Download or read book Development of Microbial Ecological Theory Stability Plasticity and Evolution of Microbial Ecosystems written by Shin Haruta and published by Frontiers Media SA. This book was released on 2017-06-01 with total page 158 pages. Available in PDF, EPUB and Kindle. Book excerpt: “How can we develop microbial ecological theory?” The development of microbial ecological theory has a long way to reach its goal. Advances in microbial ecological techniques provide novel insights into microbial ecosystems. Articles in this book are challenging to determine the central and general tenets of the ecological theory that describes the features of microbial ecosystems. Their achievements expand the frontiers of current microbial ecology and propose the next step. Assemblage of these diverse articles hopefully helps to go on this long journey with many avenues for advancement of microbial ecology.
Download or read book Biotechnological Applications of Extremophilic Microorganisms written by Natuschka M. Lee and published by Walter de Gruyter GmbH & Co KG. This book was released on 2020-10-26 with total page 424 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides a broad overview how extremophiles can be used in biotechnology, including for the production and degradation of compounds. It reviews various recent discoveries and applications related to a large variety of extremophiles, considering both prokaryotes as well as eukaryotes.
Download or read book Microbial Evolution written by Howard Ochman and published by . This book was released on 2016 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bacteria have been the dominant forms of life on Earth for the past 3.5 billion years. They rapidly evolve, constantly changing their genetic architecture through horizontal DNA transfer and other mechanisms. Consequently, it can be difficult to define individual species and determine how they are related. Written and edited by experts in the field, this collection from Cold Spring Harbor Perspectives in Biology examines how bacteria and other microbes evolve, focusing on insights from genomics-based studies. Contributors discuss the origins of new microbial populations, the evolutionary and ecological mechanisms that keep species separate once they have diverged, and the challenges of constructing phylogenetic trees that accurately reflect their relationships. They describe the organization of microbial genomes, the various mutations that occur, including the birth of new genes de novo and by duplication, and how natural selection acts on those changes. The role of horizontal gene transfer as a strong driver of microbial evolution is emphasized throughout. The authors also explore the geologic evidence for early microbial evolution and describe the use of microbial evolution experiments to examine phenomena like natural selection. This volume will thus be essential reading for all microbial ecologists, population geneticists, and evolutionary biologists.
Download or read book Microbial Ecological Theory written by Lesley A. Ogilvie and published by Caister Academic Press Limited. This book was released on 2012 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: The vast explosion of high-resolution molecular data in the past few years has provided an unprecedented glimpse into the microbial world. This book synthesizes current viewpoints and knowledge on microbial ecological theory. The book has assembled a collection of essays by a diverse group of well-respected scientists who merge the boundaries of ecology and microbiology to explore some of the central tenets of macro-ecological theory with a microbial perspective. The contributors explore the mainstays of macro-ecology asking questions such as "do microbes have biogeography?" and "does a microbial species concept exist?" Additionally, the book shows how high-resolution molecular data is informing and underpinning the evolution of microbial ecological theory. It demonstrates how the application of macro-ecological theory to the microbial world is not only enhancing our understanding of microbial ecology, but it also provides a reference point for the development of new theories. Written for graduate students and academic researchers, the book encourages cross-disciplinary thinking and provides direction and perspective on the still fledgling field of microbial ecological theory. It is highly recommended for all microbiology libraries.
Download or read book Microbial Ecology written by J Vaun McArthur and published by Elsevier. This book was released on 2006-02-01 with total page 429 pages. Available in PDF, EPUB and Kindle. Book excerpt: Based on the thesis that insights into both evolution and ecology can be obtained through the study of microorganismsm, Microbial Ecology examines microbiology through the lens of evolutionary ecology. Measured from a microbial perspective, this text covers such topics as optimal foraging, genome, reduction, novel evolutionary mechanisms, bacterial speciation, and r and K selection. Numerous aspects of microbial existence are also discussed and include: species competition, predation, parasitism, mutualism, microbial communication through quorum sensing and other. The result is a context for understanding microbes in nature and a framework for microbiologists working in industry, medicine, and the environment. - Applies evolutionary ecological concepts to microbes - Addresses individual, population and community ecology - Presents species concepts and offers insights on the origin of life and modern microbial ecology - Examines topics such as species interactions, nutrient cycling, quorum sensing and cheating
Download or read book The Social Biology of Microbial Communities written by Institute of Medicine and published by National Academies Press. This book was released on 2013-01-10 with total page 633 pages. Available in PDF, EPUB and Kindle. Book excerpt: Beginning with the germ theory of disease in the 19th century and extending through most of the 20th century, microbes were believed to live their lives as solitary, unicellular, disease-causing organisms . This perception stemmed from the focus of most investigators on organisms that could be grown in the laboratory as cellular monocultures, often dispersed in liquid, and under ambient conditions of temperature, lighting, and humidity. Most such inquiries were designed to identify microbial pathogens by satisfying Koch's postulates.3 This pathogen-centric approach to the study of microorganisms produced a metaphorical "war" against these microbial invaders waged with antibiotic therapies, while simultaneously obscuring the dynamic relationships that exist among and between host organisms and their associated microorganisms-only a tiny fraction of which act as pathogens. Despite their obvious importance, very little is actually known about the processes and factors that influence the assembly, function, and stability of microbial communities. Gaining this knowledge will require a seismic shift away from the study of individual microbes in isolation to inquiries into the nature of diverse and often complex microbial communities, the forces that shape them, and their relationships with other communities and organisms, including their multicellular hosts. On March 6 and 7, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats hosted a public workshop to explore the emerging science of the "social biology" of microbial communities. Workshop presentations and discussions embraced a wide spectrum of topics, experimental systems, and theoretical perspectives representative of the current, multifaceted exploration of the microbial frontier. Participants discussed ecological, evolutionary, and genetic factors contributing to the assembly, function, and stability of microbial communities; how microbial communities adapt and respond to environmental stimuli; theoretical and experimental approaches to advance this nascent field; and potential applications of knowledge gained from the study of microbial communities for the improvement of human, animal, plant, and ecosystem health and toward a deeper understanding of microbial diversity and evolution. The Social Biology of Microbial Communities: Workshop Summary further explains the happenings of the workshop.
Download or read book Advances in Microbial Ecology written by M. Alexander and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 261 pages. Available in PDF, EPUB and Kindle. Book excerpt: The literature in microbial ecology is growing rapidly. Journals in many countries dealing with microbiology, ecology, environmental sciences, and environmental technology are publishing an ever-increasing number of papers, and these reports are providing microbial ecologists with a wealth of information. This body of data is now so large and the research is published in so many journals and mono graphs that maintaining an overview of the development of the field grows more difficult. The role of Advances in Microbial Ecology thus becomes more obvious with time. The articles in the present volume encompass an array of topics appropriate to the development of the discipline of microbial ecology. Both terrestrial and aquatic ecosystems are subjects of attention, and a variety of microbiological groups come under review. Furthermore, methodological problems and ap proaches are not overlooked. The ecology of protozoa, constraints on their populations, and their role in nutrient cycling and energy flow are considered by J. D. Stout. A unique micro environment is discussed by B. Norkrans, the surface microlayer of aquatic eco systems, and Dr. Norkrans presents information on a field that has blossomed in the last few years. The subject of the review by H. S. Lowendorf is the genus Rhizobium, a group of bacteria whose importance has grown as the cost of fuel for production of nitrogen fertilizers and ultimately for protein production has increased.
Download or read book Advances in Microbial Ecology written by M. Alexander and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 259 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in Microbial Ecology was established by the International Commis sion on Microbial Ecology to provide a vehicle for in-depth, critical, and, it is hoped, provocative reviews on aspects of both applied and basic microbial ecol ogy. In the five years of its existence, Advances has achieved recognition as a major source of information and inspiration both for practicing and f
Download or read book Microbial Evolution under Extreme Conditions written by Corien Bakermans and published by Walter de Gruyter GmbH & Co KG. This book was released on 2015-03-10 with total page 290 pages. Available in PDF, EPUB and Kindle. Book excerpt: Today's microorganisms represent the vast majority of biodiversity on Earth and have survived nearly 4 billion years of evolutionary change. However, we still know little about the processes of evolution as applied to microorganisms and microbial populations. Microbial evolution occurred and continues to take place in a vast variety of environmental conditions that range from anoxic to oxic, from hot to cold, from free-living to symbiotic, etc. Some of these physicochemical conditions are considered "extreme", particularly when inhabitants are limited to microorganisms. It is easy to imagine that microbial life in extreme environments is somehow more constrained and perhaps subjected to different evolutionary pressures. But what do we actually know about microbial evolution under extreme conditions and how can we apply that knowledge to other conditions? Appealingly, extreme environments with their relatively limited numbers of inhabitants can serve as good model systems for the study of evolutionary processes. A look at the microbial inhabitants of today's extreme environments provides a snapshot in time of evolution and adaptation to extreme conditions. These adaptations manifest at different levels from established communities and species to genome content and changes in specific genes that result in altered function or gene expression. But as a recent (2011) report from the American Academy of Microbiology observes: "A complex issue in the study of microbial evolution is unraveling the process of evolution from that of adaptation. In many cases, microbes have the capacity to adapt to various environmental changes by changing gene expression or community composition as opposed to having to evolve entirely new capabilities." We have learned much about how microbes are adapted to extreme conditions but relatively little is known about these adaptations evolved. How did the different processes of evolution such as mutation, immigration, horizontal (lateral) gene transfer, recombination, hybridization, genetic drift, fixation, positive and negative selection, and selective screens contribute to the evolution of these genes, genomes, microbial species, communities, and functions? What are typical rates of these processes? How prevalent are each of these processes under different conditions? This book explores the current state of knowledge about microbial evolution under extreme conditions and addresses the following questions: What is known about the processes of microbial evolution (mechanisms, rates, etc.) under extreme conditions? Can this knowledge be applied to other systems and what is the broader relevance? What remains unknown and requires future research? These questions will be addressed from several perspectives including different extreme environments, specific organisms, and specific evolutionary processes.
Download or read book Topics in Ecological and Environmental Microbiology written by Thomas Mitchell Schmidt and published by Academic Press. This book was released on 2011-09-28 with total page 772 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides an overview of ecological aspects of the metabolism and behavior of microbes, microbial habitats, biogeochemical cycles, and biotechnology. It was designed by selecting relevant chapters from the comprehensive Encyclopedia of Microbiology, 3rd edn., and inviting the original authors to update their material to include key developments and advances in the field.
Download or read book Processes in Microbial Ecology written by David L. Kirchman and published by OUP Oxford. This book was released on 2012-02-02 with total page 597 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microbial ecology is the study of interactions among microbes in natural environments and their roles in biogeochemical cycles, food web dynamics, and the evolution of life. Microbes are the most numerous organisms in the biosphere and mediate many critical reactions in elemental cycles and biogeochemical reactions. Because microbes are essential players in the carbon cycle and related processes, microbial ecology is a vital science for understanding the role of the biosphere in global warming and the response of natural ecosystems to climate change. This novel textbook discusses the major processes carried out by viruses, bacteria, fungi, protozoa and other protists - the microbes - in freshwater, marine, and terrestrial ecosystems. It focuses on biogeochemical processes, starting with primary production and the initial fixation of carbon into cellular biomass, before exploring how that carbon is degraded in both oxygen-rich (oxic) and oxygen-deficient (anoxic) environments. These biogeochemical processes are affected by ecological interactions, including competition for limiting nutrients, viral lysis, and predation by various protists in soils and aquatic habitats. The book neatly connects processes occurring at the micron scale to events happening at the global scale, including the carbon cycle and its connection to climate change issues. A final chapter is devoted to symbiosis and other relationships between microbes and larger organisms. Microbes have huge impacts not only on biogeochemical cycles, but also on the ecology and evolution of more complex forms of life, including Homo sapiens..
Download or read book The New Science of Metagenomics written by National Research Council and published by National Academies Press. This book was released on 2007-06-24 with total page 170 pages. Available in PDF, EPUB and Kindle. Book excerpt: Although we can't usually see them, microbes are essential for every part of human life-indeed all life on Earth. The emerging field of metagenomics offers a new way of exploring the microbial world that will transform modern microbiology and lead to practical applications in medicine, agriculture, alternative energy, environmental remediation, and many others areas. Metagenomics allows researchers to look at the genomes of all of the microbes in an environment at once, providing a "meta" view of the whole microbial community and the complex interactions within it. It's a quantum leap beyond traditional research techniques that rely on studying-one at a time-the few microbes that can be grown in the laboratory. At the request of the National Science Foundation, five Institutes of the National Institutes of Health, and the Department of Energy, the National Research Council organized a committee to address the current state of metagenomics and identify obstacles current researchers are facing in order to determine how to best support the field and encourage its success. The New Science of Metagenomics recommends the establishment of a "Global Metagenomics Initiative" comprising a small number of large-scale metagenomics projects as well as many medium- and small-scale projects to advance the technology and develop the standard practices needed to advance the field. The report also addresses database needs, methodological challenges, and the importance of interdisciplinary collaboration in supporting this new field.
Download or read book Advances in Microbial Ecology written by M. Alexander and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 308 pages. Available in PDF, EPUB and Kindle. Book excerpt: The substantial and impressive changes in microbial ecology can scarcely be chronicled in a meaningful fashion, and a review series such as Advances in Microbial Ecology can thus not do justice to the numerous studies that have been published in recent years. On the other hand, the mere existence of this series bears testimony to the many and diverse activities. The growing concern with microbial communities and processes in natural ecosystems is not restricted to scientists in one region and is not limited to particular groups of organisms or to individual theoretical or applied problems. The recent and successful international symposium on microbial ecology held in New Zealand-sponsored in part by the International Commission on Microbial Ecology, as is the Advances-and the general microbiology and ecology conferences and congresses have included reports from investigators from all corners of the globe and have explored both new and traditional areas, agricultural and public health problems, individual species and complex communities, and heterotrophs and autotrophs as well as ecosystem models relying on mathematical concepts and environmental processes needing sophisticated chemistry for their definition. The reviews in the present volume thus can offer only a minute sampling of the multitude of topics being actively explored at the present time. Two of the reviews focus attention on biogeochemical cycles regulated by microorganisms, in particular the way these organisms contribute to or control the levels and identities of chemical substances in the atmosphere. The chapter by Y. Dommergues, L. W. Belser, and E. L.
Download or read book Adaption of Microbial Life to Environmental Extremes written by Helga Stan-Lotter and published by Springer. This book was released on 2017-03-02 with total page 345 pages. Available in PDF, EPUB and Kindle. Book excerpt: This entirely updated second edition provides an overview on the biology, ecology and biodiversity of extremophiles. Unusual and less explored ecosystems inhabited by extremophiles such as marine hypersaline deeps, extreme cold, desert sands, and man-made clean rooms for spacecraft assembly are presented. An additional focus is put on the role of these highly specialized microorganism in applied research fields, ranging from biotechnology and nanotechnology to astrobiology. Examples such as novel psychrophilic enzymes, compounds from halophiles, and detection strategies for potential extraterrestrial life forms are discussed in detail. The book addresses researchers and advanced students in the fields of microbiology, microbial ecology and biotechnology.
Download or read book Dynamics of Microbial Communities written by Aaron Joseph Goodman and published by . This book was released on 2019 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: This thesis explores the dynamics of microbial communities from ecological, game theoretic and an evolutionary perspective. Chapter 1 discusses the stability of host-associated microbial ecosystems and related mathematical models and the inference of these models. Chapter 2 addresses the question of microbial interactions. Using a game-theoretic model, I explore ways in which agents (such as cross-feeding bacteria) in a multiagent system can coordinate without explicit communication channels. Chapter 3 explores the evolution of hierarchical structures of bacterial metabolic networks.
Download or read book Microbial ecology and ecosystems from a Southern perspective written by Veronica Molina and published by Frontiers Media SA. This book was released on 2023-01-06 with total page 289 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book The causes and consequences of microbial community structure written by Diana Reid Nemergut and published by Frontiers E-books. This book was released on 2015-01-22 with total page 185 pages. Available in PDF, EPUB and Kindle. Book excerpt: The causes and consequences of differences in microbial community structure, defined here as the relative proportions of rare and abundant organisms within a community, are poorly understood. Articles in “The Causes and Consequences of Microbial Community Structure”, use empirical or modeling approaches as well as literature reviews to enrich our mechanistic understanding of the controls over the relationship between community structure and ecosystem processes. Specifically, authors address the role of trait distributions and tradeoffs, species-species interactions, evolutionary dynamics, community assembly processes and physical controls in affecting ‘who’s there’ and ‘what they are doing.’
