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Book Compositional Data Analysis in Practice

Download or read book Compositional Data Analysis in Practice written by Michael Greenacre and published by CRC Press. This book was released on 2018-07-17 with total page 117 pages. Available in PDF, EPUB and Kindle. Book excerpt: Compositional data are quantitative descriptions of the parts of some whole, conveying exclusively relative information. Examples are found in various fields, including geology, medicine, chemistry, agriculture, economics, social science, etc. This concise book presents a very applied introduction to compositional data analysis, focussing on the use of R for analysis. It includes lots of real examples, code snippets, and colour figures, to illustrate the methods.

Book Modeling and Analysis of Compositional Data

Download or read book Modeling and Analysis of Compositional Data written by Vera Pawlowsky-Glahn and published by John Wiley & Sons. This book was released on 2015-02-17 with total page 274 pages. Available in PDF, EPUB and Kindle. Book excerpt: Modeling and Analysis of Compositional Data presents a practical and comprehensive introduction to the analysis of compositional data along with numerous examples to illustrate both theory and application of each method. Based upon short courses delivered by the authors, it provides a complete and current compendium of fundamental to advanced methodologies along with exercises at the end of each chapter to improve understanding, as well as data and a solutions manual which is available on an accompanying website. Complementing Pawlowsky-Glahn’s earlier collective text that provides an overview of the state-of-the-art in this field, Modeling and Analysis of Compositional Data fills a gap in the literature for a much-needed manual for teaching, self learning or consulting.

Book Compositional Data Analysis in the Geosciences

Download or read book Compositional Data Analysis in the Geosciences written by Antonella Buccianti and published by Geological Society of London. This book was released on 2006 with total page 232 pages. Available in PDF, EPUB and Kindle. Book excerpt: Since Karl Pearson wrote his paper on spurious correlation in 1897, a lot has been said about the statistical analysis of compositional data, mainly by geologists such as Felix Chayes. The solution appeared in the 1980s, when John Aitchison proposed to use Iogratios. Since then, the approach has seen a great expansion, mainly building on the idea of the `natural geometry' of the sample space. Statistics is expected to give sense to our perception of the natural scale of the data, and this is made possible for compositional data using Iogratios. This publication will be a milestone in this process.

Book Compositional Data Analysis

Download or read book Compositional Data Analysis written by Vera Pawlowsky-Glahn and published by John Wiley & Sons. This book was released on 2011-09-19 with total page 405 pages. Available in PDF, EPUB and Kindle. Book excerpt: It is difficult to imagine that the statistical analysis of compositional data has been a major issue of concern for more than 100 years. It is even more difficult to realize that so many statisticians and users of statistics are unaware of the particular problems affecting compositional data, as well as their solutions. The issue of ``spurious correlation'', as the situation was phrased by Karl Pearson back in 1897, affects all data that measures parts of some whole, such as percentages, proportions, ppm and ppb. Such measurements are present in all fields of science, ranging from geology, biology, environmental sciences, forensic sciences, medicine and hydrology. This book presents the history and development of compositional data analysis along with Aitchison's log-ratio approach. Compositional Data Analysis describes the state of the art both in theoretical fields as well as applications in the different fields of science. Key Features: Reflects the state-of-the-art in compositional data analysis. Gives an overview of the historical development of compositional data analysis, as well as basic concepts and procedures. Looks at advances in algebra and calculus on the simplex. Presents applications in different fields of science, including, genomics, ecology, biology, geochemistry, planetology, chemistry and economics. Explores connections to correspondence analysis and the Dirichlet distribution. Presents a summary of three available software packages for compositional data analysis. Supported by an accompanying website featuring R code. Applied scientists working on compositional data analysis in any field of science, both in academia and professionals will benefit from this book, along with graduate students in any field of science working with compositional data.

Book Geostatistical Analysis of Compositional Data

Download or read book Geostatistical Analysis of Compositional Data written by Vera Pawlowsky-Glahn and published by Oxford University Press. This book was released on 2004-06-03 with total page 204 pages. Available in PDF, EPUB and Kindle. Book excerpt: 1. Introduction. 2. Regionalized Compositions. 3. Spatial Covariance Structure. 4. Concepts of Null Correlation. 5. Cokriging. 6. Practical Aspects of Compositional Data Analysis. 7. Application to Real Data. Summary and Prospects. References. Index

Book Advances in Compositional Data Analysis

Download or read book Advances in Compositional Data Analysis written by Peter Filzmoser and published by Springer Nature. This book was released on 2021-06-01 with total page 404 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents modern methods and real-world applications of compositional data analysis. It covers a wide variety of topics, ranging from an updated presentation of basic concepts and ideas in compositional data analysis to recent advances in the context of complex data structures. Further, it illustrates real-world applications in numerous scientific disciplines and includes references to the latest software solutions available for compositional data analysis, thus providing a valuable and up-to-date guide for researchers and practitioners working with compositional data. Featuring selected contributions by leading experts in the field, the book is dedicated to Vera Pawlowsky-Glahn on the occasion of her 70th birthday.

Book Compositional Data Analysis in Practice

Download or read book Compositional Data Analysis in Practice written by Michael Greenacre and published by CRC Press. This book was released on 2018-07-17 with total page 120 pages. Available in PDF, EPUB and Kindle. Book excerpt: Compositional Data Analysis in Practice is a user-oriented practical guide to the analysis of data with the property of a constant sum, for example percentages adding up to 100%. Compositional data can give misleading results if regular statistical methods are applied, and are best analysed by first transforming them to logarithms of ratios. This book explains how this transformation affects the analysis, results and interpretation of this very special type of data. All aspects of compositional data analysis are considered: visualization, modelling, dimension-reduction, clustering and variable selection, with many examples in the fields of food science, archaeology, sociology and biochemistry, and a final chapter containing a complete case study using fatty acid compositions in ecology. The applicability of these methods extends to other fields such as linguistics, geochemistry, marketing, economics and finance. R Software The following repository contains data files and R scripts from the book https://github.com/michaelgreenacre/CODAinPractice. The R package easyCODA, which accompanies this book, is available on CRAN -- note that you should have version 0.25 or higher. The latest version of the package will always be available on R-Forge and can be installed from R with this instruction: install.packages("easyCODA", repos="http://R-Forge.R-project.org").

Book Analyzing Compositional Data with R

Download or read book Analyzing Compositional Data with R written by K. Gerald van den Boogaart and published by Springer Science & Business Media. This book was released on 2013-06-29 with total page 269 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents the statistical analysis of compositional data sets, i.e., data in percentages, proportions, concentrations, etc. The subject is covered from its grounding principles to the practical use in descriptive exploratory analysis, robust linear models and advanced multivariate statistical methods, including zeros and missing values, and paying special attention to data visualization and model display issues. Many illustrated examples and code chunks guide the reader into their modeling and interpretation. And, though the book primarily serves as a reference guide for the R package “compositions,” it is also a general introductory text on Compositional Data Analysis. Awareness of their special characteristics spread in the Geosciences in the early sixties, but a strategy for properly dealing with them was not available until the works of Aitchison in the eighties. Since then, research has expanded our understanding of their theoretical principles and the potentials and limitations of their interpretation. This is the first comprehensive textbook addressing these issues, as well as their practical implications with regard to software. The book is intended for scientists interested in statistically analyzing their compositional data. The subject enjoys relatively broad awareness in the geosciences and environmental sciences, but the spectrum of recent applications also covers areas like medicine, official statistics, and economics. Readers should be familiar with basic univariate and multivariate statistics. Knowledge of R is recommended but not required, as the book is self-contained.

Book Compositional Data Analysis in Practice

Download or read book Compositional Data Analysis in Practice written by Michael J. Greenacre and published by Chapman & Hall/CRC. This book was released on 2019 with total page 120 pages. Available in PDF, EPUB and Kindle. Book excerpt: Compositional Data Analysis in Practice is a user-oriented practical guide to the analysis of data with the property of a constant sum, for example percentages adding up to 100%. Compositional data can give misleading results if regular statistical methods are applied, and are best analysed by first transforming them to logarithms of ratios. This book explains how this transformation affects the analysis, results and interpretation of this very special type of data. All aspects of compositional data analysis are considered: visualization, modelling, dimension-reduction, clustering and variable selection, with many examples in the fields of food science, archaeology, sociology and biochemistry, and a final chapter containing a complete case study using fatty acid compositions in ecology. The applicability of these methods extends to other fields such as linguistics, geochemistry, marketing, economics and finance. R Software The following repository contains data files and R scripts from the book https://github.com/michaelgreenacre/CODAinPractice . The R package easyCODA, which accompanies this book, is available on CRAN -- note that you should have version 0.25 or higher. The latest version of the package will always be available on R-Forge and can be installed from R with this instruction: install.packages("easyCODA", repos="http://R-Forge.R-project.org").

Book Applied Compositional Data Analysis

Download or read book Applied Compositional Data Analysis written by Peter Filzmoser and published by Springer. This book was released on 2018-11-03 with total page 288 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents the statistical analysis of compositional data using the log-ratio approach. It includes a wide range of classical and robust statistical methods adapted for compositional data analysis, such as supervised and unsupervised methods like PCA, correlation analysis, classification and regression. In addition, it considers special data structures like high-dimensional compositions and compositional tables. The methodology introduced is also frequently compared to methods which ignore the specific nature of compositional data. It focuses on practical aspects of compositional data analysis rather than on detailed theoretical derivations, thus issues like graphical visualization and preprocessing (treatment of missing values, zeros, outliers and similar artifacts) form an important part of the book. Since it is primarily intended for researchers and students from applied fields like geochemistry, chemometrics, biology and natural sciences, economics, and social sciences, all the proposed methods are accompanied by worked-out examples in R using the package robCompositions.

Book Modeling and Analysis of Compositional Data

Download or read book Modeling and Analysis of Compositional Data written by Vera Pawlowsky-Glahn and published by John Wiley & Sons. This book was released on 2015-03-30 with total page 274 pages. Available in PDF, EPUB and Kindle. Book excerpt: Modeling and Analysis of Compositional Data presents a practical and comprehensive introduction to the analysis of compositional data along with numerous examples to illustrate both theory and application of each method. Based upon short courses delivered by the authors, it provides a complete and current compendium of fundamental to advanced methodologies along with exercises at the end of each chapter to improve understanding, as well as data and a solutions manual which is available on an accompanying website. Complementing Pawlowsky-Glahn’s earlier collective text that provides an overview of the state-of-the-art in this field, Modeling and Analysis of Compositional Data fills a gap in the literature for a much-needed manual for teaching, self learning or consulting.

Book Handbook of Mathematical Geosciences

Download or read book Handbook of Mathematical Geosciences written by B.S. Daya Sagar and published by Springer. This book was released on 2018-06-25 with total page 911 pages. Available in PDF, EPUB and Kindle. Book excerpt: This Open Access handbook published at the IAMG's 50th anniversary, presents a compilation of invited path-breaking research contributions by award-winning geoscientists who have been instrumental in shaping the IAMG. It contains 45 chapters that are categorized broadly into five parts (i) theory, (ii) general applications, (iii) exploration and resource estimation, (iv) reviews, and (v) reminiscences covering related topics like mathematical geosciences, mathematical morphology, geostatistics, fractals and multifractals, spatial statistics, multipoint geostatistics, compositional data analysis, informatics, geocomputation, numerical methods, and chaos theory in the geosciences.

Book The Statistical Analysis of Compositional Data

Download or read book The Statistical Analysis of Compositional Data written by John Aitchison and published by . This book was released on 2003 with total page 416 pages. Available in PDF, EPUB and Kindle. Book excerpt: Originally published in 1986, this text contains a new Foreword, extensive postscript detailing developments in the field since its first publication, and a selection of more recent literature references. The work provides a clear and systematic account of statistical methods designed to meet the special needs of the compositional data analyst. (Mathematics)

Book Geostatistical Functional Data Analysis

Download or read book Geostatistical Functional Data Analysis written by Jorge Mateu and published by John Wiley & Sons. This book was released on 2021-12-13 with total page 452 pages. Available in PDF, EPUB and Kindle. Book excerpt: Geostatistical Functional Data Analysis Explore the intersection between geostatistics and functional data analysis with this insightful new reference Geostatistical Functional Data Analysis presents a unified approach to modelling functional data when spatial and spatio-temporal correlations are present. The Editors link together the wide research areas of geostatistics and functional data analysis to provide the reader with a new area called geostatistical functional data analysis that will bring new insights and new open questions to researchers coming from both scientific fields. This book provides a complete and up-to-date account to deal with functional data that is spatially correlated, but also includes the most innovative developments in different open avenues in this field. Containing contributions from leading experts in the field, this practical guide provides readers with the necessary tools to employ and adapt classic statistical techniques to handle spatial regression. The book also includes: A thorough introduction to the spatial kriging methodology when working with functions A detailed exposition of more classical statistical techniques adapted to the functional case and extended to handle spatial correlations Practical discussions of ANOVA, regression, and clustering methods to explore spatial correlation in a collection of curves sampled in a region In-depth explorations of the similarities and differences between spatio-temporal data analysis and functional data analysis Aimed at mathematicians, statisticians, postgraduate students, and researchers involved in the analysis of functional and spatial data, Geostatistical Functional Data Analysis will also prove to be a powerful addition to the libraries of geoscientists, environmental scientists, and economists seeking insightful new knowledge and questions at the interface of geostatistics and functional data analysis.

Book Multivariate Analysis of Ecological Data

Download or read book Multivariate Analysis of Ecological Data written by Michael Greenacre and published by Fundacion BBVA. This book was released on 2014-01-09 with total page 336 pages. Available in PDF, EPUB and Kindle. Book excerpt: La diversidad biológica es fruto de la interacción entre numerosas especies, ya sean marinas, vegetales o animales, a la par que de los muchos factores limitantes que caracterizan el medio que habitan. El análisis multivariante utiliza las relaciones entre diferentes variables para ordenar los objetos de estudio según sus propiedades colectivas y luego clasificarlos; es decir, agrupar especies o ecosistemas en distintas clases compuestas cada una por entidades con propiedades parecidas. El fin último es relacionar la variabilidad biológica observada con las correspondientes características medioambientales. Multivariate Analysis of Ecological Data explica de manera completa y estructurada cómo analizar e interpretar los datos ecológicos observados sobre múltiples variables, tanto biológicos como medioambientales. Tras una introducción general a los datos ecológicos multivariantes y la metodología estadística, se abordan en capítulos específicos, métodos como aglomeración (clustering), regresión, biplots, escalado multidimensional, análisis de correspondencias (simple y canónico) y análisis log-ratio, con atención también a sus problemas de modelado y aspectos inferenciales. El libro plantea una serie de aplicaciones a datos reales derivados de investigaciones ecológicas, además de dos casos detallados que llevan al lector a apreciar los retos de análisis, interpretación y comunicación inherentes a los estudios a gran escala y los diseños complejos.

Book Correspondence Analysis in Practice

Download or read book Correspondence Analysis in Practice written by Michael Greenacre and published by CRC Press. This book was released on 2017-01-20 with total page 327 pages. Available in PDF, EPUB and Kindle. Book excerpt: Drawing on the author’s 45 years of experience in multivariate analysis, Correspondence Analysis in Practice, Third Edition, shows how the versatile method of correspondence analysis (CA) can be used for data visualization in a wide variety of situations. CA and its variants, subset CA, multiple CA and joint CA, translate two-way and multi-way tables into more readable graphical forms — ideal for applications in the social, environmental and health sciences, as well as marketing, economics, linguistics, archaeology, and more. Michael Greenacre is Professor of Statistics at the Universitat Pompeu Fabra, Barcelona, Spain, where he teaches a course, amongst others, on Data Visualization. He has authored and co-edited nine books and 80 journal articles and book chapters, mostly on correspondence analysis, the latest being Visualization and Verbalization of Data in 2015. He has given short courses in fifteen countries to environmental scientists, sociologists, data scientists and marketing professionals, and has specialized in statistics in ecology and social science.

Book Flexible Imputation of Missing Data  Second Edition

Download or read book Flexible Imputation of Missing Data Second Edition written by Stef van Buuren and published by CRC Press. This book was released on 2018-07-17 with total page 444 pages. Available in PDF, EPUB and Kindle. Book excerpt: Missing data pose challenges to real-life data analysis. Simple ad-hoc fixes, like deletion or mean imputation, only work under highly restrictive conditions, which are often not met in practice. Multiple imputation replaces each missing value by multiple plausible values. The variability between these replacements reflects our ignorance of the true (but missing) value. Each of the completed data set is then analyzed by standard methods, and the results are pooled to obtain unbiased estimates with correct confidence intervals. Multiple imputation is a general approach that also inspires novel solutions to old problems by reformulating the task at hand as a missing-data problem. This is the second edition of a popular book on multiple imputation, focused on explaining the application of methods through detailed worked examples using the MICE package as developed by the author. This new edition incorporates the recent developments in this fast-moving field. This class-tested book avoids mathematical and technical details as much as possible: formulas are accompanied by verbal statements that explain the formula in accessible terms. The book sharpens the reader’s intuition on how to think about missing data, and provides all the tools needed to execute a well-grounded quantitative analysis in the presence of missing data.