Download or read book Computing with Cells and Atoms written by Cris Calude and published by CRC Press. This book was released on 2000-10-26 with total page 324 pages. Available in PDF, EPUB and Kindle. Book excerpt: At the turning of the millennium, a switch in computing technology is forecasted and looked for. Two main directions of research, both based on quite unconventional ideas are most promising - quantum computing and molecular computing. In the last few years, both of these methods have been intensely investigated. The present book is the first "friendly" presentation of basic ideas in these exciting areas. The style is rigorous, but without entering into excessive technicalities. Equal attention is paid to the main practical results reported so far and the main theoretical developments. The book is written for the educated layman and is self-contained, including all the necessary facts from mathematics, computer science, biology and quantum mechanics.
Download or read book Computing with Cells written by Pierluigi Frisco and published by OUP Oxford. This book was released on 2009-05-21 with total page 368 pages. Available in PDF, EPUB and Kindle. Book excerpt: Membrane systems are a new class of distributed and parallel model of computation inspired by the subdivision of living cells into compartments delimited by membranes. Their hierarchical internal structure, their locality of interactions, their inherent parallelism and also their capacity to create new compartments, represent the distinguishing hallmarks of membrane systems. Membrane computing, the study of membrane systems, is a fascinating and fast growing area of research. The main streams of current investigations in Membrane Computing concern theoretical computer science and the modelling of complex systems. In this monograph Pierluigi Frisco considers the former trend: he presents an in-depth study of the formal language and computational complexity aspects of the most widely investigated models of membrane systems. This study gives a comprehensive understanding of the computational power of the models considered, shows different proof techniques used for such study, and introduces links highlighting the similarities and differences between the their computational power. These models cover a broad range of features, giving a grasp of the enormous flexibility of the framework offered by membrane systems. Aimed at graduates and researchers in the field, who can use it as a reference text, and to people with an initial interest in Membrane Computing, who can use it as a clear and up to date starting point for Membrane Computing.
Download or read book Computation in Cells and Tissues written by R. Paton and published by Springer Science & Business Media. This book was released on 2013-03-14 with total page 349 pages. Available in PDF, EPUB and Kindle. Book excerpt: The field of biologically inspired computation has coexisted with mainstream computing since the 1930s, and the pioneers in this area include Warren McCulloch, Walter Pitts, Robert Rosen, Otto Schmitt, Alan Turing, John von Neumann and Norbert Wiener. Ideas arising out of studies of biology have permeated algorithmics, automata theory, artificial intelligence, graphics, information systems and software design. Within this context, the biomolecular, cellular and tissue levels of biological organisation have had a considerable inspirational impact on the development of computational ideas. Such innovations include neural computing, systolic arrays, genetic and immune algorithms, cellular automata, artificial tissues, DNA computing and protein memories. With the rapid growth in biological knowledge there remains a vast source of ideas yet to be tapped. This includes developments associated with biomolecular, genomic, enzymic, metabolic, signalling and developmental systems and the various impacts on distributed, adaptive, hybrid and emergent computation. This multidisciplinary book brings together a collection of chapters by biologists, computer scientists, engineers and mathematicians who were drawn together to examine the ways in which the interdisciplinary displacement of concepts and ideas could develop new insights into emerging computing paradigms. Funded by the UK Engineering and Physical Sciences Research Council (EPSRC), the CytoCom Network formally met on five occasions to examine and discuss common issues in biology and computing that could be exploited to develop emerging models of computation.
Download or read book Wetware written by Dennis Bray and published by Yale University Press. This book was released on 2009-05-26 with total page 280 pages. Available in PDF, EPUB and Kindle. Book excerpt: “A beautifully written journey into the mechanics of the world of the cell, and even beyond, exploring the analogy with computers in a surprising way” (Denis Noble, author of Dance to the Tune of Life). How does a single-cell creature, such as an amoeba, lead such a sophisticated life? How does it hunt living prey, respond to lights, sounds, and smells, and display complex sequences of movements without the benefit of a nervous system? This book offers a startling and original answer. In clear, jargon-free language, Dennis Bray taps the findings from the discipline of systems biology to show that the internal chemistry of living cells is a form of computation. Cells are built out of molecular circuits that perform logical operations, as electronic devices do, but with unique properties. Bray argues that the computational juice of cells provides the basis for all distinctive properties of living systems: it allows organisms to embody in their internal structure an image of the world, and this accounts for their adaptability, responsiveness, and intelligence. In Wetware, Bray offers imaginative, wide-ranging, and perceptive critiques of robotics and complexity theory, as well as many entertaining and telling anecdotes. For the general reader, the practicing scientist, and all others with an interest in the nature of life, this book is an exciting portal to some of biology’s latest discoveries and ideas. “Drawing on the similarities between Pac-Man and an amoeba and efforts to model the human brain, this absorbing read shows that biologists and engineers have a lot to learn from working together.” —Discover magazine “Wetware will get the reader thinking.” —Science magazine
Download or read book Cellular Computing written by Martyn Amos and published by Oxford University Press. This book was released on 2004-08-05 with total page 240 pages. Available in PDF, EPUB and Kindle. Book excerpt: The completion of the first draft of the human genome has led to an explosion of interest in genetics and molecular biology. The view of the genome as a network of interacting computational components is well-established, but researchers are now trying to reverse the analogy, by using living organisms to construct logic circuits. The potential applications for such technologies is huge, ranging from bio-sensors, through industrial applications to drug delivery and diagnostics. This book would be the first to deal with the implementation of this technology, describing several working experimental demonstrations using cells as components of logic circuits, building toward computers incorporating biological components in their functioning.
Download or read book Computing with Cells and Atoms written by Cristian Calude and published by . This book was released on 2000 with total page 309 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book A Computer Scientist s Guide to Cell Biology written by William W. Cohen and published by Springer Science & Business Media. This book was released on 2007-07-23 with total page 104 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is designed specifically as a guide for Computer Scientists needing an introduction to Cell Biology. The text explores three different facets of biology: biological systems, experimental methods, and language and nomenclature. The author discusses what biologists are trying to determine from their experiments, how various experimental procedures are used and how they relate to accepted concepts in computer science, and the vocabulary necessary to read and understand current literature in biology. The book is an invaluable reference tool and an excellent starting point for a more comprehensive examination of cell biology.
Download or read book Ultimate Computing written by S.R. Hameroff and published by Elsevier. This book was released on 2014-04-11 with total page 380 pages. Available in PDF, EPUB and Kindle. Book excerpt: The possibility of direct interfacing between biological and technological information devices could result in a merger of mind and machine - Ultimate Computing. This book, a thorough consideration of this idea, involves a number of disciplines, including biochemistry, cognitive science, computer science, engineering, mathematics, microbiology, molecular biology, pharmacology, philosophy, physics, physiology, and psychology.
Download or read book Computation in Living Cells written by Andrzej Ehrenfeucht and published by Springer. This book was released on 2014-01-15 with total page 220 pages. Available in PDF, EPUB and Kindle. Book excerpt: Natural Computing is concerned with computation that is taking place in Nature. The investigation of computations in living cells is one of the central and fastest growing areas of research in this field. Gene assembly in ciliates (unicellular organisms) is a splendid example of such computations, and it is fascinating from both the biological and the computational viewpoints. As a matter of fact, both biology and the science of computation have benefited from the interdisciplinary research on the computational nature of gene assembly this work has helped to clarify important biological aspects of gene assembly, yielded novel insights into the nature of computation, and broadened our understanding of what computation is about. This monograph gives an accessible account of both the biology and the formal analysis of the gene assembly process. It can be used as a textbook for either graduate courses or seminars.
Download or read book DNA Computing Models written by Zoya Ignatova and published by Springer Science & Business Media. This book was released on 2008-06-11 with total page 288 pages. Available in PDF, EPUB and Kindle. Book excerpt: Sir Francis Crick would undoubtedly be at the front of the line ordering this fascinating book. Being one of the discoverers of DNA, he would be amazed at how his work has been applied to mankind's most important invention, the computer. In this excellent text, the reader is given a comprehensive introduction to the field of DNA computing. The book emphasizes computational methods to tackle central problems of DNA computing, such as controlling living cells, building patterns, and generating nanomachines. It also includes laboratory-scale human-operated models of computation, as well as a description of the first experiment of DNA computation conducted by Adleman in 1994.
Download or read book Computation in Living Cells written by Andrzej Ehrenfeucht and published by Springer Science & Business Media. This book was released on 2013-03-09 with total page 202 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the first monograph on computation in living cells - one of the central and fastest growing areas of research in this field. Gene assembly in ciliates (unicellular organisms) is a splendid example of such computations. This work has helped to clarify important biological aspects of gene assembly, yielded novel insights into the nature of computation, and broadened our understanding of what computation is about. The monograph gives an accessible account of both the biology and the formal analysis of the gene assembly process. It can be used as a textbook for either graduate courses or seminars.
Download or read book Biocomputing written by Panos M. Pardalos and published by Springer Science & Business Media. This book was released on 2013-12-01 with total page 265 pages. Available in PDF, EPUB and Kindle. Book excerpt: In the quest to understand and model the healthy or sick human body, re searchers and medical doctors are utilizing more and more quantitative tools and techniques. This trend is pushing the envelope of a new field we call Biomedical Computing, as an exciting frontier among signal processing, pattern recognition, optimization, nonlinear dynamics, computer science and biology, chemistry and medicine. A conference on Biocomputing was held during February 25-27, 2001 at the University of Florida. The conference was sponsored by the Center for Applied Optimization, the Computational Neuroengineering Center, the Biomedical En gineering Program (through a Whitaker Foundation grant), the Brain Institute, the School of Engineering, and the University of Florida Research & Graduate Programs. The conference provided a forum for researchers to discuss and present new directions in Biocomputing. The well-attended three days event was highlighted by the presence of top researchers in the field who presented their work in Biocomputing. This volume contains a selective collection of ref ereed papers based on talks presented at this conference. You will find seminal contributions in genomics, global optimization, computational neuroscience, FMRI, brain dynamics, epileptic seizure prediction and cancer diagnostics. We would like to take the opportunity to thank the sponsors, the authors of the papers, the anonymous referees, and Kluwer Academic Publishers for making the conference successful and the publication of this volume possible. Panos M. Pardalos and Jose C.
Download or read book Algorithmic Bioprocesses written by Anne Condon and published by Springer Science & Business Media. This book was released on 2009-08-14 with total page 736 pages. Available in PDF, EPUB and Kindle. Book excerpt: A fundamental understanding of algorithmic bioprocesses is key to learning how information processing occurs in nature at the cell level. The field is concerned with the interactions between computer science on the one hand and biology, chemistry, and DNA-oriented nanoscience on the other. In particular, this book offers a comprehensive overview of research into algorithmic self-assembly, RNA folding, the algorithmic foundations for biochemical reactions, and the algorithmic nature of developmental processes. The editors of the book invited 36 chapters, written by the leading researchers in this area, and their contributions include detailed tutorials on the main topics, surveys of the state of the art in research, experimental results, and discussions of specific research goals. The main subjects addressed are sequence discovery, generation, and analysis; nanoconstructions and self-assembly; membrane computing; formal models and analysis; process calculi and automata; biochemical reactions; and other topics from natural computing, including molecular evolution, regulation of gene expression, light-based computing, cellular automata, realistic modelling of biological systems, and evolutionary computing. This subject is inherently interdisciplinary, and this book will be of value to researchers in computer science and biology who study the impact of the exciting mutual interaction between our understanding of bioprocesses and our understanding of computation.
Download or read book Applications of Membrane Computing written by Gabriel Ciobanu and published by Springer Science & Business Media. This book was released on 2007-08-06 with total page 448 pages. Available in PDF, EPUB and Kindle. Book excerpt: Membrane computing is a branch of natural computing which investigates computing models abstracted from the structure and functioning of living cells and from their interactions in tissues or higher-order biological structures. The models considered, called membrane systems (P systems), are parallel, distributed computing models, processing multisets of symbols in cell-like compartmental architectures. In many applications membrane systems have considerable advantages – among these are their inherently discrete nature, parallelism, transparency, scalability and nondeterminism. In dedicated chapters, leading experts explain most of the applications of membrane computing reported so far, in biology, computer science, computer graphics and linguistics. The book also contains detailed reviews of the software tools used to simulate P systems.
Download or read book Practical Computing on the Cell Broadband Engine written by Sandeep Koranne and published by Springer Science & Business Media. This book was released on 2009-07-07 with total page 501 pages. Available in PDF, EPUB and Kindle. Book excerpt: Practical Programming in the Cell Broadband Engine offers a unique programming guide for the Cell Broadband Engine, demonstrating a large number of real-life programs to identify and solve problems in engineering, logic design, VLSI CAD, number-theory, graph-theory, computational geometry, image processing, and other subjects. Key features include: Numerous diagrams, mnemonics, tables, charts, code samples for making program development on the CBE as accessible as possible Comprehensive reading list for introductory material to the subject matter A website providing all source codes and sample-data for examples presented in this text.
Download or read book A Computer Scientist s Guide to Cell Biology written by William W. Cohen and published by Springer. This book was released on 2024-08-22 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Unlike the structured world of computer science, biology is complex, evolving, and often lacks clean abstract models. This book aims to serve as a guide for computer scientists who need to understand cell biology, breaking the field into three parts: biological mechanics, experimental methods, and language/nomenclature. While biological mechanics, which investigates cellular-level details, is covered by many texts, this book also focuses on experimental methods – how biologists conduct experiments and gather data - and on helping the reader understand the language and terminology of biology, which is rich but challenging for non-biologists. A Computer Scientist's Guide to Cell Biology uses a metaphor of biology as a strange land with an unfamiliar language and customs. The goal of the book is to provide a high-level introduction to cell biology, simplifying concepts and relating them to familiar ideas from computer science, so that working computer scientists can more effectively understand read recent research papers and results. This Second Edition contains a number of updates, including discussions of CRISPR, advances in DNA Sequencing, and mRNA vaccines. It serves as an easy-to-read travel guide for computer scientists navigating the intricate and sometimes perplexing terrain of cell biology, offering insights into experimental methods and helping bridge the gap between the structured world of computer science and the complexities of biological systems.
Download or read book DNA Computing Models written by Zoya Ignatova and published by Springer. This book was released on 2008-11-01 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Sir Francis Crick would undoubtedly be at the front of the line ordering this fascinating book. Being one of the discoverers of DNA, he would be amazed at how his work has been applied to mankind's most important invention, the computer. In this excellent text, the reader is given a comprehensive introduction to the field of DNA computing. The book emphasizes computational methods to tackle central problems of DNA computing, such as controlling living cells, building patterns, and generating nanomachines. It also includes laboratory-scale human-operated models of computation, as well as a description of the first experiment of DNA computation conducted by Adleman in 1994.