Download or read book Advances in Statistical Methods for the Genetic Dissection of Complex Traits in Plants written by Yuan-Ming Zhang and published by Frontiers Media SA. This book was released on 2024-01-26 with total page 278 pages. Available in PDF, EPUB and Kindle. Book excerpt: Genome-wide association studies (GWAS) have been widely used in the genetic dissection of complex traits. However, there are still limits in current GWAS statistics. For example, (1) almost all the existing methods do not estimate additive and dominance effects in quantitative trait nucleotide (QTN) detection; (2) the methods for detecting QTN-by-environment interaction (QEI) are not straightforward and do not estimate additive and dominance effects as well as additive-by-environment and dominance-by-environment interaction effects, leading to unreliable results; and (3) no or too simple polygenic background controls have been employed in QTN-by-QTN interaction (QQI) detection. As a result, few studies of QEI and QQI for complex traits have been reported based on multiple-environment experiments. Recently, new statistical tools, including 3VmrMLM, have been developed to address these needs in GWAS. In 3VmrMLM, all the trait-associated effects, including QTN, QEI and QQI related effects, are compressed into a single effect-related vector, while all the polygenic backgrounds are compressed into a single polygenic effect matrix. These compressed parameters can be accurately and efficiently estimated through a unified mixed model analysis. To further validate these new GWAS methods, particularly 3VmrMLM, they should be rigorously tested in real data of various plants and a wide range of other species.

Download or read book Biometrical Analysis of Upland Cotton Grown at Stillwater Oklahoma written by Fred Griffee and published by . This book was released on 1929 with total page 48 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Technical Bulletin written by and published by . This book was released on 1956 with total page 1200 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book The Indian Journal of Genetics Plant Breeding written by and published by . This book was released on 1941 with total page 474 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Genetics and Genomics of Cotton written by Andrew H. Paterson and published by Springer Science & Business Media. This book was released on 2009-03-11 with total page 515 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Gossypium (cotton) genus presents novel opportunities to advance our understanding of the natural world and its organic evolution. In this book, advances of the past decade are summarized and synthesized to elucidate the current state of knowledge of the structure, function, and evolution of the Gossypium genome, and progress in the application of this knowledge to cotton improvement. This book provides the first comprehensive reference on cotton genomics.

Download or read book Comprehensive Dissertation Index written by and published by . This book was released on 1973 with total page 1244 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Experiment Station Bulletin written by and published by . This book was released on 1928 with total page 356 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Bulletin B written by and published by . This book was released on 1928 with total page 814 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Masters Theses in the Pure and Applied Sciences written by Wade H. Shafer and published by Springer Science & Business Media. This book was released on 2013-12-11 with total page 299 pages. Available in PDF, EPUB and Kindle. Book excerpt: Masters Theses in the Pure and Applied Sciences was first conceived, published, and dis seminated by the Center for Information and Numerical Data Analysis and Synthesis, (CINDAS) *at Purdue University in 1957, starting its coverage of theses with the academic year 1955. Beginning with Volume 13, the printing and dissemination phases of the ac tivity was transferred to University Microfilms/Xerox of Ann Arbor, Michigan, with the thought that such an arrangement would be more beneficial to the academic and general scientific and technical community. After five years of this joint undertaking we had concluded that it was in the interest of all concerned if the printing and distribution of the volume were handled by an international publishing house to assure improved service and broader dissemination. Hence, starting with Volume 18, Masters Theses in the Pure and Applied Sciences has been disseminated on a worldwide basis by Plenum Publishing Corporation of New York, and in the same year the coverage was broadened to include Canadian universities. All back issues can also be ordered from Plenum. We have reported in Volume 19 (thesis year 1974) a total of 10,045 theses titles from 20 Canadian and 209 United States universities. We are sure that this broader base for theses titles reported will greatly enhance the value of this important annual reference work. The organization of Volume 19 is identical to that of past years. It consists of theses titles arranged by discipline and by university within each discipline.

Download or read book Plant Breeding Abstracts written by and published by . This book was released on 1999 with total page 1132 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Costs of Producing Upland Cotton in the United States 1969 written by Irving Rollins Starbird and published by . This book was released on 1972 with total page 52 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Trends in Cotton Breeding Meeting the Challenges of the 21st Century written by Linghe Zeng and published by Frontiers Media SA. This book was released on 2022-11-07 with total page 297 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Bibliography of Agriculture written by and published by . This book was released on 1976 with total page 1732 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book World Cotton Germplasm Resources written by Ibrokhim Y. Abdurakhmonov and published by BoD – Books on Demand. This book was released on 2014-07-02 with total page 324 pages. Available in PDF, EPUB and Kindle. Book excerpt: Preservation of plant germplasm resources is vitally important for mankind to supply food and product security in the globalization and technological advances of the 21st century. Mankind preserved a wealth of available genetic resources of many plant species worldwide. One of the such worldwide plant germplasm resources is available for cotton, a unique natural fiber producing cash crop for mankind. Worldwide cotton germplasm collections exist in Australia, Brazil, China, India, France, Pakistan, Turkey, Russia, United States of America, and Uzbekistan. The objective of World Cotton Germplasm Resources book is to present readers with updated information on existing cotton germplasm resources, highlighting detailed inventory, description, storage conditions, characterization and utilization as well as challenges and perspectives. This book should be a comprehensive encyclopedic reading source for plant research community and students to gather important information on worldwide cotton germplasm resources.

Download or read book The Applications of New Multi Locus GWAS Methodologies in the Genetic Dissection of Complex Traits written by Yuan-Ming Zhang and published by Frontiers Media SA. This book was released on 2019-06-19 with total page 236 pages. Available in PDF, EPUB and Kindle. Book excerpt: Genome-Wide Association Studies (GWAS) are widely used in the genetic dissection of complex traits. Most existing methods are based on single-marker association in genome-wide scans with population structure and polygenic background controls. To control the false positive rate, the Bonferroni correction for multiple tests is frequently adopted. This stringent correction results in the exclusion of important loci, especially for GWAS in crop genetics. To address this issue, multi-locus GWAS methodologies have been recommended, i.e., FASTmrEMMA, ISIS EM-BLASSO, mrMLM, FASTmrMLM, pLARmEB, pKWmEB and FarmCPU. In this Research Topic, our purpose is to clarify some important issues in the application of multi-locus GWAS methods. Here we discuss the following subjects: First, we discuss the advantages of new multi-locus GWAS methods over the widely-used single-locus GWAS methods in the genetic dissection of complex traits, metabolites and gene expression levels. Secondly, large experiment error in the field measurement of phenotypic values for complex traits in crop genetics results in relatively large P-values in GWAS, indicating the existence of small number of significantly associated SNPs. To solve this issue, a less stringent P-value critical value is often adopted, i.e., 0.001, 0.0001 and 1/m (m is the number of markers). Although lowering the stringency with which an association is made could identify more hits, confidence in these hits would significantly drop. In this Research Topic we propose a new threshold of significant QTN (LOD=3.0 or P-value=2.0e-4) in multi-locus GWAS to balance high power and low false positive rate. Thirdly, heritability missing in GWAS is a common phenomenon, and a series of scientists have explained the reasons why the heritability is missing. In this Research Topic, we also add one additional reason and propose the joint use of several GWAS methodologies to capture more QTNs. Thus, overall estimated heritability would be increased. Finally, we discuss how to select and use these multi-locus GWAS methods.

Download or read book Technical Note written by and published by . This book was released on 1921 with total page 1066 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Report of the Chief of the Bureau of Plant Industry written by United States. Bureau of Plant Industry and published by . This book was released on 1930 with total page 464 pages. Available in PDF, EPUB and Kindle. Book excerpt: