Download or read book The Theory of the Chemostat written by Hal L. Smith and published by Cambridge University Press. This book was released on 1995-01-27 with total page 334 pages. Available in PDF, EPUB and Kindle. Book excerpt: Basic modelling, analysis and simulation of systems that have proven effective in real ecological applications.
Download or read book The Chemostat written by Jérôme Harmand and published by John Wiley & Sons. This book was released on 2017-07-19 with total page 246 pages. Available in PDF, EPUB and Kindle. Book excerpt: Invented by J. Monod, and independently by A. Novick and L. Szilard, in 1950, the chemostat is both a micro-organism culturing device and an abstracted ecosystem managed by a controlled nutrient flow. This book studies mathematical models of single species growth as well as competition models of multiple species by integrating recent work in theoretical ecology and population dynamics. Through a modeling approach, the hypotheses and conclusions drawn from the main mathematical results are analyzed and interpreted from a critical perspective. A large emphasis is placed on numerical simulations of which prudent use is advocated. The Chemostat is aimed at readers possessing degree-level mathematical knowledge and includes a detailed appendix of differential equations relating to specific notions and results used throughout this book.
Download or read book Dynamics of the Chemostat written by Abdelhamid Ajbar and published by CRC Press. This book was released on 2011-08-09 with total page 370 pages. Available in PDF, EPUB and Kindle. Book excerpt: A ubiquitous tool in mathematical biology and chemical engineering, the chemostat often produces instabilities that pose safety hazards and adversely affect the optimization of bioreactive systems. Singularity theory and bifurcation diagrams together offer a useful framework for addressing these issues. Based on the authors’ extensive work in this field, Dynamics of the Chemostat: A Bifurcation Theory Approach explores the use of bifurcation theory to analyze the static and dynamic behavior of the chemostat. Introduction The authors first survey the major work that has been carried out on the stability of continuous bioreactors. They next present the modeling approaches used for bioreactive systems, the different kinetic expressions for growth rates, and tools, such as multiplicity, bifurcation, and singularity theory, for analyzing nonlinear systems. Application The text moves on to the static and dynamic behavior of the basic unstructured model of the chemostat for constant and variable yield coefficients as well as in the presence of wall attachment. It then covers the dynamics of interacting species, including pure and simple microbial competition, biodegradation of mixed substrates, dynamics of plasmid-bearing and plasmid-free recombinant cultures, and dynamics of predator–prey interactions. The authors also examine dynamics of the chemostat with product formation for various growth models, provide examples of bifurcation theory for studying the operability and dynamics of continuous bioreactor models, and apply elementary concepts of bifurcation theory to analyze the dynamics of a periodically forced bioreactor. Using singularity theory and bifurcation techniques, this book presents a cohesive mathematical framework for analyzing and modeling the macro- and microscopic interactions occurring in chemostats. The text includes models that describe the intracellular and operating elements of the bioreactive system. It also explains the mathematical theory behind the models.
Download or read book The Chemostat written by Jérôme Harmand and published by John Wiley & Sons. This book was released on 2017-07-18 with total page 223 pages. Available in PDF, EPUB and Kindle. Book excerpt: Invented by J. Monod, and independently by A. Novick and L. Szilard, in 1950, the chemostat is both a micro-organism culturing device and an abstracted ecosystem managed by a controlled nutrient flow. This book studies mathematical models of single species growth as well as competition models of multiple species by integrating recent work in theoretical ecology and population dynamics. Through a modeling approach, the hypotheses and conclusions drawn from the main mathematical results are analyzed and interpreted from a critical perspective. A large emphasis is placed on numerical simulations of which prudent use is advocated. The Chemostat is aimed at readers possessing degree-level mathematical knowledge and includes a detailed appendix of differential equations relating to specific notions and results used throughout this book.
Download or read book Introduction to Mathematical Biology written by Ching Shan Chou and published by Springer. This book was released on 2016-04-27 with total page 174 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is based on a one semester course that the authors have been teaching for several years, and includes two sets of case studies. The first includes chemostat models, predator-prey interaction, competition among species, the spread of infectious diseases, and oscillations arising from bifurcations. In developing these topics, readers will also be introduced to the basic theory of ordinary differential equations, and how to work with MATLAB without having any prior programming experience. The second set of case studies were adapted from recent and current research papers to the level of the students. Topics have been selected based on public health interest. This includes the risk of atherosclerosis associated with high cholesterol levels, cancer and immune interactions, cancer therapy, and tuberculosis. Readers will experience how mathematical models and their numerical simulations can provide explanations that guide biological and biomedical research. Considered to be the undergraduate companion to the more advanced book "Mathematical Modeling of Biological Processes" (A. Friedman, C.-Y. Kao, Springer – 2014), this book is geared towards undergraduate students with little background in mathematics and no biological background.
Download or read book Dynamic Energy Budget Theory for Metabolic Organisation written by S. A. L. M. Kooijman and published by Cambridge University Press. This book was released on 2010 with total page 533 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Dynamic Energy Budget theory unifies the commonalities between organisms and links different levels of biological organisation.
Download or read book Elements of Mathematical Ecology written by Mark Kot and published by Cambridge University Press. This book was released on 2001-07-19 with total page 466 pages. Available in PDF, EPUB and Kindle. Book excerpt: Elements of Mathematical Ecology provides an introduction to classical and modern mathematical models, methods, and issues in population ecology. The first part of the book is devoted to simple, unstructured population models that ignore much of the variability found in natural populations for the sake of tractability. Topics covered include density dependence, bifurcations, demographic stochasticity, time delays, population interactions (predation, competition, and mutualism), and the application of optimal control theory to the management of renewable resources. The second part of this book is devoted to structured population models, covering spatially-structured population models (with a focus on reaction-diffusion models), age-structured models, and two-sex models. Suitable for upper level students and beginning researchers in ecology, mathematical biology and applied mathematics, the volume includes numerous clear line diagrams that clarify the mathematics, relevant problems thoughout the text that aid understanding, and supplementary mathematical and historical material that enrich the main text.
Download or read book Dynamical Systems in Population Biology written by Xiao-Qiang Zhao and published by Springer Science & Business Media. This book was released on 2013-06-05 with total page 285 pages. Available in PDF, EPUB and Kindle. Book excerpt: Population dynamics is an important subject in mathematical biology. A cen tral problem is to study the long-term behavior of modeling systems. Most of these systems are governed by various evolutionary equations such as difference, ordinary, functional, and partial differential equations (see, e. g. , [165, 142, 218, 119, 55]). As we know, interactive populations often live in a fluctuating environment. For example, physical environmental conditions such as temperature and humidity and the availability of food, water, and other resources usually vary in time with seasonal or daily variations. Therefore, more realistic models should be nonautonomous systems. In particular, if the data in a model are periodic functions of time with commensurate period, a periodic system arises; if these periodic functions have different (minimal) periods, we get an almost periodic system. The existing reference books, from the dynamical systems point of view, mainly focus on autonomous biological systems. The book of Hess [106J is an excellent reference for periodic parabolic boundary value problems with applications to population dynamics. Since the publication of this book there have been extensive investigations on periodic, asymptotically periodic, almost periodic, and even general nonautonomous biological systems, which in turn have motivated further development of the theory of dynamical systems. In order to explain the dynamical systems approach to periodic population problems, let us consider, as an illustration, two species periodic competitive systems dUI dt = !I(t,Ul,U2), (0.
Download or read book Adaptive Diversification written by Michael Doebeli and published by Princeton University Press. This book was released on 2011-08-01 with total page 346 pages. Available in PDF, EPUB and Kindle. Book excerpt: Understanding the mechanisms driving biological diversity remains a central problem in ecology and evolutionary biology. Traditional explanations assume that differences in selection pressures lead to different adaptations in geographically separated locations. This book takes a different approach and explores adaptive diversification--diversification rooted in ecological interactions and frequency-dependent selection. In any ecosystem, birth and death rates of individuals are affected by interactions with other individuals. What is an advantageous phenotype therefore depends on the phenotype of other individuals, and it may often be best to be ecologically different from the majority phenotype. Such rare-type advantage is a hallmark of frequency-dependent selection and opens the scope for processes of diversification that require ecological contact rather than geographical isolation. Michael Doebeli investigates adaptive diversification using the mathematical framework of adaptive dynamics. Evolutionary branching is a paradigmatic feature of adaptive dynamics that serves as a basic metaphor for adaptive diversification, and Doebeli explores the scope of evolutionary branching in many different ecological scenarios, including models of coevolution, cooperation, and cultural evolution. He also uses alternative modeling approaches. Stochastic, individual-based models are particularly useful for studying adaptive speciation in sexual populations, and partial differential equation models confirm the pervasiveness of adaptive diversification. Showing that frequency-dependent interactions are an important driver of biological diversity, Adaptive Diversification provides a comprehensive theoretical treatment of adaptive diversification.
Download or read book Differential Equations and Control Theory written by Z. Deng and published by CRC Press. This book was released on 2020-11-25 with total page 543 pages. Available in PDF, EPUB and Kindle. Book excerpt: This work presents the proceedings from the International Conference on Differential Equations and Control Theory, held recently in Wuhan, China. It provides an overview of current developments in a range of topics including dynamical systems, optimal control theory, stochastic control, chaos, fractals, wavelets and ordinary, partial, functional and stochastic differential equations.
Download or read book Random Ordinary Differential Equations and Their Numerical Solution written by Xiaoying Han and published by Springer. This book was released on 2017-10-25 with total page 252 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is intended to make recent results on the derivation of higher order numerical schemes for random ordinary differential equations (RODEs) available to a broader readership, and to familiarize readers with RODEs themselves as well as the closely associated theory of random dynamical systems. In addition, it demonstrates how RODEs are being used in the biological sciences, where non-Gaussian and bounded noise are often more realistic than the Gaussian white noise in stochastic differential equations (SODEs). RODEs are used in many important applications and play a fundamental role in the theory of random dynamical systems. They can be analyzed pathwise with deterministic calculus, but require further treatment beyond that of classical ODE theory due to the lack of smoothness in their time variable. Although classical numerical schemes for ODEs can be used pathwise for RODEs, they rarely attain their traditional order since the solutions of RODEs do not have sufficient smoothness to have Taylor expansions in the usual sense. However, Taylor-like expansions can be derived for RODEs using an iterated application of the appropriate chain rule in integral form, and represent the starting point for the systematic derivation of consistent higher order numerical schemes for RODEs. The book is directed at a wide range of readers in applied and computational mathematics and related areas as well as readers who are interested in the applications of mathematical models involving random effects, in particular in the biological sciences.The level of this book is suitable for graduate students in applied mathematics and related areas, computational sciences and systems biology. A basic knowledge of ordinary differential equations and numerical analysis is required.
Download or read book Introduction to Polyphasic Dispersed Systems Theory written by Jacques Thierie and published by Springer. This book was released on 2015-12-30 with total page 210 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book introduces a new paradigm in system description and modelling. The author shows the theoretical and practical successes of his approach, which involves replacing a traditional uniform description with a polyphasic description. This change of perspective reveals new fluxes that are cryptic in the classical description. Several case studies are given in this book, which is of interest of those working with biotechnology and green chemistry.
Download or read book Bioprocess Engineering written by Shijie Liu and published by Newnes. This book was released on 2012-11-21 with total page 1001 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bioprocess Engineering involves the design and development of equipment and processes for the manufacturing of products such as food, feed, pharmaceuticals, nutraceuticals, chemicals, and polymers and paper from biological materials. It also deals with studying various biotechnological processes. "Bioprocess Kinetics and Systems Engineering" first of its kind contains systematic and comprehensive content on bioprocess kinetics, bioprocess systems, sustainability and reaction engineering. Dr. Shijie Liu reviews the relevant fundamentals of chemical kinetics-including batch and continuous reactors, biochemistry, microbiology, molecular biology, reaction engineering, and bioprocess systems engineering- introducing key principles that enable bioprocess engineers to engage in the analysis, optimization, design and consistent control over biological and chemical transformations. The quantitative treatment of bioprocesses is the central theme of this book, while more advanced techniques and applications are covered with some depth. Many theoretical derivations and simplifications are used to demonstrate how empirical kinetic models are applicable to complicated bioprocess systems. - Contains extensive illustrative drawings which make the understanding of the subject easy - Contains worked examples of the various process parameters, their significance and their specific practical use - Provides the theory of bioprocess kinetics from simple concepts to complex metabolic pathways - Incorporates sustainability concepts into the various bioprocesses
Download or read book Bacterial Physiology written by C. H. Werkman and published by Elsevier. This book was released on 2013-10-22 with total page 724 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bacterial Physiology focuses on the physiology and chemistry of microorganisms and the value of bacterial physiology in the other fields of biology. The selection first underscores the chemistry and structure of bacterial cells, including the chemical composition of cells, direct and indirect methods of cytology, vegetative multiplication, spores of bacteria, and cell structure. The text then elaborates on inheritance, variation, and adaptation and growth of bacteria. The publication reviews the physical and chemical factors affecting growth and death. Topics include hydrogen ion concentration and osmotic pressure; surface and other forces determining the distribution of bacteria in their environment; dynamics of disinfection and bacteriostasis; bacterial resistance; and types of antibacterial agents. The text also ponders on the anaerobic dissimilation of carbohydrates, bacterial oxidations, and autotrophic assimilation of carbon dioxide. The selection is a dependable reference for readers interested in bacterial physiology.
Download or read book Stochastic Chemical Reaction Systems in Biology written by Hong Qian and published by Springer Nature. This book was released on 2021-10-18 with total page 364 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides an introduction to the analysis of stochastic dynamic models in biology and medicine. The main aim is to offer a coherent set of probabilistic techniques and mathematical tools which can be used for the simulation and analysis of various biological phenomena. These tools are illustrated on a number of examples. For each example, the biological background is described, and mathematical models are developed following a unified set of principles. These models are then analyzed and, finally, the biological implications of the mathematical results are interpreted. The biological topics covered include gene expression, biochemistry, cellular regulation, and cancer biology. The book will be accessible to graduate students who have a strong background in differential equations, the theory of nonlinear dynamical systems, Markovian stochastic processes, and both discrete and continuous state spaces, and who are familiar with the basic concepts of probability theory.
Download or read book An Introduction to Delay Differential Equations with Applications to the Life Sciences written by hal smith and published by Springer Science & Business Media. This book was released on 2010-09-29 with total page 178 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is intended to be an introduction to Delay Differential Equations for upper level undergraduates or beginning graduate mathematics students who have a reasonable background in ordinary differential equations and who would like to get to the applications quickly. The author has used preliminary notes in teaching such a course at Arizona State University over the past two years. This book focuses on the key tools necessary to understand the applications literature involving delay equations and to construct and analyze mathematical models involving delay differential equations. The book begins with a survey of mathematical models involving delay equations.
Download or read book Nonlinear Systems Of Partial Differential Equations Applications To Life And Physical Sciences written by Anthony W Leung and published by World Scientific. This book was released on 2009-08-28 with total page 545 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book presents the theory of diffusion-reaction equations starting from the Volterra-Lotka systems developed in the eighties for Dirichlet boundary conditions. It uses the analysis of applicable systems of partial differential equations as a starting point for studying upper-lower solutions, bifurcation, degree theory and other nonlinear methods. It also illustrates the use of semigroup, stability theorems and W2ptheory. Introductory explanations are included in the appendices for non-expert readers.The first chapter covers a wide range of steady-state and stability results involving prey-predator, competing and cooperating species under strong or weak interactions. Many diagrams are included to easily understand the description of the range of parameters for coexistence. The book provides a comprehensive presentation of topics developed by numerous researchers. Large complex systems are introduced for modern research in ecology, medicine and engineering.Chapter 3 combines the theories of earlier chapters with the optimal control of systems involving resource management and fission reactors. This is the first book to present such topics at research level. Chapter 4 considers persistence, cross-diffusion, and boundary induced blow-up, etc. The book also covers traveling or systems of waves, coupled Navier-Stokes and Maxwell systems, and fluid equations of plasma display. These should be of interest to life and physical scientists.
