Download or read book THE APPLIED DATA SCIENCE WORKSHOP Prostate Cancer Classification and Recognition Using Machine Learning and Deep Learning with Python GUI written by Vivian Siahaan and published by BALIGE PUBLISHING. This book was released on 2023-07-19 with total page 357 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Applied Data Science Workshop on Prostate Cancer Classification and Recognition using Machine Learning and Deep Learning with Python GUI involved several steps and components. The project aimed to analyze prostate cancer data, explore the features, develop machine learning models, and create a graphical user interface (GUI) using PyQt5. The project began with data exploration, where the prostate cancer dataset was examined to understand its structure and content. Various statistical techniques were employed to gain insights into the data, such as checking the dimensions, identifying missing values, and examining the distribution of the target variable. The next step involved exploring the distribution of features in the dataset. Visualizations were created to analyze the characteristics and relationships between different features. Histograms, scatter plots, and correlation matrices were used to uncover patterns and identify potential variables that may contribute to the classification of prostate cancer. Machine learning models were then developed to classify prostate cancer based on the available features. Several algorithms, including Logistic Regression, K-Nearest Neighbors, Decision Trees, Random Forests, Gradient Boosting, Naive Bayes, Adaboost, Extreme Gradient Boosting, Light Gradient Boosting, and Multi-Layer Perceptron (MLP), were implemented. Each model was trained and evaluated using appropriate techniques such as cross-validation and grid search for hyperparameter tuning. The performance of each machine learning model was assessed using evaluation metrics such as accuracy, precision, recall, and F1-score. These metrics provided insights into the effectiveness of the models in accurately classifying prostate cancer cases. Model comparison and selection were based on their performance and the specific requirements of the project. In addition to the machine learning models, a deep learning model based on an Artificial Neural Network (ANN) was implemented. The ANN architecture consisted of multiple layers, including input, hidden, and output layers. The ANN model was trained using the dataset, and its performance was evaluated using accuracy and loss metrics. To provide a user-friendly interface for the project, a GUI was designed using PyQt, a Python library for creating desktop applications. The GUI allowed users to interact with the machine learning models and perform tasks such as selecting the prediction method, loading data, training models, and displaying results. The GUI included various graphical components such as buttons, combo boxes, input fields, and plot windows. These components were designed to facilitate data loading, model training, and result visualization. Users could choose the prediction method, view accuracy scores, classification reports, and confusion matrices, and explore the predicted values compared to the actual values. The GUI also incorporated interactive features such as real-time updates of prediction results based on user selections and dynamic plot generation for visualizing model performance. Users could switch between different prediction methods, observe changes in accuracy, and examine the history of training loss and accuracy through plotted graphs. Data preprocessing techniques, such as standardization and normalization, were applied to ensure the consistency and reliability of the machine learning and deep learning models. The dataset was divided into training and testing sets to assess model performance on unseen data and detect overfitting or underfitting. Model persistence was implemented to save the trained machine learning and deep learning models to disk, allowing for easy retrieval and future use. The saved models could be loaded and utilized within the GUI for prediction tasks without the need for retraining. Overall, the Applied Data Science Workshop on Prostate Cancer Classification and Recognition provided a comprehensive framework for analyzing prostate cancer data, developing machine learning and deep learning models, and creating an interactive GUI. The project aimed to assist in the accurate classification and recognition of prostate cancer cases, facilitating informed decision-making and potentially contributing to improved patient outcomes.

Download or read book PYTHON GUI PROJECTS WITH MACHINE LEARNING AND DEEP LEARNING written by Vivian Siahaan and published by BALIGE PUBLISHING. This book was released on 2022-01-16 with total page 917 pages. Available in PDF, EPUB and Kindle. Book excerpt: PROJECT 1: THE APPLIED DATA SCIENCE WORKSHOP: Prostate Cancer Classification and Recognition Using Machine Learning and Deep Learning with Python GUI Prostate cancer is cancer that occurs in the prostate. The prostate is a small walnut-shaped gland in males that produces the seminal fluid that nourishes and transports sperm. Prostate cancer is one of the most common types of cancer. Many prostate cancers grow slowly and are confined to the prostate gland, where they may not cause serious harm. However, while some types of prostate cancer grow slowly and may need minimal or even no treatment, other types are aggressive and can spread quickly. The dataset used in this project consists of 100 patients which can be used to implement the machine learning and deep learning algorithms. The dataset consists of 100 observations and 10 variables (out of which 8 numeric variables and one categorical variable and is ID) which are as follows: Id, Radius, Texture, Perimeter, Area, Smoothness, Compactness, Diagnosis Result, Symmetry, and Fractal Dimension. The models used in this project are K-Nearest Neighbor, Random Forest, Naive Bayes, Logistic Regression, Decision Tree, Support Vector Machine, Adaboost, LGBM classifier, Gradient Boosting, XGB classifier, MLP classifier, and CNN 1D. Finally, you will develop a GUI using PyQt5 to plot boundary decision, ROC, distribution of features, feature importance, cross validation score, and predicted values versus true values, confusion matrix, learning curve, performance of the model, scalability of the model, training loss, and training accuracy. PROJECT 2: THE APPLIED DATA SCIENCE WORKSHOP: Urinary Biomarkers Based Pancreatic Cancer Classification and Prediction Using Machine Learning with Python GUI Pancreatic cancer is an extremely deadly type of cancer. Once diagnosed, the five-year survival rate is less than 10%. However, if pancreatic cancer is caught early, the odds of surviving are much better. Unfortunately, many cases of pancreatic cancer show no symptoms until the cancer has spread throughout the body. A diagnostic test to identify people with pancreatic cancer could be enormously helpful. In a paper by Silvana Debernardi and colleagues, published this year in the journal PLOS Medicine, a multi-national team of researchers sought to develop an accurate diagnostic test for the most common type of pancreatic cancer, called pancreatic ductal adenocarcinoma or PDAC. They gathered a series of biomarkers from the urine of three groups of patients: Healthy controls, Patients with non-cancerous pancreatic conditions, like chronic pancreatitis, and Patients with pancreatic ductal adenocarcinoma. When possible, these patients were age- and sex-matched. The goal was to develop an accurate way to identify patients with pancreatic cancer. The key features are four urinary biomarkers: creatinine, LYVE1, REG1B, and TFF1. Creatinine is a protein that is often used as an indicator of kidney function. YVLE1 is lymphatic vessel endothelial hyaluronan receptor 1, a protein that may play a role in tumor metastasis. REG1B is a protein that may be associated with pancreas regeneration. TFF1 is trefoil factor 1, which may be related to regeneration and repair of the urinary tract. The models used in this project are K-Nearest Neighbor, Random Forest, Naive Bayes, Logistic Regression, Decision Tree, Support Vector Machine, Adaboost, LGBM classifier, Gradient Boosting, XGB classifier, and MLP classifier. Finally, you will develop a GUI using PyQt5 to plot boundary decision, ROC, distribution of features, feature importance, cross validation score, and predicted values versus true values, confusion matrix, learning curve, performance of the model, scalability of the model, training loss, and training accuracy. PROJECT 3: DATA SCIENCE CRASH COURSE: Voice Based Gender Classification and Prediction Using Machine Learning and Deep Learning with Python GUI This dataset was created to identify a voice as male or female, based upon acoustic properties of the voice and speech. The dataset consists of 3,168 recorded voice samples, collected from male and female speakers. The voice samples are pre-processed by acoustic analysis in R using the seewave and tuneR packages, with an analyzed frequency range of 0hz-280hz (human vocal range). The following acoustic properties of each voice are measured and included within the CSV: meanfreq: mean frequency (in kHz); sd: standard deviation of frequency; median: median frequency (in kHz); Q25: first quantile (in kHz); Q75: third quantile (in kHz); IQR: interquantile range (in kHz); skew: skewness; kurt: kurtosis; sp.ent: spectral entropy; sfm: spectral flatness; mode: mode frequency; centroid: frequency centroid (see specprop); peakf: peak frequency (frequency with highest energy); meanfun: average of fundamental frequency measured across acoustic signal; minfun: minimum fundamental frequency measured across acoustic signal; maxfun: maximum fundamental frequency measured across acoustic signal; meandom: average of dominant frequency measured across acoustic signal; mindom: minimum of dominant frequency measured across acoustic signal; maxdom: maximum of dominant frequency measured across acoustic signal; dfrange: range of dominant frequency measured across acoustic signal; modindx: modulation index. Calculated as the accumulated absolute difference between adjacent measurements of fundamental frequencies divided by the frequency range; and label: male or female. The models used in this project are K-Nearest Neighbor, Random Forest, Naive Bayes, Logistic Regression, Decision Tree, Support Vector Machine, Adaboost, LGBM classifier, Gradient Boosting, XGB classifier, MLP classifier, and CNN 1D. Finally, you will develop a GUI using PyQt5 to plot boundary decision, ROC, distribution of features, feature importance, cross validation score, and predicted values versus true values, confusion matrix, learning curve, performance of the model, scalability of the model, training loss, and training accuracy. PROJECT 4: DATA SCIENCE CRASH COURSE: Thyroid Disease Classification and Prediction Using Machine Learning and Deep Learning with Python GUI Thyroid disease is a general term for a medical condition that keeps your thyroid from making the right amount of hormones. Thyroid typically makes hormones that keep body functioning normally. When the thyroid makes too much thyroid hormone, body uses energy too quickly. The two main types of thyroid disease are hypothyroidism and hyperthyroidism. Both conditions can be caused by other diseases that impact the way the thyroid gland works. Dataset used in this project was from Garavan Institute Documentation as given by Ross Quinlan 6 databases from the Garavan Institute in Sydney, Australia. Approximately the following for each database: 2800 training (data) instances and 972 test instances. This dataset contains plenty of missing data, while 29 or so attributes, either Boolean or continuously-valued. The models used in this project are K-Nearest Neighbor, Random Forest, Naive Bayes, Logistic Regression, Decision Tree, Support Vector Machine, Adaboost, LGBM classifier, Gradient Boosting, XGB classifier, MLP classifier, and CNN 1D. Finally, you will develop a GUI using PyQt5 to plot boundary decision, ROC, distribution of features, feature importance, cross validation score, and predicted values versus true values, confusion matrix, learning curve, performance of the model, scalability of the model, training loss, and training accuracy.

Download or read book THE APPLIED DATA SCIENCE WORKSHOP Urinary biomarkers Based Pancreatic Cancer Classification and Prediction Using Machine Learning with Python GUI written by Vivian Siahaan and published by BALIGE PUBLISHING. This book was released on 2023-07-23 with total page 327 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Applied Data Science Workshop on "Urinary Biomarkers-Based Pancreatic Cancer Classification and Prediction Using Machine Learning with Python GUI" embarks on a comprehensive journey, commencing with an in-depth exploration of the dataset. During this initial phase, the structure and size of the dataset are thoroughly examined, and the various features it contains are meticulously studied. The principal objective is to understand the relationship between these features and the target variable, which, in this case, is the diagnosis of pancreatic cancer. The distribution of each feature is analyzed, and potential patterns, trends, or outliers that could significantly impact the model's performance are identified. To ensure the data is in optimal condition for model training, preprocessing steps are undertaken. This involves handling missing values through imputation techniques, such as mean, median, or interpolation, depending on the nature of the data. Additionally, feature engineering is performed to derive new features or transform existing ones, with the aim of enhancing the model's predictive power. In preparation for model building, the dataset is split into training and testing sets. This division is crucial to assess the models' generalization performance on unseen data accurately. To maintain a balanced representation of classes in both sets, stratified sampling is employed, mitigating potential biases in the model evaluation process. The workshop explores an array of machine learning classifiers suitable for pancreatic cancer classification, such as Logistic Regression, K-Nearest Neighbors, Decision Trees, Random Forests, Gradient Boosting, Naive Bayes, Adaboost, Extreme Gradient Boosting, Light Gradient Boosting, Naïve Bayes, and Multi-Layer Perceptron (MLP). For each classifier, three different preprocessing techniques are applied to investigate their impact on model performance: raw (unprocessed data), normalization (scaling data to a similar range), and standardization (scaling data to have zero mean and unit variance). To optimize the classifiers' hyperparameters and boost their predictive capabilities, GridSearchCV, a technique for hyperparameter tuning, is employed. GridSearchCV conducts an exhaustive search over a specified hyperparameter grid, evaluating different combinations to identify the optimal settings for each model and preprocessing technique. During the model evaluation phase, multiple performance metrics are utilized to gauge the efficacy of the classifiers. Commonly used metrics include accuracy, recall, precision, and F1-score. By comprehensively assessing these metrics, the strengths and weaknesses of each model are revealed, enabling a deeper understanding of their performance across different classes of pancreatic cancer. Classification reports are generated to present a detailed breakdown of the models' performance, including precision, recall, F1-score, and support for each class. These reports serve as valuable tools for interpreting model outputs and identifying areas for potential improvement. The workshop highlights the significance of graphical user interfaces (GUIs) in facilitating user interactions with machine learning models. By integrating PyQt, a powerful GUI development library for Python, participants create a user-friendly interface that enables users to interact with the models effortlessly. The GUI provides options to select different preprocessing techniques, visualize model outputs such as confusion matrices and decision boundaries, and gain insights into the models' classification capabilities. One of the primary advantages of the graphical user interface is its ability to offer users a seamless and intuitive experience in predicting and classifying pancreatic cancer based on urinary biomarkers. The GUI empowers users to make informed decisions by allowing them to compare the performance of different classifiers under various preprocessing techniques. Throughout the workshop, a strong emphasis is placed on the significance of proper data preprocessing, hyperparameter tuning, and robust model evaluation. These crucial steps contribute to building accurate and reliable machine learning models for pancreatic cancer prediction. By the culmination of the workshop, participants have gained valuable hands-on experience in data exploration, machine learning model building, hyperparameter tuning, and GUI development, all geared towards addressing the specific challenge of pancreatic cancer classification and prediction. In conclusion, the Applied Data Science Workshop on "Urinary Biomarkers-Based Pancreatic Cancer Classification and Prediction Using Machine Learning with Python GUI" embarks on a comprehensive and transformative journey, bringing together data exploration, preprocessing, machine learning model selection, hyperparameter tuning, model evaluation, and GUI development. The project's focus on pancreatic cancer prediction using urinary biomarkers aligns with the pressing need for early detection and treatment of this deadly disease. As participants delve into the intricacies of machine learning and medical research, they contribute to the broader scientific community's ongoing efforts to combat cancer and improve patient outcomes. Through the integration of data science methodologies and powerful visualization tools, the workshop exemplifies the potential of machine learning in revolutionizing medical diagnostics and healthcare practices.

Download or read book The Applied Data Science Workshop On Medical Datasets Using Machine Learning and Deep Learning with Python GUI written by Vivian Siahaan and published by BALIGE PUBLISHING. This book was released on with total page 1574 pages. Available in PDF, EPUB and Kindle. Book excerpt: Workshop 1: Heart Failure Analysis and Prediction Using Scikit-Learn, Keras, and TensorFlow with Python GUI Cardiovascular diseases (CVDs) are the number 1 cause of death globally taking an estimated 17.9 million lives each year, which accounts for 31% of all deaths worldwide. Heart failure is a common event caused by CVDs and this dataset contains 12 features that can be used to predict mortality by heart failure. People with cardiovascular disease or who are at high cardiovascular risk (due to the presence of one or more risk factors such as hypertension, diabetes, hyperlipidaemia or already established disease) need early detection and management wherein a machine learning models can be of great help. Dataset used in this project is from Davide Chicco, Giuseppe Jurman. Machine learning can predict survival of patients with heart failure from serum creatinine and ejection fraction alone. BMC Medical Informatics and Decision Making 20, 16 (2020). Attribute information in the dataset are as follows: age: Age; anaemia: Decrease of red blood cells or hemoglobin (boolean); creatinine_phosphokinase: Level of the CPK enzyme in the blood (mcg/L); diabetes: If the patient has diabetes (boolean); ejection_fraction: Percentage of blood leaving the heart at each contraction (percentage); high_blood_pressure: If the patient has hypertension (boolean); platelets: Platelets in the blood (kiloplatelets/mL); serum_creatinine: Level of serum creatinine in the blood (mg/dL); serum_sodium: Level of serum sodium in the blood (mEq/L); sex: Woman or man (binary); smoking: If the patient smokes or not (boolean); time: Follow-up period (days); and DEATH_EVENT: If the patient deceased during the follow-up period (boolean). The models used in this project are K-Nearest Neighbor, Random Forest, Naive Bayes, Logistic Regression, Decision Tree, Support Vector Machine, Adaboost, LGBM classifier, Gradient Boosting, XGB classifier, MLP classifier, and CNN 1D. Finally, you will develop a GUI using PyQt5 to plot boundary decision, ROC, distribution of features, feature importance, cross validation score, and predicted values versus true values, confusion matrix, learning curve, performace of the model, scalability of the model, training loss, and training accuracy. WORKSHOP 2: Cervical Cancer Classification and Prediction Using Machine Learning and Deep Learning with Python GUI About 11,000 new cases of invasive cervical cancer are diagnosed each year in the U.S. However, the number of new cervical cancer cases has been declining steadily over the past decades. Although it is the most preventable type of cancer, each year cervical cancer kills about 4,000 women in the U.S. and about 300,000 women worldwide. Numerous studies report that high poverty levels are linked with low screening rates. In addition, lack of health insurance, limited transportation, and language difficulties hinder a poor woman’s access to screening services. Human papilloma virus (HPV) is the main risk factor for cervical cancer. In adults, the most important risk factor for HPV is sexual activity with an infected person. Women most at risk for cervical cancer are those with a history of multiple sexual partners, sexual intercourse at age 17 years or younger, or both. A woman who has never been sexually active has a very low risk for developing cervical cancer. Sexual activity with multiple partners increases the likelihood of many other sexually transmitted infections (chlamydia, gonorrhea, syphilis). Studies have found an association between chlamydia and cervical cancer risk, including the possibility that chlamydia may prolong HPV infection. Therefore, early detection of cervical cancer using machine and deep learning models can be of great help. The dataset used in this project is obtained from UCI Repository and kindly acknowledged. This file contains a List of Risk Factors for Cervical Cancer leading to a Biopsy Examination. The models used in this project are K-Nearest Neighbor, Random Forest, Naive Bayes, Logistic Regression, Decision Tree, Support Vector Machine, Adaboost, LGBM classifier, Gradient Boosting, XGB classifier, MLP classifier, and CNN 1D. Finally, you will develop a GUI using PyQt5 to plot boundary decision, ROC, distribution of features, feature importance, cross validation score, and predicted values versus true values, confusion matrix, learning curve, performace of the model, scalability of the model, training loss, and training accuracy. WORKSHOP 3: Chronic Kidney Disease Classification and Prediction Using Machine Learning and Deep Learning with Python GUI Chronic kidney disease is the longstanding disease of the kidneys leading to renal failure. The kidneys filter waste and excess fluid from the blood. As kidneys fail, waste builds up. Symptoms develop slowly and aren't specific to the disease. Some people have no symptoms at all and are diagnosed by a lab test. Medication helps manage symptoms. In later stages, filtering the blood with a machine (dialysis) or a transplant may be required The dataset used in this project was taken over a 2-month period in India with 25 features (eg, red blood cell count, white blood cell count, etc). The target is the 'classification', which is either 'ckd' or 'notckd' - ckd=chronic kidney disease. It contains measures of 24 features for 400 people. Quite a lot of features for just 400 samples. There are 14 categorical features, while 10 are numerical. The dataset needs cleaning: in that it has NaNs and the numeric features need to be forced to floats. Attribute Information: Age(numerical) age in years; Blood Pressure(numerical) bp in mm/Hg; Specific Gravity(categorical) sg - (1.005,1.010,1.015,1.020,1.025); Albumin(categorical) al - (0,1,2,3,4,5); Sugar(categorical) su - (0,1,2,3,4,5); Red Blood Cells(categorical) rbc - (normal,abnormal); Pus Cell (categorical) pc - (normal,abnormal); Pus Cell clumps(categorical) pcc - (present, notpresent); Bacteria(categorical) ba - (present,notpresent); Blood Glucose Random(numerical) bgr in mgs/dl; Blood Urea(numerical) bu in mgs/dl; Serum Creatinine(numerical) sc in mgs/dl; Sodium(numerical) sod in mEq/L; Potassium(numerical) pot in mEq/L; Hemoglobin(numerical) hemo in gms; Packed Cell Volume(numerical); White Blood Cell Count(numerical) wc in cells/cumm; Red Blood Cell Count(numerical) rc in millions/cmm; Hypertension(categorical) htn - (yes,no); Diabetes Mellitus(categorical) dm - (yes,no); Coronary Artery Disease(categorical) cad - (yes,no); Appetite(categorical) appet - (good,poor); Pedal Edema(categorical) pe - (yes,no); Anemia(categorical) ane - (yes,no); and Class (categorical) class - (ckd,notckd). The models used in this project are K-Nearest Neighbor, Random Forest, Naive Bayes, Logistic Regression, Decision Tree, Support Vector Machine, Adaboost, LGBM classifier, Gradient Boosting, XGB classifier, MLP classifier, and CNN 1D. Finally, you will develop a GUI using PyQt5 to plot boundary decision, ROC, distribution of features, feature importance, cross validation score, and predicted values versus true values, confusion matrix, learning curve, performace of the model, scalability of the model, training loss, and training accuracy. WORKSHOP 4: Lung Cancer Classification and Prediction Using Machine Learning and Deep Learning with Python GUI The effectiveness of cancer prediction system helps the people to know their cancer risk with low cost and it also helps the people to take the appropriate decision based on their cancer risk status. The data is collected from the website online lung cancer prediction system. Total number of attributes in the dataset is 16, while number of instances is 309. Following are attribute information of dataset: Gender: M(male), F(female); Age: Age of the patient; Smoking: YES=2 , NO=1; Yellow fingers: YES=2 , NO=1; Anxiety: YES=2 , NO=1; Peer_pressure: YES=2 , NO=1; Chronic Disease: YES=2 , NO=1; Fatigue: YES=2 , NO=1; Allergy: YES=2 , NO=1; Wheezing: YES=2 , NO=1; Alcohol: YES=2 , NO=1; Coughing: YES=2 , NO=1; Shortness of Breath: YES=2 , NO=1; Swallowing Difficulty: YES=2 , NO=1; Chest pain: YES=2 , NO=1; and Lung Cancer: YES , NO. The models used in this project are K-Nearest Neighbor, Random Forest, Naive Bayes, Logistic Regression, Decision Tree, Support Vector Machine, Adaboost, LGBM classifier, Gradient Boosting, XGB classifier, MLP classifier, and CNN 1D. Finally, you will develop a GUI using PyQt5 to plot boundary decision, ROC, distribution of features, feature importance, cross validation score, and predicted values versus true values, confusion matrix, learning curve, performace of the model, scalability of the model, training loss, and training accuracy. WORKSHOP 5: Alzheimer’s Disease Classification and Prediction Using Machine Learning and Deep Learning with Python GUI Alzheimer's is a type of dementia that causes problems with memory, thinking and behavior. Symptoms usually develop slowly and get worse over time, becoming severe enough to interfere with daily tasks. Alzheimer's is not a normal part of aging. The greatest known risk factor is increasing age, and the majority of people with Alzheimer's are 65 and older. But Alzheimer's is not just a disease of old age. Approximately 200,000 Americans under the age of 65 have younger-onset Alzheimer’s disease (also known as early-onset Alzheimer’s). The dataset consists of a longitudinal MRI data of 374 subjects aged 60 to 96. Each subject was scanned at least once. Everyone is right-handed. 206 of the subjects were grouped as 'Nondemented' throughout the study. 107 of the subjects were grouped as 'Demented' at the time of their initial visits and remained so throughout the study. 14 subjects were grouped as 'Nondemented' at the time of their initial visit and were subsequently characterized as 'Demented' at a later visit. These fall under the 'Converted' category. Following are some important features in the dataset: EDUC:Years of Education; SES: Socioeconomic Status; MMSE: Mini Mental State Examination; CDR: Clinical Dementia Rating; eTIV: Estimated Total Intracranial Volume; nWBV: Normalize Whole Brain Volume; and ASF: Atlas Scaling Factor. The models used in this project are K-Nearest Neighbor, Random Forest, Naive Bayes, Logistic Regression, Decision Tree, Support Vector Machine, Adaboost, LGBM classifier, Gradient Boosting, XGB classifier, MLP classifier, and CNN 1D. Finally, you will develop a GUI using PyQt5 to plot boundary decision, ROC, distribution of features, feature importance, cross validation score, and predicted values versus true values, confusion matrix, learning curve, performance of the model, scalability of the model, training loss, and training accuracy. WORKSHOP 6: Parkinson Classification and Prediction Using Machine Learning and Deep Learning with Python GUI The dataset was created by Max Little of the University of Oxford, in collaboration with the National Centre for Voice and Speech, Denver, Colorado, who recorded the speech signals. The original study published the feature extraction methods for general voice disorders. This dataset is composed of a range of biomedical voice measurements from 31 people, 23 with Parkinson's disease (PD). Each column in the table is a particular voice measure, and each row corresponds one of 195 voice recording from these individuals ("name" column). The main aim of the data is to discriminate healthy people from those with PD, according to "status" column which is set to 0 for healthy and 1 for PD. The data is in ASCII CSV format. The rows of the CSV file contain an instance corresponding to one voice recording. There are around six recordings per patient, the name of the patient is identified in the first column. Attribute information of this dataset are as follows: name - ASCII subject name and recording number; MDVP:Fo(Hz) - Average vocal fundamental frequency; MDVP:Fhi(Hz) - Maximum vocal fundamental frequency; MDVP:Flo(Hz) - Minimum vocal fundamental frequency; MDVP:Jitter(%); MDVP:Jitter(Abs); MDVP:RAP; MDVP:PPQ; Jitter:DDP – Several measures of variation in fundamental frequency; MDVP:Shimmer; MDVP:Shimmer(dB); Shimmer:APQ3; Shimmer:APQ5; MDVP:APQ; Shimmer:DDA - Several measures of variation in amplitude; NHR; HNR - Two measures of ratio of noise to tonal components in the voice; status - Health status of the subject (one) - Parkinson's, (zero) – healthy; RPDE,D2 - Two nonlinear dynamical complexity measures; DFA - Signal fractal scaling exponent; and spread1,spread2,PPE - Three nonlinear measures of fundamental frequency variation. The models used in this project are K-Nearest Neighbor, Random Forest, Naive Bayes, Logistic Regression, Decision Tree, Support Vector Machine, Adaboost, LGBM classifier, Gradient Boosting, XGB classifier, MLP classifier, and CNN 1D. Finally, you will develop a GUI using PyQt5 to plot boundary decision, ROC, distribution of features, feature importance, cross validation score, and predicted values versus true values, confusion matrix, learning curve, performance of the model, scalability of the model, training loss, and training accuracy. WORKSHOP 7: Liver Disease Classification and Prediction Using Machine Learning and Deep Learning with Python GUI Patients with Liver disease have been continuously increasing because of excessive consumption of alcohol, inhale of harmful gases, intake of contaminated food, pickles and drugs. This dataset was used to evaluate prediction algorithms in an effort to reduce burden on doctors. This dataset contains 416 liver patient records and 167 non liver patient records collected from North East of Andhra Pradesh, India. The "Dataset" column is a class label used to divide groups into liver patient (liver disease) or not (no disease). This data set contains 441 male patient records and 142 female patient records. Any patient whose age exceeded 89 is listed as being of age "90". Columns in the dataset: Age of the patient; Gender of the patient; Total Bilirubin; Direct Bilirubin; Alkaline Phosphotase; Alamine Aminotransferase; Aspartate Aminotransferase; Total Protiens; Albumin; Albumin and Globulin Ratio; and Dataset: field used to split the data into two sets (patient with liver disease, or no disease). The models used in this project are K-Nearest Neighbor, Random Forest, Naive Bayes, Logistic Regression, Decision Tree, Support Vector Machine, Adaboost, LGBM classifier, Gradient Boosting, XGB classifier, MLP classifier, and CNN 1D. Finally, you will develop a GUI using PyQt5 to plot boundary decision, ROC, distribution of features, feature importance, cross validation score, and predicted values versus true values, confusion matrix, learning curve, performance of the model, scalability of the model, training loss, and training accuracy.

Download or read book DATA SCIENCE WORKSHOP Lung Cancer Classification and Prediction Using Machine Learning and Deep Learning with Python GUI written by Vivian Siahaan and published by BALIGE PUBLISHING. This book was released on 2023-08-12 with total page 294 pages. Available in PDF, EPUB and Kindle. Book excerpt: This Data Science Workshop presents a comprehensive journey through lung cancer analysis. Beginning with data exploration, the dataset is thoroughly examined to uncover insights into its structure and contents. The focus then shifts to categorizing features and understanding their distribution patterns, revealing key trends and relationships that could impact the predictive models. To predict lung cancer using machine learning models, an extensive grid search is conducted, fine-tuning model hyperparameters for optimal performance. The iterative process involves training various models, such as K-Nearest Neighbors, Decision Trees, Random Forests, Gradient Boosting, Naive Bayes, Extreme Gradient Boosting, Light Gradient Boosting, and Multi-Layer Perceptron, and evaluating their outcomes to select the best-performing approach. Utilizing GridSearchCV aids in systematically optimizing parameters to enhance predictive accuracy. Deep Learning is harnessed through Artificial Neural Networks (ANN), which involve building multi-layered models capable of learning intricate patterns from data. The ANN architecture, comprising input, hidden, and output layers, is designed to capture the complex relationships within the dataset. Metrics like accuracy, precision, recall, and F1-score are employed to comprehensively evaluate model performance. These metrics provide a holistic view of the model's ability to classify lung cancer cases accurately and minimize false positives or negatives. The Graphical User Interface (GUI) aspect of the project is developed using PyQt, enabling user-friendly interactions with the predictive models. The GUI design includes features such as radio buttons for selecting preprocessing options (Raw, Normalization, or Standardization), a combobox for choosing the ANN model type (e.g., CNN 1D), and buttons to initiate training and prediction. The PyQt interface enhances usability by allowing users to visualize predictions, classification reports, confusion matrices, and loss-accuracy plots. The GUI's functionality expands to encompass the entire workflow. It enables data preprocessing by loading and splitting the dataset into training and testing subsets. Users can then select machine learning or deep learning models for training. The trained models are saved for future use to avoid retraining. The interface also facilitates model evaluation, showcasing accuracy scores, classification reports detailing precision and recall, and visualizations depicting loss and accuracy trends over epochs. The project's educational value lies in its comprehensive approach, taking participants through every step of a data science pipeline. Attendees gain insights into data preprocessing, model selection, hyperparameter tuning, and performance evaluation. The integration of machine learning and deep learning methodologies, along with GUI development, provides a well-rounded understanding of creating predictive tools for real-world applications. Participants leave the workshop empowered with the skills to explore and analyze medical datasets, implement machine learning and deep learning models, and build user-friendly interfaces for effective interaction. The workshop bridges the gap between theoretical knowledge and practical implementation, fostering a deeper understanding of data-driven decision-making in the realm of medical diagnostics and classification.

Download or read book DATA SCIENCE WORKSHOP Cervical Cancer Classification and Prediction Using Machine Learning and Deep Learning with Python GUI written by Vivian Siahaan and published by BALIGE PUBLISHING. This book was released on 2023-08-13 with total page 348 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book titled " Data Science Workshop: Cervical Cancer Classification and Prediction using Machine Learning and Deep Learning with Python GUI" embarks on an insightful journey starting with an in-depth exploration of the dataset. This dataset encompasses various features that shed light on patients' medical histories and attributes. Utilizing the capabilities of pandas, the dataset is loaded, and essential details like data dimensions, column names, and data types are scrutinized. The presence of missing data is addressed by employing suitable strategies such as mean-based imputation for numerical features and categorical encoding for non-numeric ones. Subsequently, the project delves into an illuminating visualization of categorized feature distributions. Through the ingenious use of pie charts, bar plots, and heatmaps, the project unveils the distribution patterns of key attributes such as 'Hormonal Contraceptives,' 'Smokes,' 'IUD,' and others. These visualizations illuminate potential relationships between these features and the target variable 'Biopsy,' which signifies the presence or absence of cervical cancer. Such exploratory analyses serve as a vital foundation for identifying influential trends within the dataset. Transitioning into the core phase of predictive modeling, the workshop orchestrates a meticulous ensemble of machine learning models to forecast cervical cancer outcomes. The repertoire includes Logistic Regression, Decision Trees, Random Forests, Support Vector Machines (SVM), K-Nearest Neighbors (KNN), Gradient Boosting, Naïve Bayes, and the power of ensemble methods like AdaBoost and XGBoost. The models undergo rigorous hyperparameter tuning facilitated by Grid Search and Random Search to optimize predictive accuracy and precision. As the workshop progresses, the spotlight shifts to the realm of deep learning, introducing advanced neural network architectures. An Artificial Neural Network (ANN) featuring multiple hidden layers is trained using the backpropagation algorithm. Long Short-Term Memory (LSTM) networks are harnessed to capture intricate temporal relationships within the data. The arsenal extends to include Self Organizing Maps (SOMs), Restricted Boltzmann Machines (RBMs), and Autoencoders, showcasing the efficacy of unsupervised feature learning and dimensionality reduction techniques. The evaluation phase emerges as a pivotal aspect, accentuated by an array of comprehensive metrics. Performance assessment encompasses metrics such as accuracy, precision, recall, F1-score, and ROC-AUC. Cross-validation and learning curves are strategically employed to mitigate overfitting and ensure model generalization. Furthermore, visual aids such as ROC curves and confusion matrices provide a lucid depiction of the models' interplay between sensitivity and specificity. Culminating on a high note, the workshop concludes with the creation of a Python GUI utilizing PyQt. This intuitive graphical user interface empowers users to input pertinent medical data and receive instant predictions regarding their cervical cancer risk. Seamlessly integrating the most proficient classification model, this user-friendly interface bridges the gap between sophisticated data science techniques and practical healthcare applications. In this comprehensive workshop, participants navigate through the intricate landscape of data exploration, preprocessing, feature visualization, predictive modeling encompassing both traditional and deep learning paradigms, robust performance evaluation, and culminating in the development of an accessible and informative GUI. The project aspires to provide healthcare professionals and individuals with a potent tool for early cervical cancer detection and prognosis.

Download or read book BRAIN TUMOR Analysis Classification and Detection Using Machine Learning and Deep Learning with Python GUI written by Vivian Siahaan and published by BALIGE PUBLISHING. This book was released on 2023-06-24 with total page 332 pages. Available in PDF, EPUB and Kindle. Book excerpt: In this book, you will learn how to use Scikit-Learn, TensorFlow, Keras, NumPy, Pandas, Seaborn, and other libraries to implement brain tumor classification and detection with machine learning using Brain Tumor dataset provided by Kaggle. this dataset contains five first order features: Mean (the contribution of individual pixel intensity for the entire image), Variance (used to find how each pixel varies from the neighboring pixel 0, Standard Deviation (the deviation of measured Values or the data from its mean), Skewness (measures of symmetry), and Kurtosis (describes the peak of e.g. a frequency distribution). it also contains eight second order features: Contrast, Energy, ASM (Angular second moment), Entropy, Homogeneity, Dissimilarity, Correlation, and Coarseness. In this project, various methods and functionalities related to machine learning and deep learning are covered. Here is a summary of the process: Data Preprocessing: Loaded and preprocessed the dataset using various techniques such as feature scaling, encoding categorical variables, and splitting the dataset into training and testing sets.; Feature Selection: Implemented feature selection techniques such as SelectKBest, Recursive Feature Elimination, and Principal Component Analysis to select the most relevant features for the model.; Model Training and Evaluation: Trained and evaluated multiple machine learning models such as Random Forest, AdaBoost, Gradient Boosting, Logistic Regression, and Support Vector Machines using cross-validation and hyperparameter tuning. Implemented ensemble methods like Voting Classifier and Stacking Classifier to combine the predictions of multiple models. Calculated evaluation metrics such as accuracy, precision, recall, F1-score, and mean squared error for each model. Visualized the predictions and confusion matrix for the models using plotting techniques.; Deep Learning Model Building and Training: Built deep learning models using architectures such as MobileNet and ResNet50 for image classification tasks. Compiled and trained the models using appropriate loss functions, optimizers, and metrics. Saved the trained models and their training history for future use.; Visualization and Interaction: Implemented methods to plot the training loss and accuracy curves during model training. Created interactive widgets for displaying prediction results and confusion matrices. Linked the selection of prediction options in combo boxes to trigger the corresponding prediction and visualization functions.; Throughout the process, various libraries and frameworks such as scikit-learn, TensorFlow, and Keras are used to perform the tasks efficiently. The overall goal was to train models, evaluate their performance, visualize the results, and provide an interactive experience for the user to explore different prediction options.

Download or read book DATA SCIENCE CRASH COURSE Skin Cancer Classification and Prediction Using Machine Learning and Deep Learning written by Vivian Siahaan and published by BALIGE PUBLISHING. This book was released on 2022-02-01 with total page 85 pages. Available in PDF, EPUB and Kindle. Book excerpt: Skin cancer develops primarily on areas of sun-exposed skin, including the scalp, face, lips, ears, neck, chest, arms and hands, and on the legs in women. But it can also form on areas that rarely see the light of day — your palms, beneath your fingernails or toenails, and your genital area. Skin cancer affects people of all skin tones, including those with darker complexions. When melanoma occurs in people with dark skin tones, it's more likely to occur in areas not normally exposed to the sun, such as the palms of the hands and soles of the feet. Dataset used in this project contains a balanced dataset of images of benign skin moles and malignant skin moles. The data consists of two folders with each 1800 pictures (224x244) of the two types of moles. The machine learning models used in this project are K-Nearest Neighbor, Random Forest, Naive Bayes, Logistic Regression, Decision Tree, Support Vector Machine, Adaboost, LGBM classifier, Gradient Boosting, XGB classifier, MLP classifier, and CNN 1D. The deep learning models used are CNN and MobileNet.

Download or read book DATA SCIENCE CRASH COURSE Thyroid Disease Classification and Prediction Using Machine Learning and Deep Learning with Python GUI written by Vivian Siahaan and published by BALIGE PUBLISHING. This book was released on 2023-07-17 with total page 412 pages. Available in PDF, EPUB and Kindle. Book excerpt: Thyroid disease is a prevalent condition that affects the thyroid gland, leading to various health issues. In this session of the Data Science Crash Course, we will explore the classification and prediction of thyroid disease using machine learning and deep learning techniques, all implemented with the power of Python and a user-friendly GUI built with PyQt. We will start by conducting data exploration on a comprehensive dataset containing relevant features and thyroid disease labels. Through analysis and pattern recognition, we will gain insights into the underlying factors contributing to thyroid disease. Next, we will delve into the machine learning phase, where we will implement popular algorithms including Support Vector, Logistic Regression, K-Nearest Neighbors (KNN), Decision Tree, Random Forest, Gradient Boosting, Light Gradient Boosting, Naive Bayes, Adaboost, Extreme Gradient Boosting, and Multi-Layer Perceptron. These models will be trained using different preprocessing techniques, including raw data, normalization, and standardization, to evaluate their performance and accuracy. We train each model on the training dataset and evaluate its performance using appropriate metrics such as accuracy, precision, recall, and F1-score. This helps us assess how well the models can predict stroke based on the given features. To optimize the models' performance, we perform hyperparameter tuning using techniques like grid search or randomized search. This involves systematically exploring different combinations of hyperparameters to find the best configuration for each model. After training and tuning the models, we save them to disk using joblib. This allows us to reuse the trained models for future predictions without having to train them again. Moving beyond traditional machine learning, we will build an artificial neural network (ANN) using TensorFlow. This ANN will capture complex relationships within the data and provide accurate predictions of thyroid disease. To ensure the effectiveness of our ANN, we will train it using a curated dataset split into training and testing sets. This will allow us to evaluate the model's performance and its ability to generalize predictions. To provide an interactive and user-friendly experience, we will develop a Graphical User Interface (GUI) using PyQt. The GUI will allow users to input data, select prediction methods (machine learning or deep learning), and visualize the results. Through the GUI, users can explore different prediction methods, compare performance, and gain insights into thyroid disease classification. Visualizations of training and validation loss, accuracy, and confusion matrices will enhance understanding and model evaluation. Line plots comparing true values and predicted values will further aid interpretation and insights into classification outcomes. Throughout the project, we will emphasize the importance of preprocessing techniques, feature selection, and model evaluation in building reliable and effective thyroid disease classification and prediction models. By the end of the project, readers will have gained practical knowledge in data exploration, machine learning, deep learning, and GUI development. They will be equipped to apply these techniques to other domains and real-world challenges. The project’s comprehensive approach, from data exploration to model development and GUI implementation, ensures a holistic understanding of thyroid disease classification and prediction. It empowers readers to explore applications of data science in healthcare and beyond. The combination of machine learning and deep learning techniques, coupled with the intuitive GUI, offers a powerful framework for thyroid disease classification and prediction. This project serves as a stepping stone for readers to contribute to the field of medical data science. Data-driven approaches in healthcare have the potential to unlock valuable insights and improve outcomes. The focus on thyroid disease classification and prediction in this session showcases the transformative impact of data science in the medical field. Together, let us embark on this journey to advance our understanding of thyroid disease and make a difference in the lives of individuals affected by this condition. Welcome to the Data Science Crash Course on Thyroid Disease Classification and Prediction!

Download or read book Applied Deep Learning with Python written by Alex Galea and published by Packt Publishing Ltd. This book was released on 2018-08-31 with total page 317 pages. Available in PDF, EPUB and Kindle. Book excerpt: A hands-on guide to deep learning that’s filled with intuitive explanations and engaging practical examples Key Features Designed to iteratively develop the skills of Python users who don’t have a data science background Covers the key foundational concepts you’ll need to know when building deep learning systems Full of step-by-step exercises and activities to help build the skills that you need for the real-world Book Description Taking an approach that uses the latest developments in the Python ecosystem, you’ll first be guided through the Jupyter ecosystem, key visualization libraries and powerful data sanitization techniques before we train our first predictive model. We’ll explore a variety of approaches to classification like support vector networks, random decision forests and k-nearest neighbours to build out your understanding before we move into more complex territory. It’s okay if these terms seem overwhelming; we’ll show you how to put them to work. We’ll build upon our classification coverage by taking a quick look at ethical web scraping and interactive visualizations to help you professionally gather and present your analysis. It’s after this that we start building out our keystone deep learning application, one that aims to predict the future price of Bitcoin based on historical public data. By guiding you through a trained neural network, we’ll explore common deep learning network architectures (convolutional, recurrent, generative adversarial) and branch out into deep reinforcement learning before we dive into model optimization and evaluation. We’ll do all of this whilst working on a production-ready web application that combines Tensorflow and Keras to produce a meaningful user-friendly result, leaving you with all the skills you need to tackle and develop your own real-world deep learning projects confidently and effectively. What you will learn Discover how you can assemble and clean your very own datasets Develop a tailored machine learning classification strategy Build, train and enhance your own models to solve unique problems Work with production-ready frameworks like Tensorflow and Keras Explain how neural networks operate in clear and simple terms Understand how to deploy your predictions to the web Who this book is for If you're a Python programmer stepping into the world of data science, this is the ideal way to get started.

Download or read book Practical Data Science with Jupyter written by Prateek Gupta and published by BPB Publications. This book was released on 2021-03-01 with total page 437 pages. Available in PDF, EPUB and Kindle. Book excerpt: Solve business problems with data-driven techniques and easy-to-follow Python examples Ê KEY FEATURESÊÊ _ Essential coverage on statistics and data science techniques. _ Exposure to Jupyter, PyCharm, and use of GitHub. _ Real use-cases, best practices, and smart techniques on the use of data science for data applications. DESCRIPTIONÊÊ This book begins with an introduction to Data Science followed by the Python concepts. The readers will understand how to interact with various database and Statistics concepts with their Python implementations. You will learn how to import various types of data in Python, which is the first step of the data analysis process. Once you become comfortable with data importing, you willÊ clean the dataset and after that will gain an understanding about various visualization charts. This book focuses on how to apply feature engineering techniques to make your data more valuable to an algorithm. The readers will get to know various Machine Learning Algorithms, concepts, Time Series data, and a few real-world case studies. This book also presents some best practices that will help you to be industry-ready. This book focuses on how to practice data science techniques while learning their concepts using Python and Jupyter. This book is a complete answer to the most common question that how can you get started with Data Science instead of explaining Mathematics and Statistics behind the Machine Learning Algorithms. WHAT YOU WILL LEARN _ Rapid understanding of Python concepts for data science applications. _ Understand and practice how to run data analysis with data science techniques and algorithms. _ Learn feature engineering, dealing with different datasets, and most trending machine learning algorithms. _ Become self-sufficient to perform data science tasks with the best tools and techniques. Ê WHO THIS BOOK IS FORÊÊ This book is for a beginner or an experienced professional who is thinking about a career or a career switch to Data Science. Each chapter contains easy-to-follow Python examples. Ê TABLE OF CONTENTS 1. Data Science Fundamentals 2. Installing Software and System Setup 3. Lists and Dictionaries 4. Package, Function, and Loop 5. NumPy Foundation 6. Pandas and DataFrame 7. Interacting with Databases 8. Thinking Statistically in Data Science 9. How to Import Data in Python? 10. Cleaning of Imported Data 11. Data Visualization 12. Data Pre-processing 13. Supervised Machine Learning 14. Unsupervised Machine Learning 15. Handling Time-Series Data 16. Time-Series Methods 17. Case Study-1 18. Case Study-2 19. Case Study-3 20. Case Study-4 21. Python Virtual Environment 22. Introduction to An Advanced Algorithm - CatBoost 23. Revision of All ChaptersÕ Learning

Download or read book Machine Learning in Cancer Research With Applications in Colon Cancer and Big Data Analysis written by Lu, Zhongyu and published by IGI Global. This book was released on 2021-05-28 with total page 263 pages. Available in PDF, EPUB and Kindle. Book excerpt: Cancer continues to be a growing problem as it is the foremost cause of death worldwide, killing millions of people each year. The number of people battling cancer continues to increase, owing to different reasons, such as lifestyle choices. Clinically, determining the cause of cancer is very challenging and often inaccurate. Incorporating efficient and accurate algorithms to detect cancer cases is becoming increasingly beneficial for scientists in computer science and healthcare, as well as a long-term benefit for doctors, patients, clinic practitioners, and more. Specifically, an automation of computation in machine learning could be a solution in the next generation of big data science technology. Machine Learning in Cancer Research With Applications in Colon Cancer and Big Data Analysis presents algorithms that have been developed to evaluate big data approaches and cancer research. The chapters include artificial intelligence and machine learning approaches, as well as case studies to solve the predictive issues in colon cancer research. This book includes concepts and techniques used to run tasks in an automated manner with the intent to improve better accuracy in comparison with previous studies and methods. This book also covers the processes of research design, development, and outcome analytics in this field. Doctors, IT consultants, IT specialists, medical software professionals, data scientists, researchers, computer scientists, healthcare practitioners, academicians, and students can benefit from this critical resource.

Download or read book Applied Data Science with Python and Jupyter written by Alex Galea and published by . This book was released on 2018-10-31 with total page 192 pages. Available in PDF, EPUB and Kindle. Book excerpt: Become the master player of data exploration by creating reproducible data processing pipelines, visualizations, and prediction models for your applications. Key Features Get up and running with the Jupyter ecosystem and some example datasets Learn about key machine learning concepts such as SVM, KNN classifiers, and Random Forests Discover how you can use web scraping to gather and parse your own bespoke datasets Book Description Getting started with data science doesn't have to be an uphill battle. Applied Data Science with Python and Jupyter is a step-by-step guide ideal for beginners who know a little Python and are looking for a quick, fast-paced introduction to these concepts. In this book, you'll learn every aspect of the standard data workflow process, including collecting, cleaning, investigating, visualizing, and modeling data. You'll start with the basics of Jupyter, which will be the backbone of the book. After familiarizing ourselves with its standard features, you'll look at an example of it in practice with our first analysis. In the next lesson, you dive right into predictive analytics, where multiple classification algorithms are implemented. Finally, the book ends by looking at data collection techniques. You'll see how web data can be acquired with scraping techniques and via APIs, and then briefly explore interactive visualizations. What you will learn Get up and running with the Jupyter ecosystem Identify potential areas of investigation and perform exploratory data analysis Plan a machine learning classification strategy and train classification models Use validation curves and dimensionality reduction to tune and enhance your models Scrape tabular data from web pages and transform it into Pandas DataFrames Create interactive, web-friendly visualizations to clearly communicate your findings Who this book is for Applied Data Science with Python and Jupyter is ideal for professionals with a variety of job descriptions across a large range of industries, given the rising popularity and accessibility of data science. You'll need some prior experience with Python, with any prior work with libraries such as Pandas, Matplotlib, and Pandas providing you a useful head start.

Download or read book Advanced Machine Learning Approaches in Cancer Prognosis written by Janmenjoy Nayak and published by Springer Nature. This book was released on 2021-05-29 with total page 461 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book introduces a variety of advanced machine learning approaches covering the areas of neural networks, fuzzy logic, and hybrid intelligent systems for the determination and diagnosis of cancer. Moreover, the tactical solutions of machine learning have proved its vast range of significance and, provided novel solutions in the medical field for the diagnosis of disease. This book also explores the distinct deep learning approaches that are capable of yielding more accurate outcomes for the diagnosis of cancer. In addition to providing an overview of the emerging machine and deep learning approaches, it also enlightens an insight on how to evaluate the efficiency and appropriateness of such techniques and analysis of cancer data used in the cancer diagnosis. Therefore, this book focuses on the recent advancements in the machine learning and deep learning approaches used in the diagnosis of different types of cancer along with their research challenges and future directions for the targeted audience including scientists, experts, Ph.D. students, postdocs, and anyone interested in the subjects discussed.

Download or read book Python for Probability Statistics and Machine Learning written by José Unpingco and published by Springer. This book was released on 2019-06-29 with total page 384 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book, fully updated for Python version 3.6+, covers the key ideas that link probability, statistics, and machine learning illustrated using Python modules in these areas. All the figures and numerical results are reproducible using the Python codes provided. The author develops key intuitions in machine learning by working meaningful examples using multiple analytical methods and Python codes, thereby connecting theoretical concepts to concrete implementations. Detailed proofs for certain important results are also provided. Modern Python modules like Pandas, Sympy, Scikit-learn, Tensorflow, and Keras are applied to simulate and visualize important machine learning concepts like the bias/variance trade-off, cross-validation, and regularization. Many abstract mathematical ideas, such as convergence in probability theory, are developed and illustrated with numerical examples. This updated edition now includes the Fisher Exact Test and the Mann-Whitney-Wilcoxon Test. A new section on survival analysis has been included as well as substantial development of Generalized Linear Models. The new deep learning section for image processing includes an in-depth discussion of gradient descent methods that underpin all deep learning algorithms. As with the prior edition, there are new and updated *Programming Tips* that the illustrate effective Python modules and methods for scientific programming and machine learning. There are 445 run-able code blocks with corresponding outputs that have been tested for accuracy. Over 158 graphical visualizations (almost all generated using Python) illustrate the concepts that are developed both in code and in mathematics. We also discuss and use key Python modules such as Numpy, Scikit-learn, Sympy, Scipy, Lifelines, CvxPy, Theano, Matplotlib, Pandas, Tensorflow, Statsmodels, and Keras. This book is suitable for anyone with an undergraduate-level exposure to probability, statistics, or machine learning and with rudimentary knowledge of Python programming.

Download or read book Advanced Deep Learning with Python written by Ivan Vasilev and published by . This book was released on 2019-12-12 with total page 468 pages. Available in PDF, EPUB and Kindle. Book excerpt: Gain expertise in advanced deep learning domains such as neural networks, meta-learning, graph neural networks, and memory augmented neural networks using the Python ecosystem Key Features Get to grips with building faster and more robust deep learning architectures Investigate and train convolutional neural network (CNN) models with GPU-accelerated libraries such as TensorFlow and PyTorch Apply deep neural networks (DNNs) to computer vision problems, NLP, and GANs Book Description In order to build robust deep learning systems, you'll need to understand everything from how neural networks work to training CNN models. In this book, you'll discover newly developed deep learning models, methodologies used in the domain, and their implementation based on areas of application. You'll start by understanding the building blocks and the math behind neural networks, and then move on to CNNs and their advanced applications in computer vision. You'll also learn to apply the most popular CNN architectures in object detection and image segmentation. Further on, you'll focus on variational autoencoders and GANs. You'll then use neural networks to extract sophisticated vector representations of words, before going on to cover various types of recurrent networks, such as LSTM and GRU. You'll even explore the attention mechanism to process sequential data without the help of recurrent neural networks (RNNs). Later, you'll use graph neural networks for processing structured data, along with covering meta-learning, which allows you to train neural networks with fewer training samples. Finally, you'll understand how to apply deep learning to autonomous vehicles. By the end of this book, you'll have mastered key deep learning concepts and the different applications of deep learning models in the real world. What you will learn Cover advanced and state-of-the-art neural network architectures Understand the theory and math behind neural networks Train DNNs and apply them to modern deep learning problems Use CNNs for object detection and image segmentation Implement generative adversarial networks (GANs) and variational autoencoders to generate new images Solve natural language processing (NLP) tasks, such as machine translation, using sequence-to-sequence models Understand DL techniques, such as meta-learning and graph neural networks Who this book is for This book is for data scientists, deep learning engineers and researchers, and AI developers who want to further their knowledge of deep learning and build innovative and unique deep learning projects. Anyone looking to get to grips with advanced use cases and methodologies adopted in the deep learning domain using real-world examples will also find this book useful. Basic understanding of deep learning concepts and working knowledge of the Python programming language is assumed.

Download or read book Computational Intelligence in Cancer Diagnosis written by Janmenjoy Nayak and published by Academic Press. This book was released on 2023-04-12 with total page 422 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computational Intelligence in Cancer Diagnosis: Progress and Challenges provides insights into the current strength and weaknesses of different applications and research findings on computational intelligence in cancer research. The book improves the exchange of ideas and coherence among various computational intelligence methods and enhances the relevance and exploitation of application areas for both experienced and novice end-users. Topics discussed include neural networks, fuzzy logic, connectionist systems, genetic algorithms, evolutionary computation, cellular automata, self-organizing systems, soft computing, fuzzy systems, and hybrid intelligent systems. The book's chapters are written by international experts from both cancer research, oncology and computational sides to cover different aspects and make it comprehensible for readers with no background on informatics. - Contains updated information about advanced computational intelligence, spanning the areas of neural networks, fuzzy logic, connectionist systems, genetic algorithms, evolutionary computation, cellular automata, self-organizing systems, soft computing, fuzzy systems, and hybrid intelligent systems in diagnosing cancer diseases - Discusses several cancer types, including their detection, treatment and prevention - Presents case studies that illustrate the applications of intelligent computing in data analysis to help readers to analyze and advance their research in cancer