Download or read book The Theoretical Biologist s Toolbox written by Marc Mangel and published by Cambridge University Press. This book was released on 2006-07-27 with total page 323 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mathematical modelling is widely used in ecology and evolutionary biology and it is a topic that many biologists find difficult to grasp. In this new textbook Marc Mangel provides a no-nonsense introduction to the skills needed to understand the principles of theoretical and mathematical biology. Fundamental theories and applications are introduced using numerous examples from current biological research, complete with illustrations to highlight key points. Exercises are also included throughout the text to show how theory can be applied and to test knowledge gained so far. Suitable for advanced undergraduate courses in theoretical and mathematical biology, this book forms an essential resource for anyone wanting to gain an understanding of theoretical ecology and evolution.
Download or read book Methods and Models in Mathematical Biology written by Johannes Müller and published by Springer. This book was released on 2015-08-13 with total page 721 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book developed from classes in mathematical biology taught by the authors over several years at the Technische Universität München. The main themes are modeling principles, mathematical principles for the analysis of these models and model-based analysis of data. The key topics of modern biomathematics are covered: ecology, epidemiology, biochemistry, regulatory networks, neuronal networks and population genetics. A variety of mathematical methods are introduced, ranging from ordinary and partial differential equations to stochastic graph theory and branching processes. A special emphasis is placed on the interplay between stochastic and deterministic models.
Download or read book A Biologist s Guide to Mathematical Modeling in Ecology and Evolution written by Sarah P. Otto and published by Princeton University Press. This book was released on 2011-09-19 with total page 745 pages. Available in PDF, EPUB and Kindle. Book excerpt: Thirty years ago, biologists could get by with a rudimentary grasp of mathematics and modeling. Not so today. In seeking to answer fundamental questions about how biological systems function and change over time, the modern biologist is as likely to rely on sophisticated mathematical and computer-based models as traditional fieldwork. In this book, Sarah Otto and Troy Day provide biology students with the tools necessary to both interpret models and to build their own. The book starts at an elementary level of mathematical modeling, assuming that the reader has had high school mathematics and first-year calculus. Otto and Day then gradually build in depth and complexity, from classic models in ecology and evolution to more intricate class-structured and probabilistic models. The authors provide primers with instructive exercises to introduce readers to the more advanced subjects of linear algebra and probability theory. Through examples, they describe how models have been used to understand such topics as the spread of HIV, chaos, the age structure of a country, speciation, and extinction. Ecologists and evolutionary biologists today need enough mathematical training to be able to assess the power and limits of biological models and to develop theories and models themselves. This innovative book will be an indispensable guide to the world of mathematical models for the next generation of biologists. A how-to guide for developing new mathematical models in biology Provides step-by-step recipes for constructing and analyzing models Interesting biological applications Explores classical models in ecology and evolution Questions at the end of every chapter Primers cover important mathematical topics Exercises with answers Appendixes summarize useful rules Labs and advanced material available
Download or read book Modelling for Field Biologists and Other Interesting People written by Hanna Kokko and published by Cambridge University Press. This book was released on 2007-06-28 with total page 252 pages. Available in PDF, EPUB and Kindle. Book excerpt: A friendly 2007 guide to mathematical modelling for evolutionary and behavioural ecologists.
Download or read book Computing Skills for Biologists written by Stefano Allesina and published by Princeton University Press. This book was released on 2019 with total page 440 pages. Available in PDF, EPUB and Kindle. Book excerpt: A concise introduction to key computing skills for biologists While biological data continues to grow exponentially in size and quality, many of today's biologists are not trained adequately in the computing skills necessary for leveraging this information deluge. In Computing Skills for Biologists, Stefano Allesina and Madlen Wilmes present a valuable toolbox for the effective analysis of biological data. Based on the authors' experiences teaching scientific computing at the University of Chicago, this textbook emphasizes the automation of repetitive tasks and the construction of pipelines for data organization, analysis, visualization, and publication. Stressing practice rather than theory, the book's examples and exercises are drawn from actual biological data and solve cogent problems spanning the entire breadth of biological disciplines, including ecology, genetics, microbiology, and molecular biology. Beginners will benefit from the many examples explained step-by-step, while more seasoned researchers will learn how to combine tools to make biological data analysis robust and reproducible. The book uses free software and code that can be run on any platform. Computing Skills for Biologists is ideal for scientists wanting to improve their technical skills and instructors looking to teach the main computing tools essential for biology research in the twenty-first century. Excellent resource for acquiring comprehensive computing skills Both novice and experienced scientists will increase efficiency by building automated and reproducible pipelines for biological data analysis Code examples based on published data spanning the breadth of biological disciplines Detailed solutions provided for exercises in each chapter Extensive companion website
Download or read book The Mating Mind written by Geoffrey Miller and published by Anchor. This book was released on 2011-12-21 with total page 530 pages. Available in PDF, EPUB and Kindle. Book excerpt: At once a pioneering study of evolution and an accessible and lively reading experience, a book that offers the most convincing—and radical—explanation for how and why the human mind evolved. Consciousness, morality, creativity, language, and art: these are the traits that make us human. Scientists have traditionally explained these qualities as merely a side effect of surplus brain size, but Miller argues that they were sexual attractors, not side effects. He bases his argument on Darwin’ s theory of sexual selection, which until now has played second fiddle to Darwin’ s theory of natural selection, and draws on ideas and research from a wide range of fields, including psychology, economics, history, and pop culture. Witty, powerfully argued, and continually thought-provoking, The Mating Mind is a landmark in our understanding of our own species.
Download or read book Medical Science and Bioethics written by United States. Congress. House. Committee on Government Reform. Subcommittee on Criminal Justice, Drug Policy, and Human Resources and published by . This book was released on 2003 with total page 524 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book From Biological Practice to Scientific Metaphysics written by William C. Bausman and published by U of Minnesota Press. This book was released on 2024-01-09 with total page 312 pages. Available in PDF, EPUB and Kindle. Book excerpt: How analyzing scientific practices can alter debates on the relationship between science and reality Numerous scholarly works focus solely on scientific metaphysics or biological practice, but few attempt to bridge the two subjects. This volume, the latest in the Minnesota Studies in the Philosophy of Science series, explores what a scientific metaphysics grounded in biological practices could look like and how it might impact the way we investigate the world around us. From Biological Practice to Scientific Metaphysics examines how to reconcile the methods of biological practice with the methods of metaphysical cosmology, notably regarding the origins of life. The contributors take up a wide range of traditional metaphysics and philosophy of science topics, including natural kinds, medicine, ecology, genetics, scientific pluralism, reductionism, operationalism, mechanisms, the nature of information, and more. Many of the chapters represent the first philosophical treatments of significant biological practices. From causality and complexity to niche constructions and inference, the contributors review and discuss long-held objections to metaphysics by natural scientists. They illuminate how, in order to learn about the world as it truly is, we must look not only at what scientists say but also what they do: for ontology cannot be read directly from scientific claims. Contributors: Richard Creath, Arizona State U; Marc Ereshefsky, U of Calgary; Marie I. Kaiser, Bielefeld U; Thomas A. C. Reydon, Leibniz U Hannover and Michigan State U; Lauren N. Ross, U of California, Irvine; Rose Trappes, U of Exeter; Marcel Weber, U of Geneva; William C. Wimsatt, U of Chicago. Retail e-book files for this title are screen-reader friendly with images accompanied by short alt text and/or extended descriptions.
Download or read book Quantum Techniques In Stochastic Mechanics written by John C Baez and published by World Scientific. This book was released on 2018-02-14 with total page 276 pages. Available in PDF, EPUB and Kindle. Book excerpt: We introduce the theory of chemical reaction networks and their relation to stochastic Petri nets — important ways of modeling population biology and many other fields. We explain how techniques from quantum mechanics can be used to study these models. This relies on a profound and still mysterious analogy between quantum theory and probability theory, which we explore in detail. We also give a tour of key results concerning chemical reaction networks and Petri nets.
Download or read book The Toolbox for the Mind written by D. Keith Denton and published by . This book was released on 1999 with total page 216 pages. Available in PDF, EPUB and Kindle. Book excerpt: This text takes an interdisciplinary approach to creativity by drawing on disciplines other than normal management areas, such as psychology, sociology and engineering. The book instead draws upon such disciplines as physics, history, biology, and chaos theory.
Download or read book Introductory Fisheries Analyses with R written by Derek H. Ogle and published by CRC Press. This book was released on 2018-09-03 with total page 364 pages. Available in PDF, EPUB and Kindle. Book excerpt: A How-To Guide for Conducting Common Fisheries-Related Analyses in R Introductory Fisheries Analyses with R provides detailed instructions on performing basic fisheries stock assessment analyses in the R environment. Accessible to practicing fisheries scientists as well as advanced undergraduate and graduate students, the book demonstrates the flexibility and power of R, offers insight into the reproducibility of script-based analyses, and shows how the use of R leads to more efficient and productive work in fisheries science. The first three chapters present a minimal introduction to the R environment that builds a foundation for the fisheries-specific analyses in the remainder of the book. These chapters help you become familiar with R for basic fisheries analyses and graphics. Subsequent chapters focus on methods to analyze age comparisons, age-length keys, size structure, weight-length relationships, condition, abundance (from capture-recapture and depletion data), mortality rates, individual growth, and the stock-recruit relationship. The fundamental statistical methods of linear regression, analysis of variance (ANOVA), and nonlinear regression are demonstrated within the contexts of these common fisheries analyses. For each analysis, the author completely explains the R functions and provides sufficient background information so that you can confidently implement each method. Web Resource The author’s website at http://derekogle.com/IFAR/ includes the data files and R code for each chapter, enabling you to reproduce the results in the book as well as create your own scripts. The site also offers supplemental code for more advanced analyses and practice exercises for every chapter.
Download or read book Pillars of Evolution written by Douglas W. Morris and published by Oxford University Press (UK). This book was released on 2011-07-14 with total page 282 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides a perspective on adaptive evolution.
Download or read book Sustainable Natural Resource Management written by Daniel R. Lynch and published by Cambridge University Press. This book was released on 2009-03-02 with total page 231 pages. Available in PDF, EPUB and Kindle. Book excerpt: Natural resources support all human productivity. The sustainable management of natural resources is among the preeminent problems of the current century. Sustainability and the implied professional responsibility start here. This book uses applied mathematics familiar to undergraduate engineers and scientists to examine natural resource management and its role in framing sustainability. Renewable and nonrenewable resources are covered, along with living and sterile resources. Examples and applications are drawn from petroleum, fisheries, and water resources. Each chapter contains problems illustrating the material. Simple programs in commonly available packages (Excel, MATLAB) support the text. The material is a natural prelude to more advanced study in ecology, conservation, and population dynamics, as well as engineering and science. The mathematical description is kept within what an undergraduate student in the sciences or engineering would normally be expected to master for natural systems. The purpose is to allow students to confront natural resource problems early in their preparation.
Download or read book Mathematics in Population Biology written by Horst R. Thieme and published by Princeton University Press. This book was released on 2018-06-05 with total page 564 pages. Available in PDF, EPUB and Kindle. Book excerpt: The formulation, analysis, and re-evaluation of mathematical models in population biology has become a valuable source of insight to mathematicians and biologists alike. This book presents an overview and selected sample of these results and ideas, organized by biological theme rather than mathematical concept, with an emphasis on helping the reader develop appropriate modeling skills through use of well-chosen and varied examples. Part I starts with unstructured single species population models, particularly in the framework of continuous time models, then adding the most rudimentary stage structure with variable stage duration. The theme of stage structure in an age-dependent context is developed in Part II, covering demographic concepts, such as life expectation and variance of life length, and their dynamic consequences. In Part III, the author considers the dynamic interplay of host and parasite populations, i.e., the epidemics and endemics of infectious diseases. The theme of stage structure continues here in the analysis of different stages of infection and of age-structure that is instrumental in optimizing vaccination strategies. Each section concludes with exercises, some with solutions, and suggestions for further study. The level of mathematics is relatively modest; a "toolbox" provides a summary of required results in differential equations, integration, and integral equations. In addition, a selection of Maple worksheets is provided. The book provides an authoritative tour through a dazzling ensemble of topics and is both an ideal introduction to the subject and reference for researchers.
Download or read book Introduction to Quantitative Ecology written by Timothy E. Essington and published by Oxford University Press. This book was released on 2021-09-30 with total page 321 pages. Available in PDF, EPUB and Kindle. Book excerpt: Environmental science (ecology, conservation, and resource management) is an increasingly quantitative field. A well-trained ecologist now needs to evaluate evidence generated from complex quantitative methods, and to apply these methods in their own research. Yet the existing books and academic coursework are not adequately serving most of the potential audience - instead they cater to the specialists who wish to focus on either mathematical or statistical aspects, and overwhelmingly appeal to those who already have confidence in their quantitative skills. At the same time, many texts lack an explicit emphasis on the epistemology of quantitative techniques. That is, how do we gain understanding about the real world from models that are so vastly simplified? This accessible textbook introduces quantitative ecology in a manner that aims to confront these limitations and thereby appeal to a far wider audience. It presents material in an informal, approachable, and encouraging manner that welcomes readers with any degree of confidence and prior training. It covers foundational topics in both mathematical and statistical ecology before describing how to implement these concepts to choose, use, and analyse models, providing guidance and worked examples in both spreadsheet format and R. The emphasis throughout is on the skilful interpretation of models to answer questions about the natural world. Introduction to Quantitative Ecology is suitable for advanced undergraduate students and incoming graduate students, seeking to strengthen their understanding of quantitative methods and to apply them successfully to real world ecology, conservation, and resource management scenarios.
Download or read book Biophysical Tools for Biologists written by and published by Academic Press. This book was released on 2009-01-19 with total page 739 pages. Available in PDF, EPUB and Kindle. Book excerpt: Driven in part by the development of genomics, proteomics, and bioinformatics as new disciplines, there has been a tremendous resurgence of interest in physical methods to investigate macromolecular structure and function in the context of living cells. This volume in Methods in Cell Biology is devoted to biophysical techniques in vivo and their applications to cellular biology. Biophysical Tools for Biologists covers methods-oriented chapters on fundamental as well as cutting-edge techniques in molecular and cellular biophysics. This book is directed toward the broad audience of cell biologists, biophysicists, pharmacologists, and molecular biologists who employ classical and modern biophysical technologies or wish to expand their expertise to include such approaches. It will also interest the biomedical and biotechnology communities for biophysical characterization of drug formulations prior to FDA approval. - Describes techniques in the context of important biological problems - Delineates critical steps and potential pitfalls for each method
Download or read book Experimenting on a Small Planet written by William W. Hay and published by Springer. This book was released on 2016-06-01 with total page 834 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is a thorough introduction to climate science and global change. The author is a geologist who has spent much of his life investigating the climate of Earth from a time when it was warm and dinosaurs roamed the land, to today's changing climate. Bill Hay takes you on a journey to understand how the climate system works. He explores how humans are unintentionally conducting a grand uncontrolled experiment which is leading to unanticipated changes. We follow the twisting path of seemingly unrelated discoveries in physics, chemistry, biology, geology, and even mathematics to learn how they led to our present knowledge of how our planet works. He explains why the weather is becoming increasingly chaotic as our planet warms at a rate far faster than at any time in its geologic past. He speculates on possible future outcomes, and suggests that nature itself may make some unexpected course corrections. Although the book is written for the layman with little knowledge of science or mathematics, it includes information from many diverse fields to provide even those actively working in the field of climatology with a broader view of this developing drama. Experimenting on a Small Planet is a must read for anyone having more than a casual interest in global warming and climate change - one of the most important and challenging issues of our time. This new edition includes actual data from climate science into 2014. Numerous powerpoint slides allow lecturers and teachers to more effectively use the book as a basis for climate change education.
