Download or read book Statistical Analysis of fMRI Data second edition written by F. Gregory Ashby and published by MIT Press. This book was released on 2019-09-17 with total page 569 pages. Available in PDF, EPUB and Kindle. Book excerpt: A guide to all aspects of experimental design and data analysis for fMRI experiments, completely revised and updated for the second edition. Functional magnetic resonance imaging (fMRI), which allows researchers to observe neural activity in the human brain noninvasively, has revolutionized the scientific study of the mind. An fMRI experiment produces massive amounts of highly complex data for researchers to analyze. This book describes all aspects of experimental design and data analysis for fMRI experiments, covering every step—from preprocessing to advanced methods for assessing functional connectivity—as well as the most popular multivariate approaches. The goal is not to describe which buttons to push in the popular software packages but to help researchers understand the basic underlying logic, the assumptions, the strengths and weaknesses, and the appropriateness of each method. The field of fMRI research has advanced dramatically in recent years, in both methodology and technology, and this second edition has been completely revised and updated. Six new chapters cover experimental design, functional connectivity analysis through the methods of psychophysiological interactions and beta-series regression, decoding using multi-voxel pattern analysis, dynamic causal modeling, and representational similarity analysis. Other chapters offer new material on recently discovered problems related to head movements, the multivariate GLM, meta-analysis, and other topics. All complex derivations now appear at the end of the relevant chapter to improve readability. A new appendix describes how to build a design matrix with effect coding for group analysis. As in the first edition, MATLAB code is provided with which readers can implement many of the methods described.

Download or read book Statistical Analysis of fMRI Data second edition written by F. Gregory Ashby and published by MIT Press. This book was released on 2019-09-17 with total page 569 pages. Available in PDF, EPUB and Kindle. Book excerpt: A guide to all aspects of experimental design and data analysis for fMRI experiments, completely revised and updated for the second edition. Functional magnetic resonance imaging (fMRI), which allows researchers to observe neural activity in the human brain noninvasively, has revolutionized the scientific study of the mind. An fMRI experiment produces massive amounts of highly complex data for researchers to analyze. This book describes all aspects of experimental design and data analysis for fMRI experiments, covering every step—from preprocessing to advanced methods for assessing functional connectivity—as well as the most popular multivariate approaches. The goal is not to describe which buttons to push in the popular software packages but to help researchers understand the basic underlying logic, the assumptions, the strengths and weaknesses, and the appropriateness of each method. The field of fMRI research has advanced dramatically in recent years, in both methodology and technology, and this second edition has been completely revised and updated. Six new chapters cover experimental design, functional connectivity analysis through the methods of psychophysiological interactions and beta-series regression, decoding using multi-voxel pattern analysis, dynamic causal modeling, and representational similarity analysis. Other chapters offer new material on recently discovered problems related to head movements, the multivariate GLM, meta-analysis, and other topics. All complex derivations now appear at the end of the relevant chapter to improve readability. A new appendix describes how to build a design matrix with effect coding for group analysis. As in the first edition, MATLAB code is provided with which readers can implement many of the methods described.

Download or read book The Statistical Analysis of Functional MRI Data written by Nicole Lazar and published by Springer Science & Business Media. This book was released on 2008-06-10 with total page 302 pages. Available in PDF, EPUB and Kindle. Book excerpt: The study of brain function is one of the most fascinating pursuits of m- ern science. Functional neuroimaging is an important component of much of the current research in cognitive, clinical, and social psychology. The exci- ment of studying the brain is recognized in both the popular press and the scienti?c community. In the pages of mainstream publications, including The New York Times and Wired, readers can learn about cutting-edge research into topics such as understanding how customers react to products and - vertisements (“If your brain has a ‘buy button,’ what pushes it?”, The New York Times,October19,2004),howviewersrespondtocampaignads(“Using M. R. I. ’s to see politics on the brain,” The New York Times, April 20, 2004; “This is your brain on Hillary: Political neuroscience hits new low,” Wired, November 12,2007),howmen and womenreactto sexualstimulation (“Brain scans arouse researchers,”Wired, April 19, 2004), distinguishing lies from the truth (“Duped,” The New Yorker, July 2, 2007; “Woman convicted of child abuse hopes fMRI can prove her innocence,” Wired, November 5, 2007), and even what separates “cool” people from “nerds” (“If you secretly like Michael Bolton, we’ll know,” Wired, October 2004). Reports on pathologies such as autism, in which neuroimaging plays a large role, are also common (for - stance, a Time magazine cover story from May 6, 2002, entitled “Inside the world of autism”).

Download or read book Statistical Analysis of FMRI Data written by Yongmei Chen and published by . This book was released on 2002 with total page 190 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Handbook of Neuroimaging Data Analysis written by Hernando Ombao and published by CRC Press. This book was released on 2016-11-18 with total page 702 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book explores various state-of-the-art aspects behind the statistical analysis of neuroimaging data. It examines the development of novel statistical approaches to model brain data. Designed for researchers in statistics, biostatistics, computer science, cognitive science, computer engineering, biomedical engineering, applied mathematics, physics, and radiology, the book can also be used as a textbook for graduate-level courses in statistics and biostatistics or as a self-study reference for Ph.D. students in statistics, biostatistics, psychology, neuroscience, and computer science.

Download or read book Web based Tutorial for Statistical Analysis of Functional Magnetic Resonance Imaging Data written by Ian Lai and published by . This book was released on 2003 with total page 63 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Handbook of Functional MRI Data Analysis written by Russell A. Poldrack and published by Cambridge University Press. This book was released on 2024-02-08 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Functional magnetic resonance imaging (fMRI) has become the most popular method for imaging brain function. Handbook for Functional MRI Data Analysis provides a comprehensive and practical introduction to the methods used for fMRI data analysis. Using minimal jargon, this book explains the concepts behind processing fMRI data, focusing on the techniques that are most commonly used in the field. This book provides background about the methods employed by common data analysis packages including FSL, SPM, and AFNI. Some of the newest cutting-edge techniques, including pattern classification analysis, connectivity modeling, and resting state network analysis, are also discussed. Readers of this book, whether newcomers to the field or experienced researchers, will obtain a deep and effective knowledge of how to employ fMRI analysis to ask scientific questions and become more sophisticated users of fMRI analysis software.

Download or read book Handbook of Functional MRI Data Analysis written by Russell A. Poldrack and published by Cambridge University Press. This book was released on 2011-08-22 with total page 239 pages. Available in PDF, EPUB and Kindle. Book excerpt: Functional magnetic resonance imaging (fMRI) has become the most popular method for imaging brain function. Handbook of Functional MRI Data Analysis provides a comprehensive and practical introduction to the methods used for fMRI data analysis. Using minimal jargon, this book explains the concepts behind processing fMRI data, focusing on the techniques that are most commonly used in the field. This book provides background about the methods employed by common data analysis packages including FSL, SPM and AFNI. Some of the newest cutting-edge techniques, including pattern classification analysis, connectivity modeling and resting state network analysis, are also discussed. Readers of this book, whether newcomers to the field or experienced researchers, will obtain a deep and effective knowledge of how to employ fMRI analysis to ask scientific questions and become more sophisticated users of fMRI analysis software.

Download or read book Template Free Methods for the Statistical Analysis of FMRI Data written by William Frederick Auffermann and published by . This book was released on 2002 with total page 258 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Introduction to Functional Magnetic Resonance Imaging written by Richard B. Buxton and published by Cambridge University Press. This book was released on 2009-08-27 with total page 479 pages. Available in PDF, EPUB and Kindle. Book excerpt: Functional Magnetic Resonance Imaging (fMRI) has become a standard tool for mapping the working brain's activation patterns, both in health and in disease. It is an interdisciplinary field and crosses the borders of neuroscience, psychology, psychiatry, radiology, mathematics, physics and engineering. Developments in techniques, procedures and our understanding of this field are expanding rapidly. In this second edition of Introduction to Functional Magnetic Resonance Imaging, Richard Buxton – a leading authority on fMRI – provides an invaluable guide to how fMRI works, from introducing the basic ideas and principles to the underlying physics and physiology. He covers the relationship between fMRI and other imaging techniques and includes a guide to the statistical analysis of fMRI data. This book will be useful both to the experienced radiographer, and the clinician or researcher with no previous knowledge of the technology.

Download or read book Statistical Parametric Mapping The Analysis of Functional Brain Images written by William D. Penny and published by Elsevier. This book was released on 2011-04-28 with total page 689 pages. Available in PDF, EPUB and Kindle. Book excerpt: In an age where the amount of data collected from brain imaging is increasing constantly, it is of critical importance to analyse those data within an accepted framework to ensure proper integration and comparison of the information collected. This book describes the ideas and procedures that underlie the analysis of signals produced by the brain. The aim is to understand how the brain works, in terms of its functional architecture and dynamics. This book provides the background and methodology for the analysis of all types of brain imaging data, from functional magnetic resonance imaging to magnetoencephalography. Critically, Statistical Parametric Mapping provides a widely accepted conceptual framework which allows treatment of all these different modalities. This rests on an understanding of the brain's functional anatomy and the way that measured signals are caused experimentally. The book takes the reader from the basic concepts underlying the analysis of neuroimaging data to cutting edge approaches that would be difficult to find in any other source. Critically, the material is presented in an incremental way so that the reader can understand the precedents for each new development. This book will be particularly useful to neuroscientists engaged in any form of brain mapping; who have to contend with the real-world problems of data analysis and understanding the techniques they are using. It is primarily a scientific treatment and a didactic introduction to the analysis of brain imaging data. It can be used as both a textbook for students and scientists starting to use the techniques, as well as a reference for practicing neuroscientists. The book also serves as a companion to the software packages that have been developed for brain imaging data analysis. - An essential reference and companion for users of the SPM software - Provides a complete description of the concepts and procedures entailed by the analysis of brain images - Offers full didactic treatment of the basic mathematics behind the analysis of brain imaging data - Stands as a compendium of all the advances in neuroimaging data analysis over the past decade - Adopts an easy to understand and incremental approach that takes the reader from basic statistics to state of the art approaches such as Variational Bayes - Structured treatment of data analysis issues that links different modalities and models - Includes a series of appendices and tutorial-style chapters that makes even the most sophisticated approaches accessible

Download or read book Analyzing Neural Time Series Data written by Mike X Cohen and published by MIT Press. This book was released on 2014-01-17 with total page 615 pages. Available in PDF, EPUB and Kindle. Book excerpt: A comprehensive guide to the conceptual, mathematical, and implementational aspects of analyzing electrical brain signals, including data from MEG, EEG, and LFP recordings. This book offers a comprehensive guide to the theory and practice of analyzing electrical brain signals. It explains the conceptual, mathematical, and implementational (via Matlab programming) aspects of time-, time-frequency- and synchronization-based analyses of magnetoencephalography (MEG), electroencephalography (EEG), and local field potential (LFP) recordings from humans and nonhuman animals. It is the only book on the topic that covers both the theoretical background and the implementation in language that can be understood by readers without extensive formal training in mathematics, including cognitive scientists, neuroscientists, and psychologists. Readers who go through the book chapter by chapter and implement the examples in Matlab will develop an understanding of why and how analyses are performed, how to interpret results, what the methodological issues are, and how to perform single-subject-level and group-level analyses. Researchers who are familiar with using automated programs to perform advanced analyses will learn what happens when they click the “analyze now” button. The book provides sample data and downloadable Matlab code. Each of the 38 chapters covers one analysis topic, and these topics progress from simple to advanced. Most chapters conclude with exercises that further develop the material covered in the chapter. Many of the methods presented (including convolution, the Fourier transform, and Euler's formula) are fundamental and form the groundwork for other advanced data analysis methods. Readers who master the methods in the book will be well prepared to learn other approaches.

Download or read book fMRI written by Peter A. Bandettini and published by MIT Press. This book was released on 2020-02-25 with total page 282 pages. Available in PDF, EPUB and Kindle. Book excerpt: An accessible introduction to the history, fundamental concepts, challenges, and controversies of the fMRI by one of the pioneers in the field. The discovery of functional MRI (fMRI) methodology in 1991 was a breakthrough in neuroscience research. This non-invasive, relatively high-speed, and high sensitivity method of mapping human brain activity enabled observation of subtle localized changes in blood flow associated with brain activity. Thousands of scientists around the world have not only embraced fMRI as a new and powerful method that complemented their ongoing studies but have also gone on to redirect their research around this revolutionary technique. This volume in the MIT Press Essential Knowledge series offers an accessible introduction to the history, fundamental concepts, challenges, and controversies of fMRI, written by one of the pioneers in the field. Peter Bandettini covers the essentials of fMRI, providing insight and perspective from his nearly three decades of research. He describes other brain imaging and assessment methods; the sources of fMRI contrasts; the basic methodology, from hardware to pulse sequences; brain activation experiment design strategies; and data and image processing. A unique, standalone chapter addresses major controversies in the field, outlining twenty-six challenges that have helped shape fMRI research. Finally, Bandettini lays out the four essential pillars of fMRI: technology, methodology, interpretation, and applications. The book can serve as a guide for the curious nonexpert and a reference for both veteran and novice fMRI scientists.

Download or read book Functional Statistics and Related Fields written by Germán Aneiros and published by Springer. This book was released on 2017-04-25 with total page 297 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume collects latest methodological and applied contributions on functional, high-dimensional and other complex data, related statistical models and tools as well as on operator-based statistics. It contains selected and refereed contributions presented at the Fourth International Workshop on Functional and Operatorial Statistics (IWFOS 2017) held in A Coruña, Spain, from 15 to 17 June 2017. The series of IWFOS workshops was initiated by the Working Group on Functional and Operatorial Statistics at the University of Toulouse in 2008. Since then, many of the major advances in functional statistics and related fields have been periodically presented and discussed at the IWFOS workshops.

Download or read book Functional Magnetic Resonance Imaging written by Scott A. Huettel and published by . This book was released on 2004 with total page 492 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book A Client server Software Application for Statistical Analysis of FMRI Data written by Vijay Singh Choudhary and published by . This book was released on 2004 with total page 132 pages. Available in PDF, EPUB and Kindle. Book excerpt: Statistical analysis methods used for interrogating functional magnetic resonance imaging (fMRI) data are complex and continually evolving. There exist a scarcity of educational material for fMRI. Thus, an instructional based software application was developed for teaching the fundamentals of statistical analysis in fMRI. For wider accessibility, the application was designed with a client/server architecture. The Java client has a layered design for flexibility and a nice Graphical User Interface (GUI) for user interaction. The application client can be deployed to multiple platforms in heterogeneous and distributed network. The future possibility of adding real-time data processing capabilities in the server led us to choose CGI/Perl/C as server side technologies. The client and server communicates via a simple protocol through the Apache Web Server. The application provides students with opportunities for hands-on exploration of the key concepts using phantom data as well as sample human fMRI data. The simulation allows students to control relevant parameters and observe intermediate results for each step in the analysis stream (spatial smoothing, motion correction, statistical model parameter selection etc.). Eventually this software tool and the accompanying tutorial will be disseminated to researchers across the globe via Biomedical Informatics Research Network (BIRN) portal.

Download or read book Medical Image Processing Reconstruction and Analysis written by Jiri Jan and published by CRC Press. This book was released on 2019-08-30 with total page 619 pages. Available in PDF, EPUB and Kindle. Book excerpt: Differently oriented specialists and students involved in image processing and analysis need to have a firm grasp of concepts and methods used in this now widely utilized area. This book aims at being a single-source reference providing such foundations in the form of theoretical yet clear and easy to follow explanations of underlying generic concepts. Medical Image Processing, Reconstruction and Analysis – Concepts and Methods explains the general principles and methods of image processing and analysis, focusing namely on applications used in medical imaging. The content of this book is divided into three parts: Part I – Images as Multidimensional Signals provides the introduction to basic image processing theory, explaining it for both analogue and digital image representations. Part II – Imaging Systems as Data Sources offers a non-traditional view on imaging modalities, explaining their principles influencing properties of the obtained images that are to be subsequently processed by methods described in this book. Newly, principles of novel modalities, as spectral CT, functional MRI, ultrafast planar-wave ultrasonography and optical coherence tomography are included. Part III – Image Processing and Analysis focuses on tomographic image reconstruction, image fusion and methods of image enhancement and restoration; further it explains concepts of low-level image analysis as texture analysis, image segmentation and morphological transforms. A new chapter deals with selected areas of higher-level analysis, as principal and independent component analysis and particularly the novel analytic approach based on deep learning. Briefly, also the medical image-processing environment is treated, including processes for image archiving and communication. Features Presents a theoretically exact yet understandable explanation of image processing and analysis concepts and methods Offers practical interpretations of all theoretical conclusions, as derived in the consistent explanation Provides a concise treatment of a wide variety of medical imaging modalities including novel ones, with respect to properties of provided image data