reality Part V: computer aided diagnosis; integration of imaging with non-imaging biomarkers; and outcome/disease prediction Part VI: image reconstruction; clinical applications - cardiac; and clinical applications - vascular Part VII: clinical applications - abdomen; clinical applications - breast; clinical applications - dermatology; clinical applications - fetal imaging; clinical applications - lung; clinical applications - neuroimaging - brain development; clinical applications - neuroimaging - DWI and tractography; clinical applications - neuroimaging - functional brain networks; clinical applications - neuroimaging – others; and clinical applications - oncology Part VIII: clinical applications - ophthalmology; computational (integrative) pathology; modalities - microscopy; modalities - histopathology; and modalities - ultrasound *The conference was held virtually.

Download or read book Uncertainty for Safe Utilization of Machine Learning in Medical Imaging and Perinatal Imaging Placental and Preterm Image Analysis written by Carole H. Sudre and published by Springer Nature. This book was released on 2021-09-30 with total page 306 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the Third Second International Workshop on Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, UNSURE 2021, and the 6th International Workshop on Preterm, Perinatal and Paediatric Image Analysis, PIPPI 2021, held in conjunction with MICCAI 2021. The conference was planned to take place in Strasbourg, France, but was held virtually due to the COVID-19 pandemic.For UNSURE 2021, 13 papers from 18 submissions were accepted for publication. They focus on developing awareness and encouraging research in the field of uncertainty modelling to enable safe implementation of machine learning tools in the clinical world. PIPPI 2021 accepted 14 papers from the 18 submissions received. The workshop aims to bring together methods and experience from researchers and authors working on these younger cohorts and provides a forum for the open discussion of advanced image analysis approaches focused on the analysis of growth and development in the fetal, infant and paediatric period.