Download or read book Cellular Automata and Complex Systems Methods for Modeling Biological Phenomena written by Bilotta, Eleonora and published by IGI Global. This book was released on 2010-06-30 with total page 502 pages. Available in PDF, EPUB and Kindle. Book excerpt: "The theme of this book is the use of Cellular Automatas (CAs) to model biological systems, describing 2-D CAs to create populations of "life-like agents" with their own genomes"--Provided by publisher.
Download or read book Cellular Automaton Modeling of Biological Pattern Formation written by Andreas Deutsch and published by Springer Science & Business Media. This book was released on 2007-12-26 with total page 331 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book focuses on a challenging application field of cellular automata: pattern formation in biological systems, such as the growth of microorganisms, dynamics of cellular tissue and tumors, and formation of pigment cell patterns. These phenomena, resulting from complex cellular interactions, cannot be deduced solely from experimental analysis, but can be more easily examined using mathematical models, in particular, cellular automaton models. While there are various books treating cellular automaton modeling, this interdisciplinary work is the first one covering biological applications. The book is aimed at researchers, practitioners, and students in applied mathematics, mathematical biology, computational physics, bioengineering, and computer science interested in a cellular automaton approach to biological modeling.
Download or read book Simulating Complex Systems by Cellular Automata written by Alfons G. Hoekstra and published by Springer Science & Business Media. This book was released on 2010-06-13 with total page 392 pages. Available in PDF, EPUB and Kindle. Book excerpt: Deeply rooted in fundamental research in Mathematics and Computer Science, Cellular Automata (CA) are recognized as an intuitive modeling paradigm for Complex Systems. Already very basic CA, with extremely simple micro dynamics such as the Game of Life, show an almost endless display of complex emergent behavior. Conversely, CA can also be designed to produce a desired emergent behavior, using either theoretical methodologies or evolutionary techniques. Meanwhile, beyond the original realm of applications - Physics, Computer Science, and Mathematics – CA have also become work horses in very different disciplines such as epidemiology, immunology, sociology, and finance. In this context of fast and impressive progress, spurred further by the enormous attraction these topics have on students, this book emerges as a welcome overview of the field for its practitioners, as well as a good starting point for detailed study on the graduate and post-graduate level. The book contains three parts, two major parts on theory and applications, and a smaller part on software. The theory part contains fundamental chapters on how to design and/or apply CA for many different areas. In the applications part a number of representative examples of really using CA in a broad range of disciplines is provided - this part will give the reader a good idea of the real strength of this kind of modeling as well as the incentive to apply CA in their own field of study. Finally, we included a smaller section on software, to highlight the important work that has been done to create high quality problem solving environments that allow to quickly and relatively easily implement a CA model and run simulations, both on the desktop and if needed, on High Performance Computing infrastructures.
Download or read book Modeling Chemical Systems using Cellular Automata written by Lemont B. Kier and published by Springer Science & Business Media. This book was released on 2006-02-23 with total page 177 pages. Available in PDF, EPUB and Kindle. Book excerpt: Modeling Chemical Systems using Cellular Automata provides a practical introduction to an exciting modeling paradigm for complex systems. The book first discusses the nature of scientific inquiry using models and simulations, and then describes the nature of cellular automata models. It then gives detailed descriptions, with examples and exercises, of how cellular automata models can be used in the study of a wide variety chemical, physical, and biochemical phenomena. Topics covered include models of water itself, solution phenomena, solution interactions with stationary systems, first- and second-order kinetic phenomena, enzyme kinetics, vapor-liquid equilibrium, and atomic and molecular excited-state kinetics. The student experiences these systems through hands-on examples and guided studies. This book is the first of its kind: a textbook and a laboratory manual about cellular automata modeling of common systems in chemistry. The book is designed to be used as a text in undergraduate courses dealing with complex systems and/or as a computational supplement to laboratory courses taught at the undergraduate level. The book includes: - Compact descriptions of a large variety of physical and chemical phenomena - Illustrative examples of simulations, with exercises for further study - An instructor's manual for use of the program The book will be of great value in undergraduate courses in chemistry, physics, biology, applied mathematics, and bioinformatics, and as a supplement for laboratory courses in introductory chemistry, organic chemistry, physical chemistry, medicinal chemistry, chemical engineering and other courses dealing with statistical and dynamic systems. It allows the exploration of a wide range of dynamic phenomena, many of which are not normally accessible within conventional laboratory settings due to limitations of time, cost, and experimental equipment. The book is both a textbook on applied Cellular Automata and a lab manual for chemistry (physics, engineering) courses with lab activity. It would supplement other lab work and be an additonal book the students would use in the course. The authors have assessed the emerging need for this kind of activity in science labs because of the cost of the practical activitites and the frequent failure of some exercises leading to lost didactic value of some experiments. This book is pioneering an alternative that will grow in use. There are no course directors who would use Cellular Automata exclusively. The authors see an emerging interest in this kind of work in courses that contain lab exercises. One such course is the graduate course that Lemont Kier gives in Life Sciences about complexity. He uses many examples and studies from Cellular Automata in the latter part of this course.
Download or read book New Methods and Paradigms for Modeling Dynamic Processes Based on Cellular Automata written by Bilan, Stepan Mykolayovych and published by IGI Global. This book was released on 2020-10-16 with total page 326 pages. Available in PDF, EPUB and Kindle. Book excerpt: The accelerating development of computer technology and communications can replace many of the functions of human intellectual activity, as well as help them in making decisions in various situations of their lives. To implement intelligent functions for various purposes, numerous models, paradigms, architectures, and hardware and software are being developed. Because the world is constantly evolving, there is a need to constantly study various dynamic processes to determine possible negative situations that can lead to undesirable catastrophic phenomena and changes. Recently, more attention has been paid to the study of natural processes in nature. Scientific works are appearing that describe the behavior and development of living organisms and the processes of their interaction. Cellular automata are increasingly used to describe and model them. New Methods and Paradigms for Modeling Dynamic Processes Based on Cellular Automata is a collection of innovative research that describes the models and paradigms of building cellular automata that allows for the simulation of the dynamics of the interaction of living organisms from a different scientific point of view. For this, asynchronous cellular automata with a dynamically changing number of “living” cells are used. The chapters describe the theoretical concepts of constructing asynchronous cellular automata with active cells. Much attention is paid to the use of the proposed theoretical principles for solving modeling problems and solving specific applied problems of forming pseudorandom sequences and image processing based on modeling of the human visual channel. Featuring research on topics such as colony interaction, image processing and recognition, and influence mode, this book is ideally designed for engineers, programmers, software developers, researchers, academicians, and students.
Download or read book Complex Systems written by David G. Green and published by . This book was released on 1993 with total page 404 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Cellular Automaton Modeling of Biological Pattern Formation written by Andreas Deutsch and published by Birkhäuser. This book was released on 2018-03-09 with total page 470 pages. Available in PDF, EPUB and Kindle. Book excerpt: This text explores the use of cellular automata in modeling pattern formation in biological systems. It describes several mathematical modeling approaches utilizing cellular automata that can be used to study the dynamics of interacting cell systems both in simulation and in practice. New in this edition are chapters covering cell migration, tissue development, and cancer dynamics, as well as updated references and new research topic suggestions that reflect the rapid development of the field. The book begins with an introduction to pattern-forming principles in biology and the various mathematical modeling techniques that can be used to analyze them. Cellular automaton models are then discussed in detail for different types of cellular processes and interactions, including random movement, cell migration, adhesive cell interaction, alignment and cellular swarming, growth processes, pigment cell pattern formation, tissue development, tumor growth and invasion, and Turing-type patterns and excitable media. In the final chapter, the authors critically discuss possibilities and limitations of the cellular automaton approach in modeling various biological applications, along with future research directions. Suggestions for research projects are provided throughout the book to encourage additional engagement with the material, and an accompanying simulator is available for readers to perform their own simulations on several of the models covered in the text. QR codes are included within the text for easy access to the simulator. With its accessible presentation and interdisciplinary approach, Cellular Automaton Modeling of Biological Pattern Formation is suitable for graduate and advanced undergraduate students in mathematical biology, biological modeling, and biological computing. It will also be a valuable resource for researchers and practitioners in applied mathematics, mathematical biology, computational physics, bioengineering, and computer science. PRAISE FOR THE FIRST EDITION “An ideal guide for someone with a mathematical or physical background to start exploring biological modelling. Importantly, it will also serve as an excellent guide for experienced modellers to innovate and improve their methodologies for analysing simulation results.” —Mathematical Reviews
Download or read book Theory of Practical Cellular Automaton written by Xuewei Li and published by Springer. This book was released on 2018-05-17 with total page 361 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book addresses the intellectual foundations, function, modeling approaches and complexity of cellular automata; explores cellular automata in combination with genetic algorithms, neural networks and agents; and discusses the applications of cellular automata in economics, traffic and the spread of disease. Pursuing a blended approach between knowledge and philosophy, it assigns equal value to methods and applications.
Download or read book Solvable Cellular Automata written by Henryk Fukś and published by Springer Nature. This book was released on 2023-10-09 with total page 304 pages. Available in PDF, EPUB and Kindle. Book excerpt: The main focus of the book is solvability of cellular automata, that is, expressing the state of a given cell after a given number of steps by an explicit formula. The author considers solutions of two types of initial value problems for cellular automata, the deterministic one and the probabilistic one. In the first chapter the basic concepts of cellular automata theory are introduced. Deterministic initial value problem is introduced next and solutions for selected simple rules are also presented. In the following chapters various techniques for solving the deterministic problem are introduced, using elementary CA rules of increasing complexity as examples. The second part of the book introduces the concept of probability measure in the context of cellular automata and the probabilistic initial value problem for both deterministic and probabilistic rules. The book is amply illustrated with examples and applications such as the density classification problem, phase transitions in traffic models or the diffusion of innovations model. In the appendix, solution formulae (both deterministic and probabilistic) for over 60 elementary cellular automata rules are listed. Ruelle-Frobenius-Perron equations for all 88 minimal elementary cellular automata are also provided.
Download or read book Cellular Automata And Complexity written by Stephen Wolfram and published by CRC Press. This book was released on 2018-03-08 with total page 608 pages. Available in PDF, EPUB and Kindle. Book excerpt: Are mathematical equations the best way to model nature? For many years it had been assumed that they were. But in the early 1980s, Stephen Wolfram made the radical proposal that one should instead build models that are based directly on simple computer programs. Wolfram made a detailed study of a class of such models known as cellular automata, and discovered a remarkable fact: that even when the underlying rules are very simple, the behaviour they produce can be highly complex, and can mimic many features of what we see in nature. And based on this result, Wolfram began a program of research to develop what he called A Science of Complexity."The results of Wolfram's work found many applications, from the so-called Wolfram Classification central to fields such as artificial life, to new ideas about cryptography and fluid dynamics. This book is a collection of Wolfram's original papers on cellular automata and complexity. Some of these papers are widely known in the scientific community others have never been published before. Together, the papers provide a highly readable account of what has become a major new field of science, with important implications for physics, biology, economics, computer science and many other areas.
Download or read book A New Kind of Computational Biology written by Parimal Pal Chaudhuri and published by Springer. This book was released on 2018-09-26 with total page 351 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book reflects more than three decades of research on Cellular Automata (CA), and nearly a decade of work on the application of CA to model biological strings, which forms the foundation of 'A New Kind of Computational Biology' pioneered by the start-up, CARLBio. After a brief introduction on Cellular Automata (CA) theory and functional biology, it reports on the modeling of basic biological strings with CA, starting with the basic nucleotides leading to codon and anti-codon CA models. It derives a more involved CA model of DNA, RNA, the entire translation process for amino acid formation and the evolution of protein to its unique structure and function. In subsequent chapters the interaction of Proteins with other bio-molecules is also modeled. The only prior knowledge assumed necessary is an undergraduate knowledge of computer programming and biology. The book adopts a hands-on, “do-it-yourself” approach to enable readers to apply the method provided to derive the CA rules and comprehend how these are related to the physical ‘rules’ observed in biology. In a single framework, the authors have presented two branches of science – Computation and Biology. Instead of rigorous molecular dynamics modeling, which the authors describe as a Bottoms-Up model, or relying on the Top-Down new age Artificial Intelligence (AI) and Machine Language (ML) that depends on extensive availability of quality data, this book takes the best from both the Top-Down and Bottoms-up approaches and establishes how the behavior of complex molecules is represented in CA. The CA rules are derived from the basic knowledge of molecular interaction and construction observed in biological world but mapped to a few subset of known results to derive and predict results. This book is useful for students, researchers and industry practitioners who want to explore modeling and simulation of the physical world complex systems from a different perspective. It raises the inevitable the question – ‘Are life and the universe nothing but a collection of continuous systems processing information’.
Download or read book Computational Modeling of Biochemical Systems Using Cellular Automata written by Advait Ashok Apte and published by . This book was released on 2010 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Biological systems exhibit complex behaviors through coordinated responses of individual biological components. With the advent of genome-scale techniques, one focus has been to develop methods to model interactions between components to accurately describe intact system function. Mathematical modeling techniques such as constraint-based modeling, agent-based modeling, cellular automata (CA) modeling and differential equation modeling are employed as computational tools to study biological phenomenon. We have shown that cellular automata simulations can be used as a computational tool for 12 predicting the dynamics of biological systems with stochastic behavior. The basic premise for the research was the observations made during a study of biologically important feed-forward motifs where CA simulations were compared with differential equation simulations. It was shown for classes of structural motifs with feed-forward architecture that network topology affects the overall rate of a process in a quantitatively predictable manner. The study which comprised of CA simulations compared with differential equation modeling show reasonable agreement in the predictability of system dynamics, which provided enough support to model biological systems at cellular level to observe dynamic system evolution. The great promise shown by CA simulations to model biochemical systems was then employed to elucidate evolutionary clues as to why biological networks show preference for certain types of motifs and preserve them with higher frequency during evolution. It was followed by modeling apoptotic networks to shed light on the efficacy of inhibitors and to model cellulose hydrolysis to evaluate efficiency of different enzyme systems used by cellulytic bacteria.
Download or read book Cellular Automata written by Alejandro Salcido and published by BoD – Books on Demand. This book was released on 2011-04-11 with total page 584 pages. Available in PDF, EPUB and Kindle. Book excerpt: Cellular automata make up a class of completely discrete dynamical systems, which have became a core subject in the sciences of complexity due to their conceptual simplicity, easiness of implementation for computer simulation, and their ability to exhibit a wide variety of amazingly complex behavior. The feature of simplicity behind complexity of cellular automata has attracted the researchers' attention from a wide range of divergent fields of study of science, which extend from the exact disciplines of mathematical physics up to the social ones, and beyond. Numerous complex systems containing many discrete elements with local interactions have been and are being conveniently modelled as cellular automata. In this book, the versatility of cellular automata as models for a wide diversity of complex systems is underlined through the study of a number of outstanding problems using these innovative techniques for modelling and simulation.
Download or read book The Computer Music Tutorial second edition written by Curtis Roads and published by MIT Press. This book was released on 2023-06-06 with total page 1287 pages. Available in PDF, EPUB and Kindle. Book excerpt: Expanded, updated, and fully revised—the definitive introduction to electronic music is ready for new generations of students. Essential and state-of-the-art, The Computer Music Tutorial, second edition is a singular text that introduces computer and electronic music, explains its motivations, and puts topics into context. Curtis Roads’s step-by-step presentation orients musicians, engineers, scientists, and anyone else new to computer and electronic music. The new edition continues to be the definitive tutorial on all aspects of computer music, including digital audio, signal processing, musical input devices, performance software, editing systems, algorithmic composition, MIDI, and psychoacoustics, but the second edition also reflects the enormous growth of the field since the book’s original publication in 1996. New chapters cover up-to-date topics like virtual analog, pulsar synthesis, concatenative synthesis, spectrum analysis by atomic decomposition, Open Sound Control, spectrum editors, and instrument and patch editors. Exhaustively referenced and cross-referenced, the second edition adds hundreds of new figures and references to the original charts, diagrams, screen images, and photographs in order to explain basic concepts and terms. Features New chapters: virtual analog, pulsar synthesis, concatenative synthesis, spectrum analysis by atomic decomposition, Open Sound Control, spectrum editors, instrument and patch editors, and an appendix on machine learning Two thousand references support the book’s descriptions and point readers to further study Mathematical notation and program code examples used only when necessary Twenty-five years of classroom, seminar, and workshop use inform the pace and level of the material
Download or read book Cellular Automata Machines written by Tommaso Toffoli and published by MIT Press. This book was released on 1987 with total page 284 pages. Available in PDF, EPUB and Kindle. Book excerpt: Theory of Computation -- Computation by Abstracts Devices.
Download or read book Cellular Automata and Complex Systems written by E. Goles and published by Springer Science & Business Media. This book was released on 2013-11-27 with total page 187 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book contains the courses given at the Fifth School on Complex Systems held at Santiago, Chile, from 9th .to 13th December 1996. At this school met researchers working on areas related with recent trends in Complex Systems, which include dynamical systems, cellular automata, symbolic dynamics, spatial systems, statistical physics and thermodynamics. Scientists working in these subjects come from several areas: pure and applied mathematics, physics, biology, computer science and electrical engineering. Each contribution is devoted to one of the above subjects. In most cases they are structured as surveys, presenting at the same time an original point of view about the topic and showing mostly new results. The paper of Bruno Durand presents the state of the art on the relationships between the notions of surjectivity, injectivity and reversibility in cellular automata when finite, infinite or periodic configurations are considered, also he discusses decidability problems related with the classification of cellular automata as well as global properties mentioned above. The paper of Eric Goles and Martin Matamala gives a uniform presentation of simulations of Turing machines by cellular automata. The main ingredient is the encoding function which must be fixed for all Turing machine. In this context known results are revised and new results are presented.
Download or read book Interoperability in Healthcare Information Systems Standards Management and Technology written by Sicilia, Miguel Ángel and published by IGI Global. This book was released on 2013-06-30 with total page 336 pages. Available in PDF, EPUB and Kindle. Book excerpt: Although the standards in electronic health records and general healthcare services continue to evolve, many organizations push to connect interoperability with public service and basic citizenship rights. This poses significant technical and organizational challenges that are the focus of many research and standardization efforts. Interoperability in Healthcare Information Systems: Standards, Management and Technology provides a comprehensive collection on the overview of electronic health records and health services interoperability and the different aspects representing its outlook in a framework that is useful for practitioners, researchers, and decision-makers.
