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Book Feeding Ecology and Growth of Juvenile Chinook Salmon  Oncorhynchus Tshawytscha  During Early Marine Residence

Download or read book Feeding Ecology and Growth of Juvenile Chinook Salmon Oncorhynchus Tshawytscha During Early Marine Residence written by Marisa Norma Chantal Litz and published by . This book was released on 2017 with total page 203 pages. Available in PDF, EPUB and Kindle. Book excerpt: The early marine phase following freshwater emigration has been identified as a critical period in salmonid (Oncorhynchus spp.) life history, characterized by high but variable mortality. Consistent with the “growth-mortality” and “bigger-is-better” hypotheses, at least some of the mortality during the critical period appears to be size-dependent – with smaller or slower growing individuals less likely to survive than larger, faster growing conspecifics. Size and growth are flexible morphological traits that vary with prey availability, yet there is incomplete information on the temporal and spatial match/mismatch between juvenile salmonids and their marine prey in the Northern California Current Ecosystem. This work addressed a gap in the understanding of seasonal variability in prey community composition, abundance, and quality during early marine residence. Three studies were conducted using a population of subyearling (age-0) Chinook salmon (O. tshawytscha) from the upper Columbia River in order to evaluate the effects of prey on salmon growth, biochemistry, and performance. The first was a laboratory study that tested for growth rate and swimming speed differences in salmon reared on three treatment diets followed by three fasting treatments to assess the effects of variability in summer diet quality and winter diet quantity. Significant differences in growth were detected among fasting treatments but not diet treatments. Also, larger salmon with more storage lipids swam faster than smaller leaner fish following fasting, indirectly supporting the notion that growth during the critical period provides a carryover benefit important for overwinter survival. Salmon fatty acids and bulk stable isotopes of carbon and nitrogen were measured throughout the experiment to provide estimates of turnover and incorporation rates. The next study was a longitudinal field study that measured variation in salmon size and prey field community throughout the early ocean period (May – September) over two years of high marine survival (2011 and 2012) to better understand the relationship between prey community composition and salmon growth. Maximum growth rates were associated with high biomass of northern anchovy (Engraulis mordax) which peaked in abundance at different times in each year. The final bioenergetics modeling study combined data from the laboratory and field studies to evaluate the relative importance of prey availability, prey energy density, and temperature on salmon growth. Variation in feeding rate was related most with growth rate variability and least with prey energy density. Throughout their range, subyearlings can grow at high rates in the ocean (>2% body weight per day) by consuming both invertebrate and marine fish prey. However, when marine fish prey are highly abundant they likely provide an energetic advantage over invertebrate prey by reducing overall foraging costs. Quantifying the abundance, size, diet, and distribution of juvenile salmonids relative to their prey field throughout early ocean residence will contribute to a better understanding of seasonal differences in trophic interactions that are associated with differences in annual growth and survival rates. Moreover, an integrated approach that combines sampling of prey with measurements of predator growth, diet, fatty acids, and stable isotopes provides a useful framework for assessing trophic dynamics and evaluating the effects of climate variability and change on predator and prey communities.

Book Fine scale Structure in the Ecology of Juvenile Chinook Salmon at Sea

Download or read book Fine scale Structure in the Ecology of Juvenile Chinook Salmon at Sea written by William Duguid and published by . This book was released on 2020 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Fisheries oceanography often aims to link large scale atmospheric and oceanic processes to variability and trends in the productivity of economically and ecologically valuable fish species. Declines in productivity of multiple species of Pacific Salmon (genus Oncorhynchus) in recent decades have spurred the search for a 'smoking gun;' an explanation that could explain trends in productivity across populations, regions and species. Despite extensive investment of research effort and funding, such an explanation remains elusive. The lack of a unifying explanation for declining productivity of Pacific Salmon may be due to the spatial and temporal complexity of their interactions with the marine environment. This complexity has historically been understudied, in part due to logistical limitations of research on Pacific Salmon at sea. This dissertation reports the results of a detailed study of how juvenile Chinook Salmon O. tshawytscha interact with marine habitats during their first summer and fall at sea. I first developed and validated a novel, hook and line-based method of sampling juvenile Chinook Salmon (microtrolling). I then reviewed and empirically compared methods (insulin like growth factor-1 concentration, RNA to DNA ratio, and scale circulus spacing) for indexing growth rate of juvenile salmon sampled in the ocean, a variable which is hypothesized to be related to subsequent survival. I integrated microtrolling with small vessel oceanography to relate distribution, diet, size and growth of juvenile Chinook Salmon to local scale variation in water column properties (stratification) and zooplankton community composition and abundance for five sites in the Southern Gulf Islands of the Salish Sea during a single summer (2015). While both stratification and zooplankton abundance and composition varied between sites, I failed to find support for the hypothesis that juvenile salmon distribution and growth was positively related to water column stratification at fine spatial scales. Juvenile Chinook Salmon were larger and faster growing where juvenile Pacific Herring Clupea pallasii were important in their diets, suggesting that Pacific Herring may play an important role in structuring the ecology of juvenile Chinook Salmon at sea. I built on 2015 results to conduct a detailed case study of juvenile Chinook Salmon ecology at two sites in the Southern Gulf Islands: Sansum Narrows and Maple Bay. Juvenile Chinook Salmon were consistently larger, more piscivorous, and faster growing at Sansum Narrows than Maple Bay across two years (2015 and 2016) despite lower zooplankton abundance at Sansum Narrows. Hydroacoustic surveys in September 2017 confirmed prior qualitative observations of elevated occurrence of forage fish schools (likely age-0 Pacific Herring) at Sansum Narrows, and a novel, mobile acoustic tag tracking survey suggested that fish tagged at Sansum Narrows may co-locate with juvenile Pacific Herring over the tidal cycle. By relating a scale circulus spacing-based growth index to reconstructed size intervals I found that juvenile Chinook Salmon at Sansum Narrows had been faster growing that those at Maple Bay before the transition to piscivory, and perhaps before migration to the ocean. These results suggest that intrinsic growth potential, or growth conditions during freshwater rearing or the transition to marine residence, interact with fine-scale structure in marine habitats to regulate growth potential of juvenile Chinook Salmon at sea. These factors also likely interact with the basin and interannual scale processes that have received extensive study as regulators of marine survival of juvenile Pacific salmon. These complex interactions should be taken into account when designing or interpreting studies to determine factors limiting productivity of Pacific Salmon populations.

Book Physiological Ecology of Juvenile Chinook Salmon  Oncorhynchus Tshawytscha  Rearing in Fluctuating Salinity Environments

Download or read book Physiological Ecology of Juvenile Chinook Salmon Oncorhynchus Tshawytscha Rearing in Fluctuating Salinity Environments written by Crystal R. Hackmann and published by . This book was released on 2005 with total page 184 pages. Available in PDF, EPUB and Kindle. Book excerpt: Estuaries provide juvenile salmonids with highly productive feeding grounds, refugia from tidal fluctuations and predators, and acclimation areas for smoltification. However, these dynamic, fluctuating salinity environments may also be physiologically stressful to growing juvenile fish. In order to evaluate the costs and benefits of estuarine marshes to juvenile Chinook salmon, I observed habitat use, diet, and growth of fish in the Nehalem Estuary on the Oregon coast. I also examined physiological costs associated with salmon living in fluctuating salinities and growth rates in laboratory experiments. I collected growth, diet and osmoregulation information from juvenile Chinook salmon in three tidal marsh sites in the Nehalem Bay and from juveniles in the Nehalem River. Stomach contents indicated that a high proportion of the diet is derived from terrestrial prey. These allochthonous prey resources likely become available during the flood stages of tidal cycles when drift, emergent and terrestrial insects would become available from the grasses surrounding the water. This field study confirmed that juvenile Chinook salmon utilized fluctuating salinity habitats to feed on a wide range of items including terrestrial-derived resources. Although field studies indicate that fish in estuarine habitats grow well and have access to quality prey resources, experimental manipulations of salinities were used to quantify the physiological costs of residing in the freshwater-saltwater transitional zone. In the laboratory, I designed an experiment to investigate the physiological responses to fluctuating salinities. Experimental treatments consisted of freshwater (FW), saltwater (SW) (22-25%o); and a fluctuating salinity (SW/FW) (2 - 25%o). These treatments were based on typical salinity fluctuations found in estuarine habitats. I measured length, weight, plasma electrolytes and cortisol concentrations for indications of growth and osmoregulatory function. The fluctuating salinity treatment had a negative effect on growth rate and initial osmoregulatory ability when compared with constant freshwater and saltwater treatments. The results indicated that fluctuating salinities had a small but marginally significant reduction in growth rate, possibly due to the additional energetic requirements of switching between hyper- and hypo-osmoregulation. However, 24-hour saltwater challenge results indicated that all fish were capable of osmoregulating in full-strength seawater. In a second experiment, I manipulated feed consumption rates of juvenile spring Chinook salmon to investigate the effects of variable growth rates on osmoregulatory ability and to test the validity of RNA:DNA ratios as indication of recent growth. The treatments consisted of three different feeding rates: three tanks of fish fed 0.7 5% (LOW) body weight; three tanks fed 3% (HIGH) body weight; and three tanks were fasted (NONE) during the experiment. These laboratory results showed a significant difference in the osmoregulatory ability of the NONE treatment compared to the LOW and HIGH treatments which indicates that a reduction in caloric intake significantly effected osmoregulatory capabilities during a 24 hour saltwater challenge. Furthermore, this suggests that there is a minimum energetic requirement in order to maintain proper ion- and osmoregulation in marine conditions. Estuarine marshes have the potential to provide productive feeding grounds with sufficient prey input from terrestrial systems. However, utilization of these marshes in sub-optimal conditions could alter behavior or impair physiological condition of juvenile Chinook salmon prior to their seaward migration by providing insufficient prey resources in a potentially stressful, fluctuating environment. Therefore, the physiological costs associated with estuarine habitat use should be well understood in order to aid future restoration planning.

Book The Food Habits  Growth and Emigration of Juvenile Chinook Salmon  Oncorhynchus Tshawytscha  from a Stream pond Environment

Download or read book The Food Habits Growth and Emigration of Juvenile Chinook Salmon Oncorhynchus Tshawytscha from a Stream pond Environment written by Jon Joseph Lauer and published by . This book was released on 1969 with total page 148 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book Growth of Juvenile Chinook Salmon  Oncorhynchus Tshawytscha  as an Indicator of Density dependence in the Chena River

Download or read book Growth of Juvenile Chinook Salmon Oncorhynchus Tshawytscha as an Indicator of Density dependence in the Chena River written by Megan Tyler Perry and published by . This book was released on 2012 with total page 152 pages. Available in PDF, EPUB and Kindle. Book excerpt: In management of Pacific salmon, it is often assumed that density-dependent factors, mediated by the physical environment during freshwater residency, regulate population size prior to smolting and outmigration. However, in years following low escapement, temperature may be setting the upper limit on growth of juvenile chinook salmon Oncorhynchus tshawytscha during the summer rearing period. Given the importance of juvenile salmon survival for the eventual adult population size, we require a greater understanding of how density-dependent and independent factors affect juvenile demography through time. In this study we tested the hypotheses that (1) juvenile chinook salmon in the Chena River are food limited, and (2) that freshwater growth of juvenile chinook salmon is positively related with marine survival. We tested the first hypotheses using an in-situ supplemental feeding experiment, and the second hypothesis by conducting a retrospective analysis on juvenile growth estimated using a bioenergetics model related to return per spawner estimates from a stock-recruit analysis. We did not find evidence of food limitation, nor evidence that marine survival is correlated with freshwater growth. However, we did find some evidence suggesting that growth during the freshwater rearing period may be limited by food availability following years when adult escapement is high.

Book Size selective Mortality and Environmental Factors Affecting Early Marine Growth During Early Marine Life Stages of Sub yearling Chinook Salmon in Puget Sound  Washington

Download or read book Size selective Mortality and Environmental Factors Affecting Early Marine Growth During Early Marine Life Stages of Sub yearling Chinook Salmon in Puget Sound Washington written by Madilyn Marisa Gamble and published by . This book was released on 2016 with total page 93 pages. Available in PDF, EPUB and Kindle. Book excerpt: Body size, mediated through biotic and abiotic factors affecting growth, is fundamental in determining survival as larger animals are usually less vulnerable to predation, starvation, and extreme environmental conditions (Peterson & Wroblewski 1984; Sogard 1997). Size-selective mortality is a prevalent force regulating marine survival for many anadromous salmonid species, including ESA-listed Chinook salmon (Oncorhynchus tshawytscha) in Puget Sound, WA. The “critical size – critical period” hypothesis suggests that marine survival of anadromous Pacific Salmon (Oncorhynchus spp.) is controlled by two size-selective survival bottlenecks – one during the first marine summer and another during the first marine winter (Beamish and Mahnken 2001). Previous research has indicated a strong positive relationship between the size of juvenile ESA-listed Chinook salmon (O. tshawytscha) in Puget Sound and their survival to adulthood, indicating that early marine growth drives survival (Duffy 2009). Before investigating the drivers of early marine growth, however, it is imperative to understand whether size-selective mortality occurs prior to July in Puget Sound. If so, we may be able to augment marine survival by directing conservation and restoration efforts toward the habitats or regions of Puget Sound where size-selective mortality occurs. Additionally, we must account for any size-selective mortality in estimating early marine growth, as observed weight in July would reflect an artificially inflated “apparent” growth if smaller individuals were experiencing disproportionately high mortality. In this study, we repeatedly sampled nine stocks of both wild and hatchery-origin sub-yearling Chinook salmon during their outmigration into and rearing in Puget Sound. We used scale morphometrics to determine if size-selective mortality is affecting sub-yearling Chinook salmon during their first marine summer rearing in Puget Sound, and if so, where and when that size-selective mortality occurs. We found no evidence of size-selective mortality occurring between habitats or between sampling periods within habitats, suggesting that weight of juvenile Chinook as measured in July is representative of early marine growth and that size-selective mortality occurs later in the summer or outside Puget Sound during the first marine winter. We then focused on understanding differences in growth rates across time, among habitats, and among stocks of juvenile Chinook salmon, and used bioenergetic models to determine the relative influence of prey quality, prey availability, and temperature on early marine growth rates We found that sub-yearling Chinook were larger and grew faster in offshore than in nearshore habitats, and that this difference in growth rate was likely due to differences in prey availability and may have been exacerbated by higher nearshore temperatures. The results of this study can be used to direct restoration and conservation efforts aimed at supporting early marine growth of juvenile Chinook in Puget Sound, and can augment our understanding of distribution patterns and feeding behaviors of Pacific salmon during critical growth periods.

Book Year class Regulation of Mid upper Columbia River Spring Chinook Salmon Oncorhynchus Tshawytscha

Download or read book Year class Regulation of Mid upper Columbia River Spring Chinook Salmon Oncorhynchus Tshawytscha written by Londi M. Tomaro and published by . This book was released on 2011 with total page 194 pages. Available in PDF, EPUB and Kindle. Book excerpt: Early ocean residence is assumed to be a critical period for juvenile Pacific salmon Oncorhynchus spp. However, the specific mechanisms influencing growth and survival in the ocean have not been identified for most populations. Therefore, three hypotheses regarding the relationship between early marine residence and subsequent survival of mid-upper Columbia River spring Chinook salmon were evaluated: the 'bigger is better', 'stage duration', and 'match-mistmatch' hypotheses. Six metrics describing juvenile migration history and condition were developed, including 1) size at freshwater exit; 2) size at ocean capture; 3) initial ocean growth rates; 4) timing of ocean entrance; 5) duration of ocean residence; and 6) marine migration rates. Retrospective estimates of size and growth using otolith analyses rely on the assumption that otolith and somatic size are related. Therefore, I verified this assumption for mid-upper Columbia River Chinook salmon and determined that a body-proportional back-calculation method was the best approach for this population. Fish length and otolith width were positively correlated (r > 0.92) and growth rates estimated from back-calculated sizes were positively correlated with observed growth rates (r = 0.96). I also evaluated the utility of using the otolith Sr:Ca pattern as a marker of hatchery-origin and investigated potential mechanisms for the observed Sr:Ca pattern. Visual and quantitative criteria were developed using otoliths of hatchery fish and were used to correctly classify 85% and 78%, respectively, of a sample of known hatchery-origin fish (n = 114) that were collected in coastal waters. Although Sr:Ca in water and hatchery food did not fully account for the observed pattern in otolith Sr:Ca, the pattern can be used to identify mid-upper Columbia River spring Chinook salmon of hatchery-origin with relatively high accuracy (>75%). The six juvenile metrics were used to evaluate mechanisms potentially regulating establishment of year-class abundance. The only metrics found to be significantly related to future adult abundance were size at freshwater exit (r2 = 0.56) and capture (r2 = 0.60). These data support the 'bigger is better' hypothesis and indicate that factors influencing size and growth during freshwater residence should be investigated further. Juveniles resided in the brackish/ocean for one to two months prior to capture in May and June; therefore, ocean conditions after this period may be related to the 40% of variation in adult abundance unexplained by interannual variation in body size.

Book Feeding Ecology of and Food Consumption by Juvenile Salmon in Coastal Waters  with Implications for Early Ocean Survival

Download or read book Feeding Ecology of and Food Consumption by Juvenile Salmon in Coastal Waters with Implications for Early Ocean Survival written by Richard D. Brodeur and published by . This book was released on 1990 with total page 572 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book Feeding Bionomics of Juvenile Chinook Salmon Relative to Thermal Discharges in the Central Columbia River

Download or read book Feeding Bionomics of Juvenile Chinook Salmon Relative to Thermal Discharges in the Central Columbia River written by and published by . This book was released on 1994 with total page 70 pages. Available in PDF, EPUB and Kindle. Book excerpt: Juvenile chinook salmon (Oncorhynchus tshawytscha) in the Hanford environs of the central Columbia River, Washington consumed almost entirely adult and larval stages of aquatic insects. The food organisms were dominated by midges (Diptera: Tendipedidae); by numbers, adult midges provided 64 and 58% of the diet and larval midges 17 and 18% of the diet, in 1968 and 1969, respectively. The families Hydropsychidae (Trichoptera), Notonectidae (Hemiptera) and Hypogastruridae (Collembola) were of secondary importance. Small fry fed almost exclusively on the small tendipedids. Over 95% of all food organisms originated within the river ecosystem. The distinctive features of food and feeding activity were fourfold: first, relatively few insect groups were utilized; second, the fish depended on drifting, floating, or swimming organisms; third, they visually selected living prey moving in or on the water; and fourth, they were habitat opportunists to a high degree. The 1969 data, were studied to reveal possible thermal effects of heated discharges from plutonium production reactors at Hanford on food and growth parameters. All data were characterized by considerable variation between and within stations. No discernable effects between coldwater and warmwater stations were revealed by analyses of: (1) groups of food organisms utilized, (2) food and feeding activity, (3) numbers of insects consumed, (4) seasonal increases in fish length, (5) fish length-weight relationships, (6) fish coefficients of condition, and (7) stomach biomass. The lack of detectable thermal effects was apparently due to the fact that the main effluent plumes discharge in midstream and the effluents are well mixed before reaching inshore feeding areas. The transient nature of fish groups at each station, influenced by changes in regulated river flows, and the availability of food organisms in the river drift were ecological factors affecting critical thermal evaluation in situ.

Book A Comparison of Early Marine Residence in Hatchery and Natural Chinook Salmon  Oncorhynchus Tshawytscha

Download or read book A Comparison of Early Marine Residence in Hatchery and Natural Chinook Salmon Oncorhynchus Tshawytscha written by Andrew M. Claiborne and published by . This book was released on 2013 with total page 102 pages. Available in PDF, EPUB and Kindle. Book excerpt: The mechanisms of mortality during critical life stages of fish are not well-understood and, for many species, it is not clear if the mechanisms are similar for naturally and artificially propagated individuals. For Chinook salmon (Oncorhynchus tshawytscha), natural fish potentially face negative interactions, such as competition, and survival disadvantages, such as smaller size, that may limit survival when in association with hatchery fish. To better understand the mechanisms of mortality for hatchery and natural Chinook salmon during the critical early marine residence stage, I: (1) developed a model to discriminate between hatchery and natural juveniles using otolith structure; (2) directly compared migratory patterns of hatchery and natural juveniles; and (3) determined if there was evidence for selective mortality during early marine residence. I followed two cohorts through space and time by collecting juveniles from May-September in the Columbia River estuary and off the coast in September of 2010 and 2011. I compared attributes of those juveniles when they firstentered marine waters with those of survivors after their first summer at sea. I used a combination of genetic stock identification, otolith chemistry and structure, and physical tags to determine stock of origin, size at and timing of freshwater emigration, marine growth, and production type (hatchery or natural). I focused on the subyearling life history of a federally managed genetic stock group (upper Columbia River summer and fall Chinook salmon, UCR Su/F) because: 1) it is an abundant stock group; 2) subyearlings may be more vulnerable to size-selective mortality than yearlings; and 3) it is currently impossible to assess impacts of hatchery production due to low rates of marking the hatchery fish within this stock group. The classification model included two metrics, the presence or absence of a previously unreported transfer check associated with hatchery rearing and variability in otolith increment width, and predicted production type with a 92% jack-knifed accuracy. Overall, timing of marine entry was similar for hatchery and natural UCR Su/F juveniles, which entered marine waters from May-September with a peak in July and August in both years. Estuarine residence times were brief: 80% of the individuals captured in the estuary had resided in saline waters for

Book Juvenile Chinook Salmon  Oncorhynchus Tshawytscha  Life History Diversity and Growth Variability in a Large Freshwater Tidal Estuary

Download or read book Juvenile Chinook Salmon Oncorhynchus Tshawytscha Life History Diversity and Growth Variability in a Large Freshwater Tidal Estuary written by Pascale A. L. Goertler and published by . This book was released on 2014 with total page 91 pages. Available in PDF, EPUB and Kindle. Book excerpt: For many fish and wildlife species, a mosaic of available habitats is required to complete their life cycle, and is considered necessary to ensure population stability and persistence. Particularly for young animals, nursery habitats provide opportunities for rapid growth and high survival during this vulnerable life stage. My thesis focuses on juvenile Chinook salmon (Oncorhynchus tshawytscha) and their use of estuarine wetlands as nursery habitat. Estuaries are highly productive systems representing a mosaic of habitats connecting rivers to the sea, and freshwater tidal estuaries provide abundant prey communities, shade, refuge from predation and transitional habitat for the osmoregulatory changes experienced by anadromous fishes. I will be discussing the freshwater tidal wetland habitat use of juvenile Chinook salmon in the Columbia River estuary, which are listed under the Endangered Species Act. I used otolith microstructural growth estimates and prey consumption to measure rearing habitat quality. This sampling effort was designed to target as much genetic diversity as possible, and individual assignment to regional stocks of origin was used to describe the diversity of juvenile Chinook salmon groups inhabiting the estuary. Diversity is important for resilience, and in salmon biocomplexity within fish stocks has been shown to ensure collective productivity despite environmental change. However much of the research which links diversity to resilience in salmon has focused on the adult portion of the life cycle and many resource management policies oversimplify juvenile life history diversity. When this oversimplification of juvenile life history diversity is applied to salmon conservation it may be ignoring critical indicators for stability. Therefore in addition to genetic diversity I also explore methods for better defining juvenile life history diversity and its application in salmon management, such as permitting requirements, habitat restoration, hydropower practices and hatchery management. This study addresses how juvenile salmon growth changes among a range of wetland habitats in the freshwater tidal portion of the Columbia River estuary and how growth variation describes and contributes to life history diversity. To do this, I incorporated otolith microstructure, individual assignment to regional stock of origin, GIS habitat mapping and diet composition, in three habitats (mainstem river, tributary confluence and backwater channel) along ~130 km of the upper estuary. For my first chapter I employed a generalized linear model (GLM) to test three hypotheses: juvenile Chinook growth was best explained by (1) temporal factors, (2) habitat use, or (3) demographic characteristics, such as stock of origin or the timing of seaward migration. I found that variation in growth was best explained by habitat type and an interaction between fork length and month of capture. Juvenile Chinook salmon grew faster in backwater channel habitat and later in the summer. I also found that mid-summer and late summer/fall subyearlings had the highest estuarine growth rates. When compared to other studies in the basin these juvenile Chinook grew on average 0.23, 0.11-0.43 mm/d in the freshwater tidal estuary, similar to estimates in the brackish estuary, but ~4 times slower than those in the plume and upstream reservoirs. However, survival studies from the system elucidated a possible tradeoff between growth and survival in the Columbia River basin. These findings present a unique example of the complexity in understanding the influences of the many processes that generate variation in growth rate for juvenile anadromous fish inhabiting estuaries. In my second chapter, I used otolith microstructure and growth trends produced in a dynamic factor analysis (DFA, a multivariate time series method only recently being used in fisheries) to identify the life history variation in juvenile Chinook salmon caught in the Columbia River estuary over a two-year period (2010-2012). I used genetic assignment to stock of origin and capture location and date with growth trajectories, as a proxy for habitat transitions, to reconstruct life history types. DFA estimated four to five growth trends were present in juvenile Chinook salmon caught in the Columbia River estuary, diversity currently being simplified in many management practices. Regional stocks and habitats did not display divergent growth histories, but the marked hatchery fish did ordinate very similarly in the trend loadings from the DFA analysis, suggesting that hatchery fish may not experience the same breadth of growth variability as wild fish. I was not able to quantify juvenile life history diversity, and juvenile Chinook life history diversity remains difficult to catalog and integrate into species conservation and habitat restoration for resource management. However, by expanding our understanding of how juvenile Chinook salmon experience their freshwater rearing environment we improve our capacity to conserve and manage salmon populations. The findings from my thesis provide the necessary information for a restoration framework to link habitat features with salmon management goals, such as juvenile growth, wild and genetic origin and life history diversity.

Book Ecology of Atlantic Salmon and Brown Trout

Download or read book Ecology of Atlantic Salmon and Brown Trout written by Bror Jonsson and published by Springer Science & Business Media. This book was released on 2011-05-03 with total page 720 pages. Available in PDF, EPUB and Kindle. Book excerpt: Destruction of habitat is the major cause for loss of biodiversity including variation in life history and habitat ecology. Each species and population adapts to its environment, adaptations visible in morphology, ecology, behaviour, physiology and genetics. Here, the authors present the population ecology of Atlantic salmon and brown trout and how it is influenced by the environment in terms of growth, migration, spawning and recruitment. Salmonids appeared as freshwater fish some 50 million years ago. Atlantic salmon and brown trout evolved in the Atlantic basin, Atlantic salmon in North America and Europe, brown trout in Europe, Northern Africa and Western Asia. The species live in small streams as well as large rivers, lakes, estuaries, coastal seas and oceans, with brown trout better adapted to small streams and less well adapted to feeding in the ocean than Atlantic salmon. Smolt and adult sizes and longevity are constrained by habitat conditions of populations spawning in small streams. Feeding, wintering and spawning opportunities influence migratory versus resident lifestyles, while the growth rate influences egg size and number, age at maturity, reproductive success and longevity. Further, early experiences influence later performance. For instance, juvenile behaviour influences adult homing, competition for spawning habitat, partner finding and predator avoidance. The abundance of wild Atlantic salmon populations has declined in recent years; climate change and escaped farmed salmon are major threats. The climate influences through changes in temperature and flow, while escaped farmed salmon do so through ecological competition, interbreeding and the spreading of contagious diseases. The authors pinpoint essential problems and offer suggestions as to how they can be reduced. In this context, population enhancement, habitat restoration and management are also discussed. The text closes with a presentation of what the authors view as major scientific challenges in ecological research on these species.

Book Feeding Ecology and Energy Density of Juvenile Chum Salmon  Oncorhynchus Keta  from Kuskokwim Bay  Western Alaska

Download or read book Feeding Ecology and Energy Density of Juvenile Chum Salmon Oncorhynchus Keta from Kuskokwim Bay Western Alaska written by Sean Eugene Burril and published by . This book was released on 2007 with total page 152 pages. Available in PDF, EPUB and Kindle. Book excerpt: "Juvenile chum salmon from Kuskokwim Bay were sampled for patterns in diet and energy density in 2003 and 2004. Comparisons were made interannually, seasonally, between juvenile size classes, and between sailinity ranges. Sampling was conducted using a modified Kvichak Trawl. Bomb calorimetry was used to obtain energy density values. Feeding success and feeding intensity increased with fish size and season, and was highest in waters with moderate salinity. Feeding success and intensity were lowest for smaller juvenile chum salmon collected early in the season in water with low salinity. Prey composition was similar in both years, but varied with fish size, salinity ranges, and sampling weeks. Calanoid copepods and insects combined made up >50% of all prey items consumed and >80% of the overall prey biomass for all size classes, salinity ranges, and weeks. Feeding by juvenile chum salmon in Kuskokwim Bay appeared to be opportunistic. In 2003, no significant differences in energy density were found. In 2004, energy density decreased significantly from mid-May to mid-June and with increasing fish size. Decreasing energy density with season and size suggests that juvenile chum salmon were allocating the majority of their energy towards growth and smoltification, rather than lipid storage. Results from this study indicate that Kuskokwim bay may provide a suboptimal estuarine rearing habitat for juvenile chum salmon. If seasonally increasing energy demands are not balanced by an increasing food supply, the severe implications potentially include declines in growth rates and possibly overall survival probability of chum salmon juveniles in Kuskokwim Bay"--Leaf iii.

Book Suisun Marsh

    Book Details:
  • Author : Peter B. Moyle
  • Publisher : Univ of California Press
  • Release : 2014-03-26
  • ISBN : 0520276086
  • Pages : 252 pages

Download or read book Suisun Marsh written by Peter B. Moyle and published by Univ of California Press. This book was released on 2014-03-26 with total page 252 pages. Available in PDF, EPUB and Kindle. Book excerpt: One of California's most remarkable wetlands, Suisun Marsh is the largest tidal marsh on the West Coast and a major feature of the San Francisco Estuary. This productive and unique habitat supports endemic species, is a nursery for native fishes, and is a vital link for migratory waterfowl. The 6,000-year-old marsh has been affected by human activity, and humans will continue to have significant impacts on the marsh as the sea level rises and cultural values shift in the century ahead. This study includes in-depth information about the ecological and human history of Suisun Marsh, its abiotic and biotic characteristics, agents of ecological change, and alternative futures facing this ecosystem.