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Book DNA Methylation in Plants

    Book Details:
  • Author : B. F. Vani︠u︡shin
  • Publisher : Nova Science Publishers
  • Release : 2008
  • ISBN : 9781606920510
  • Pages : 0 pages

Download or read book DNA Methylation in Plants written by B. F. Vani︠u︡shin and published by Nova Science Publishers. This book was released on 2008 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: A high degree of nuclear DNA (nDNA) methylation is a specific feature of plant genomes, they do contain 5-methylcytosine (m5C) and N6-methyladenine (m6A). More than 30% m5C is located in CNG sequences. Specific changes in DNA methylation accompany the entire life of a plant starting from seed germination up to the death programmed or induced by various agents and factors of biological or abiotic nature. Modulation of DNA methylation is one of the possible modes of the hormonal action in plant. DNA methylation in plants is species-, tissue-, organelle- and age-specific; it is involved in the control of all genetic functions including transcription, replication, DNA repair, gene transposition and cell differentiation. DNA methylation is engaged in gene silencing and parental imprinting, it controls transgenes and foreign DNA. Plants have much more complicated and sophisticated system of the multi-component and sometimes even conjugated genome (nuclear DNA) methylations compared with animals; besides, unlike animals, they have the plastids with their own unique DNA modification system that may control plastid differentiation and functioning; DNA methylation in plant mitochondria is performed in other fashion compared with it in nuclei. The nuclear DNA methylation system is controlled by three major families of cytosine DNA-methyltransferase genes, at least. In contrast to animals the inactivation of major maintenance methyltransferase MET1 (similar to animal Dnmt1) has no significant consequences for plant survival. Other plant cytosine DNA-methyltransferases have no analogs in animals. Some of them (DRM) are responsible for de novo DNA methylation including asymmetric sequences. Plant gene may be methylated at both adenine and cytosine residues; specific adenine DNA-methyltransferase was described. Adenine DNA methylation may influence cytosine modification and vice versa. Anyway, two different systems of the genome modification based on methylation of adenines and cytosines coexist in higher plants. The specific endonucleases discriminating between methylated and unmethylated DNA are present in plants. Thus, plants may have restriction-modification system. There are peculiar complicated controls for growth and development by DNA methylations in plants; they are well co-ordinated with other epigenetic signals modulating chromatin organisation.

Book DNA Methylation

    Book Details:
  • Author : J. Jost
  • Publisher : Birkhäuser
  • Release : 2013-11-11
  • ISBN : 3034891180
  • Pages : 581 pages

Download or read book DNA Methylation written by J. Jost and published by Birkhäuser. This book was released on 2013-11-11 with total page 581 pages. Available in PDF, EPUB and Kindle. Book excerpt: The occurrence of 5-methylcytosine in DNA was first described in 1948 by Hotchkiss (see first chapter). Recognition of its possible physiologi cal role in eucaryotes was first suggested in 1964 by Srinivasan and Borek (see first chapter). Since then work in a great many laboratories has established both the ubiquity of 5-methylcytosine and the catholicity of its possible regulatory function. The explosive increase in the number of publications dealing with DNA methylation attests to its importance and makes it impossible to write a comprehensive coverage of the literature within the scope of a general review. Since the publication of the 3 most recent books dealing with the subject (DNA methylation by Razin A. , Cedar H. and Riggs A. D. , 1984 Springer Verlag; Molecular Biology of DNA methylation by Adams R. L. P. and Burdon R. H. , 1985 Springer Verlag; Nucleic Acids Methylation, UCLA Symposium suppl. 128, 1989) considerable progress both in the techniques and results has been made in the field of DNA methylation. Thus we asked several authors to write chapters dealing with aspects of DNA methyla tion in which they are experts. This book should be most useful for students, teachers as well as researchers in the field of differentiation and gene regulation. We are most grateful to all our colleagues who were willing to spend much time and effort on the publication of this book. We also want to express our gratitude to Yan Chim Jost for her help in preparing this book.

Book DNA Methylation and Cellular Differentiation

Download or read book DNA Methylation and Cellular Differentiation written by James H. Taylor and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 146 pages. Available in PDF, EPUB and Kindle. Book excerpt: In 1977 I wrote a grant proposal in which I applied to study developmental patterns in enzymatic methylation of DNA in eukaryotes. One part of the proposal was to assay cells at different embryonic developmental stages for maintenance and de novo type methylase activity. With one exception the referees, probably developmental biologists, recommended that the work not be supported because there was no evidence that methylation plays any role in eukaryotic gene regulation. Aside from proving that innovative ideas can seldom be used to successfully compete for grant funds, the skepticism of biologists toward methylation as a regulatory mechanism was, and still is, widespread even among some of those who investigate the problem. That is a healthy situation for all points of view should be brought to bear on a problem of such importance. However, to deny funds to investigate a problem because one has already formed an opinion without evidence is hardly commendable. The great skepticism about the significance of DNA methylation is based in part on the evidence that it is absent or very little used in Drosophila, a favorite organism for genetic and developmental studies. There now remains little doubt that methylation of cytosine in certain CpG sites can strikingly affect the transcription of sequences 3' to the methylated doublet. How this inhibition operates and to what extent it is utilized in cells is still debatable.

Book DNA Methylation

    Book Details:
  • Author : Tatiana Tatarinova
  • Publisher : BoD – Books on Demand
  • Release : 2012-03-16
  • ISBN : 9535103202
  • Pages : 404 pages

Download or read book DNA Methylation written by Tatiana Tatarinova and published by BoD – Books on Demand. This book was released on 2012-03-16 with total page 404 pages. Available in PDF, EPUB and Kindle. Book excerpt: Epigenetics is one of the most exciting and rapidly developing areas of modern genetics with applications in many disciplines from medicine to agriculture. The most common form of epigenetic modification is DNA methylation, which plays a key role in fundamental developmental processes such as embryogenesis and also in the response of organisms to a wide range of environmental stimuli. Indeed, epigenetics is increasing regarded as one of the major mechanisms used by animals and plants to modulate their genome and its expression to adapt to a wide range of environmental factors. This book brings together a group of experts at the cutting edge of research into DNA methylation and highlights recent advances in methodology and knowledge of underlying mechanisms of this most important of genetic processes. The reader will gain an understanding of the impact, significance and recent advances within the field of epigenetics with a focus on DNA methylation.

Book Role of DNA Methyltransferases in the Epigenome

Download or read book Role of DNA Methyltransferases in the Epigenome written by Albert Jeltsch and published by MDPI. This book was released on 2020-03-05 with total page 150 pages. Available in PDF, EPUB and Kindle. Book excerpt: DNA methylation, a modification found in most species, regulates chromatin functions in conjunction with other epigenome modifications, such as histone post-translational modifications and non-coding RNAs. In mammals, DNA methylation has an essential role in development by orchestrating the generation and maintenance of the phenotypic diversity of human cell types. Recent years have brought spectacular advances in our understanding of the mechanism, function and regulation of DNA methyltransferases through their interaction with other epigenome modifications, chromatin factors and post-translational modifications, which are described in this Special Issue of Genes. Manuscripts are specifically addressing describing the targeting and regulation of DNA methyltransferases by interacting factors and their roles in cellular differentiation and the development of diseases. Prof. Dr. Albert Jeltsch and Prof. Dr. Humaira Gowher, Guest Editors

Book Epigenetic Mechanisms of Gene Regulation

Download or read book Epigenetic Mechanisms of Gene Regulation written by Vincenzo E. A. Russo and published by . This book was released on 1996 with total page 716 pages. Available in PDF, EPUB and Kindle. Book excerpt: Many inheritable changes in gene function are not explained by changes in the DNA sequence. Such epigenetic mechanisms are known to influence gene function in most complex organisms and include effects such as transposon function, chromosome imprinting, yeast mating type switching and telomeric silencing. In recent years, epigenetic effects have become a major focus of research activity. This monograph, edited by three well-known biologists from different specialties, is the first to review and synthesize what is known about these effects across all species, particularly from a molecular perspective, and will be of interest to everyone in the fields of molecular biology and genetics.

Book Epigenetics in Plants of Agronomic Importance  Fundamentals and Applications

Download or read book Epigenetics in Plants of Agronomic Importance Fundamentals and Applications written by Raúl Alvarez-Venegas and published by Springer. This book was released on 2014-07-22 with total page 158 pages. Available in PDF, EPUB and Kindle. Book excerpt: Over the past decades, chromatin remodelling has emerged as an important regulator of gene expression and plant defense. This book provides a detailed understanding of the epigenetic mechanisms involved in plants of agronomic importance. The information presented here is significant because it is expected to provide the knowledge needed to develop in the future treatments to manipulate and selectively activate/inhibit proteins and metabolic pathways to counter pathogens, to treat important diseases and to increase crop productivity. New approaches of this kind and the development of new technologies will certainly increase our knowledge of currently known post-translational modifications and facilitate the understanding of their roles in, for example, host-pathogen interactions and crop productivity. Furthermore, we provide important insight on how the plant epigenome changes in response to developmental or environmental stimuli, how chromatin modifications are established and maintained, to which degree they are used throughout the genome, and how chromatin modifications influence each another.

Book Epigenetics in Plants of Agronomic Importance  Fundamentals and Applications

Download or read book Epigenetics in Plants of Agronomic Importance Fundamentals and Applications written by Raúl Alvarez-Venegas and published by Springer. This book was released on 2019-04-26 with total page 415 pages. Available in PDF, EPUB and Kindle. Book excerpt: Over the past few decades, chromatin modulation has emerged as an important regulator of gene expression. This second edition provides detailed information on the epigenetic mechanisms in plants, illustrating the value of this research in plants of agronomic importance. It examines recent advances regarding plants’ epigenetic regulation in response to abiotic and biotic types of stress; the epigenetic basis of plant immunity; evolution and functions of plant histones; epigenetic variation and plant breeding; and epigenome editing and crop improvement. The content is intended to promote the development of future biotechnologies to manipulate and selectively activate/inhibit proteins and metabolic pathways to counter pathogens, to treat important diseases, and to increase crop productivity. The development of new fields, like epigenome editing and RNA epigenetics, will certainly improve our understanding of currently known epigenetic modifications and their roles in e.g. host-pathogen interactions, crop productivity, and in response to environmental stimuli. This volume contains twelve new/revised chapters, written by an international team of experts on plant epigenetics, and addresses the needs of researchers and professionals in the fields of agronomics, crop breeding, epigenetics, plant biochemistry, plant developmental biology, and related disciplines.

Book New Insights into Mechanisms of Epigenetic Modifiers in Plant Growth and Development

Download or read book New Insights into Mechanisms of Epigenetic Modifiers in Plant Growth and Development written by Ming Luo and published by Frontiers Media SA. This book was released on 2020-02-12 with total page 169 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book The Interplay Between Epigenetic Regulation and Other Cellular Processes

Download or read book The Interplay Between Epigenetic Regulation and Other Cellular Processes written by Kai Tang and published by Frontiers Media SA. This book was released on 2021-07-05 with total page 130 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book Epigenetics

    Book Details:
  • Author : Bruce Stillman
  • Publisher : CSHL Press
  • Release : 2004
  • ISBN : 0879697318
  • Pages : 531 pages

Download or read book Epigenetics written by Bruce Stillman and published by CSHL Press. This book was released on 2004 with total page 531 pages. Available in PDF, EPUB and Kindle. Book excerpt: The importance of epigenetic regulation of gene expression, particularly in higher organisms, is now clear and the 2004 Cold Spring Harbor Annual Symposium provided many new examples as well as insights into the underlying mechanisms. The resulting volume—with over 60 papers from experts across the field—covers various aspects of nuclear organization and dynamics; genomic imprinting, chromosomal inactivation, and other examples of gene silencing; the histone and DNA modifications associated with these conditions; and the roles of RNA and protein regulators in establishing and maintaining these states.

Book Environmental Epigenetics

Download or read book Environmental Epigenetics written by L. Joseph Su and published by Springer. This book was released on 2015-05-18 with total page 327 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book examines the toxicological and health implications of environmental epigenetics and provides knowledge through an interdisciplinary approach. Included in this volume are chapters outlining various environmental risk factors such as phthalates and dietary components, life states such as pregnancy and ageing, hormonal and metabolic considerations and specific disease risks such as cancer cardiovascular diseases and other non-communicable diseases. Environmental Epigenetics imparts integrative knowledge of the science of epigenetics and the issues raised in environmental epidemiology. This book is intended to serve both as a reference compendium on environmental epigenetics for scientists in academia, industry and laboratories and as a textbook for graduate level environmental health courses. Environmental Epigenetics imparts integrative knowledge of the science of epigenetics and the issues raised in environmental epidemiology. This book is intended to serve both as a reference compendium on environmental epigenetics for scientists in academia, industry and laboratories and as a textbook for graduate level environmental health courses.

Book Nuclear Functions in Plant Transcription  Signaling and Development

Download or read book Nuclear Functions in Plant Transcription Signaling and Development written by Olga Pontes and published by Springer. This book was released on 2015-06-03 with total page 187 pages. Available in PDF, EPUB and Kindle. Book excerpt: The genome is more than a linear code as depicted by its DNA sequences as several interacting factors play a crucial role in shaping its organization and function. The complete sequences of a number of plant genomes and the recent advances of high-throughput technologies has fueled research efforts in the field of Plant Nuclear Biology unveiling numerous insights about the mechanisms underlying genome regulation. Genomic information is being integrated into molecular- and cellular-level mechanisms of the plant processes. A host of nuclear processes underlie key developmental processes as well as biotic and abiotic interactions. Non-coding RNAs have been increasingly recognized as players in gene expression and genome defense and integrity. However, in vivo, genomes exist as elaborate physical structures, and their functional properties are strongly determined by their cellular organization. Various types of subcellular structure have been identified in the nucleus, which are associated with transcription factors, RNA processing proteins and epigenetic regulators. Interestingly, these nuclear bodies display different behaviors in response to the environment. This book compiles a series of landmark discussions of the recent advances in plant nuclear biology research focusing in the functional relevance of the arrangement of genomes and nuclear processes that impact plant physiology and development.

Book DNA Methylation and Gene Regulation

Download or read book DNA Methylation and Gene Regulation written by Robin Holliday and published by Royal Society (GB). This book was released on 1990 with total page 184 pages. Available in PDF, EPUB and Kindle. Book excerpt: The papers in this volume review and assess the significance of the advances that have been made, by using a variety of experimental systems, concerning the possible importance of DNA methylation in controlling the activity of genes during development.

Book Cellular Ecophysiology of Microbe

Download or read book Cellular Ecophysiology of Microbe written by Tino Krell and published by Springer. This book was released on 2018-03-24 with total page 585 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book assembles concisely written chapters by world-leaders in the field summarizing recent advances in understanding microbial responses to hydrocarbons. Subjects treated include mechanisms of sensing, hydrocarbon tolerance and degradation as well as an overview on hydrophobic modification of biomolecules. Other chapters are dedicated to issues related to the reduced bioavailability of hydrocarbons, which differentiates this class of compounds form many others, but which of central importance to understand the ecophysiological consequences. This book should be standard literature in any laboratory working in this area.