Download or read book Spatial temporal Fish Stock Assessment written by Susan Storey and published by . This book was released on 1998 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book A Comparative Analysis of Fish Stock Assessment Methods written by Xiaoying Deng and published by . This book was released on 2000 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This thesis presents research on an alternative spatial-temporal method of fish stock assessment. We develop a simulation model of spatial-temporal stock analysis and compare its assessment with the common VPA/SPA method. In recent years, fisheries biologists have depended mainly on age structured aggregated sequential population analysis (SPA)/virtual population analysis (VPA) for stock assessment purposes. The VPA method is an aggregate model that consolidates all spatial and within-season temporal stock dynamics into a single total stock estimate. The proposed spatial-temporal method produces historical estimates of population size and fishing mortality rate by age and year. In this thesis, the abundance states of age-aggregated stock components are tracked in space over the course of each season using computer simulation. Data about fish stock spatial-temporal migration dynamics are used to estimate stock abundance in space and time over the course of a fishing season. The spatial-temporal assessment method is applied to the herring stock of the Scotia Fundy region of Atlantic Canada. The dynamics of the herring spawning groups are described and the simulation model is developed for a given season. The results suggest that disaggregated spatial-temporal estimates provide more information for in-season management of herring spawning groups than the traditional aggregate VPA approach.
Download or read book Improving Fish Stock Assessments written by National Research Council and published by National Academies Press. This book was released on 1998-02-27 with total page 194 pages. Available in PDF, EPUB and Kindle. Book excerpt: Ocean harvests have plateaued worldwide and many important commercial stocks have been depleted. This has caused great concern among scientists, fishery managers, the fishing community, and the public. This book evaluates the major models used for estimating the size and structure of marine fish populations (stock assessments) and changes in populations over time. It demonstrates how problems that may occur in fisheries dataâ€"for example underreporting or changes in the likelihood that fish can be caught with a given type of gearâ€"can seriously degrade the quality of stock assessments. The volume makes recommendations for means to improve stock assessments and their use in fishery management.
Download or read book On the Dynamics of Exploited Fish Populations written by Raymond J.H. Beverton and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 541 pages. Available in PDF, EPUB and Kindle. Book excerpt: Among the fishes, a remarkably wide range of biological adaptations to diverse habitats has evolved. As well as living in the conventional habitats of lakes, ponds, rivers, rock pools and the open sea, fish have solved the problems of life in deserts, in the deep sea, in the cold antarctic, and in warm waters of high alkalinity or of low oxygen. Along with these adaptations, we find the most impressive specializations of morphology, physiology and behaviour. For example we can marvel at the high-speed swimming of the marlins, sailfish and warm-blooded tunas, air-breathing in catfish and lungfish, parental care in the mouth-brooding cichlids, and viviparity in many sharks and toothcarps. Moreover, fish are of considerable importance to the survival of the human species in the form of nutritious, delicious and diverse food. Rational exploitation and management of our global stocks of fishes must rely upon a detailed and precise insight of their biology. The Chapman & Hall Fish and Fisheries Series aims to present timely volumes reviewing important aspects of fish biology. Most volumes will be of interest to research workers in biology, zoology, ecology and physiology but an additional aim is for the books to be accessible to a wide spectrum of non-specialist readers ranging from undergraduates and postgraduates to those with an interest in industrial and commercial aspects of fish and fisheries.
Download or read book Stock Assessment for Fishery Management written by Daniel D. Hoggarth and published by Food & Agriculture Org.. This book was released on 2006 with total page 284 pages. Available in PDF, EPUB and Kindle. Book excerpt: This publication contains guidelines for fish stock assessment and fishery management using the software tools and other outputs developed by the UK Department for International Development's Fisheries Management Science Programme (FMSP) from 1992 to 2004. It includes a CD-ROM with the installation files for each of the four FMSP software tools: LFDA (Length Frequency Data Analysis), CEDA (Catch Effort Data Analysis), YIELD and ParFish (Participatory Fisheries Stock Assessment).
Download or read book Joint Species Distribution Modelling written by Otso Ovaskainen and published by Cambridge University Press. This book was released on 2020-06-11 with total page 389 pages. Available in PDF, EPUB and Kindle. Book excerpt: A comprehensive account of joint species distribution modelling, covering statistical analyses in light of modern community ecology theory.
Download or read book Spatial temporal Stock Assessment Analysis with Application to the Scotia Fundy Herring Fishery written by Daniel Lane and published by . This book was released on 2005 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Quantitative Fisheries Stock Assessment written by R. Hilborn and published by Springer Science & Business Media. This book was released on 2013-12-01 with total page 575 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book really began in 1980 with our first microcomputer, an Apple II +. The great value of the Apple II + was that we could take the computer programs we had been building on mainframe and mini-computers, and make them available to the many fisheries biologists who also had Apple II + 's. About 6 months after we got our first Apple, John Glaister came through Vancouver and saw what we were doing and realized that his agency (New South Wales State Fisheries) had the same equipment and could run the same programs. John organized a training course in Australia where we showed about 25 Australian fisheries biologists how to use microcomputers to do many standard fisheries analyses. In the process of organizing this and sub sequent courses we developed a series of lecture notes. Over the last 10 years these notes have evolved into the chapters of this book.
Download or read book Spatio Temporal Models for Ecologists written by James Thorson and published by CRC Press. This book was released on 2024-02-27 with total page 294 pages. Available in PDF, EPUB and Kindle. Book excerpt: Ecological dynamics are tremendously complicated and are studied at a variety of spatial and temporal scales. Ecologists often simplify analysis by describing changes in density of individuals across a landscape, and statistical methods are advancing rapidly for studying spatio-temporal dynamics. However, spatio-temporal statistics is often presented using a set of principles that may seem very distant from ecological theory or practice. This book seeks to introduce a minimal set of principles and numerical techniques for spatio-temporal statistics that can be used to implement a wide range of real-world ecological analyses regarding animal movement, population dynamics, community composition, causal attribution, and spatial dynamics. We provide a step-by-step illustration of techniques that combine core spatial-analysis packages in R with low-level computation using Template Model Builder. Techniques are showcased using real-world data from varied ecological systems, providing a toolset for hierarchical modelling of spatio-temporal processes. Spatio-Temporal Models for Ecologists is meant for graduate level students, alongside applied and academic ecologists. Key Features: Foundational ecological principles and analyses Thoughtful and thorough ecological examples Analyses conducted using a minimal toolbox and fast computation Code using R and TMB included in the book and available online
Download or read book Quantitative Fish Dynamics written by Terrance J. Quinn and published by Oxford University Press, USA. This book was released on 1999 with total page 561 pages. Available in PDF, EPUB and Kindle. Book excerpt: The fields of fish population dynamics and stock assessment have seen major advances in the 1980s and 1990s, creating the need for a new synthesis. This text attempts that synthesis by presenting a contemporary approach for quantitative fisheries science that incorporates modern statistical and mathematical techniques. It emphasizes the link between biology and theory by explaining the assumptions inherent in the quantitative methods and models. The book covers key topics that are often overlooked in other texts, such as optimal harvesting, migratory stocks, and complex age and size-structured models. Quantitative Fish Dynamics is an ideal textbook for graduate and undergraduate courses in fish population dynamics and stock assessment. It is an indispensable reference work for fisheries scientists and others interested in conservation biology, fish and wildlife management, population ecology, and statistical applications.
Download or read book The Spatial Dimensions of Fisheries written by Kotaro Ono and published by . This book was released on 2014 with total page 165 pages. Available in PDF, EPUB and Kindle. Book excerpt: Until relatively recently, fisheries resources were managed as single homogeneous units and fisheries management conveniently ignored the presence of spatial heterogeneity in stocks. In nature, species are neither distributed at random nor uniformly, but follow some pattern created by a combination of habitat preference, movement, interspecific species interactions, and fishery exploitation. Ignoring such heterogeneity and managing stocks as single homogeneous units increases the risk of serial depletion and population collapse. It is therefore important to understand and consider the spatial dynamics of a fishery and fish populations to help establish proper management plans which aid the conservation of marine ecosystems. In this dissertation, I developed and tested novel fishery analysis methods which better integrate the spatial structure of fish and fishermen to help improve the quality of information used for fisheries management. In the first chapter, I developed a multispecies fishery model and examined how the spatial overlap of species could affect the biological and economic performance of commonly used fishery management methods such as the individual quota systems or marine protected areas. In Chapter 2, I examined how the use of spatial closures affected the analysis of fishery catch per unit effort (CPUE) data, which can be used to derive indices of population abundance. From this work, I proposed a new method based on data imputation to reduce bias in the indices of abundance. In Chapter 3, I presented an intuitive but objective way to define spatial strata (using a clustering approach) for analyzing CPUE data, and showed how this method can improve the accuracy of population abundance estimates. Finally, in the last chapter, I applied a novel spatiotemporal statistical model to three large geo-referenced time-series (habitat maps, survey-based fish density estimates and fishery catch data) to study the seasonal dynamics (between Summer and Fall) of a commercially important flatfish species, Pacific Dover sole (Microstomus pacificus), off the U.S. West Coast. The multispecies modeling confirmed that the spatial overlap of species affects both the biological and economic performance of a fishery management system in a complex manner. The presence of a spatial closure increased the amount of bias in the derived index of abundance, however the imputation based method was able to reduce bias for most cases. Furthermore, clustering based area stratification eliminated bias in the derived index of abundance due to selective fishing but was not able to reduce bias when fishing grounds were shifting over time. Finally, the spatio-temporal model applied to Pacific Dover sole revealed that seasonal dynamics (between Summer and Fall) were dominated by movement. In summary, the inclusion of spatial information in fishery models improved the accuracy of species distribution models, the accuracy of abundance indices used in stock assessment models, and provide insight to managers regarding what to expect in terms of population preservation and fishery profitability by switching management methods. Future studies should keep developing methods to improve the use of spatial information into fisheries stock assessment and management.
Download or read book Using R for Modelling and Quantitative Methods in Fisheries written by Malcolm Haddon and published by CRC Press. This book was released on 2020-08-27 with total page 295 pages. Available in PDF, EPUB and Kindle. Book excerpt: Using R for Modelling and Quantitative Methods in Fisheries has evolved and been adapted from an earlier book by the same author and provides a detailed introduction to analytical methods commonly used by fishery scientists, ecologists, and advanced students using the open-source software R as a programming tool. Some knowledge of R is assumed, as this is a book about using R, but an introduction to the development and working of functions, and how one can explore the contents of R functions and packages, is provided. The example analyses proceed step-by-step using code listed in the book and from the book’s companion R package, MQMF, available from GitHub and the standard archive, CRAN. The examples are designed to be simple to modify so the reader can quickly adapt the methods described to use with their own data. A primary aim of the book is to be a useful resource to natural resource practitioners and students. Featured Chapters: Model Parameter Estimation provides a detailed explanation of the requirements and steps involved in fitting models to data, using R and, mainly, maximum likelihood methods. On Uncertainty uses R to implement bootstrapping, likelihood profiles, asymptotic errors, and Bayesian posteriors to characterize any uncertainty in an analysis. The use of the Monte Carlo Markov Chain methodology is examined in some detail. Surplus Production Models applies all the methods examined in the earlier parts of the book to conducting a stock assessment. This included fitting alternative models to the available data, characterizing the uncertainty in different ways, and projecting the optimum models forward in time as the basis for providing useful management advice.
Download or read book Neural Networks with R written by Giuseppe Ciaburro and published by Packt Publishing Ltd. This book was released on 2017-09-27 with total page 264 pages. Available in PDF, EPUB and Kindle. Book excerpt: Uncover the power of artificial neural networks by implementing them through R code. About This Book Develop a strong background in neural networks with R, to implement them in your applications Build smart systems using the power of deep learning Real-world case studies to illustrate the power of neural network models Who This Book Is For This book is intended for anyone who has a statistical background with knowledge in R and wants to work with neural networks to get better results from complex data. If you are interested in artificial intelligence and deep learning and you want to level up, then this book is what you need! What You Will Learn Set up R packages for neural networks and deep learning Understand the core concepts of artificial neural networks Understand neurons, perceptrons, bias, weights, and activation functions Implement supervised and unsupervised machine learning in R for neural networks Predict and classify data automatically using neural networks Evaluate and fine-tune the models you build. In Detail Neural networks are one of the most fascinating machine learning models for solving complex computational problems efficiently. Neural networks are used to solve wide range of problems in different areas of AI and machine learning. This book explains the niche aspects of neural networking and provides you with foundation to get started with advanced topics. The book begins with neural network design using the neural net package, then you'll build a solid foundation knowledge of how a neural network learns from data, and the principles behind it. This book covers various types of neural network including recurrent neural networks and convoluted neural networks. You will not only learn how to train neural networks, but will also explore generalization of these networks. Later we will delve into combining different neural network models and work with the real-world use cases. By the end of this book, you will learn to implement neural network models in your applications with the help of practical examples in the book. Style and approach A step-by-step guide filled with real-world practical examples.
Download or read book Stock Assessment written by Vincent F. Gallucci and published by CRC Press. This book was released on 2023-05-31 with total page 538 pages. Available in PDF, EPUB and Kindle. Book excerpt: Stock Assessment: Quantitative Methods and Applications for Small Scale Fisheries is a book about stock assessment as it is practiced. It focuses on applications for small scale or artisanal fisheries in developing countries, however it is not limited in applicability to tropical waters and should also be considered a resource for students of temperate fishery management problems. It incorporates a careful sample design, various mathematical models as a basis for predicting consequences for stock exploitation, and discusses the impact of exploitation on non-targeted species. This was a unique concept involving a collaborative effort between U.S. and host country scientists to address issues of regional and global concern through innovative research. Unlike other books on stock assessment that show mathematical models, this is the only book of its kind that discusses how an assessment is carried out. It looks at the field as a whole and includes sampling, age determination and acoustics. The book represents the culmination of a nine-year program financed by the United States Agency for International Development to provide new or improved methods of stock assessment for artisanal fisheries.
Download or read book Marine Protected Areas written by National Research Council and published by National Academies Press. This book was released on 2001-06-01 with total page 289 pages. Available in PDF, EPUB and Kindle. Book excerpt: Although the ocean-and the resources within-seem limitless, there is clear evidence that human impacts such as overfishing, habitat destruction, and pollution disrupt marine ecosystems and threaten the long-term productivity of the seas. Declining yields in many fisheries and decay of treasured marine habitats, such as coral reefs, has heightened interest in establishing a comprehensive system of marine protected areas (MPAs)-areas designated for special protection to enhance the management of marine resources. Therefore, there is an urgent need to evaluate how MPAs can be employed in the United States and internationally as tools to support specific conservation needs of marine and coastal waters. Marine Protected Areas compares conventional management of marine resources with proposals to augment these management strategies with a system of protected areas. The volume argues that implementation of MPAs should be incremental and adaptive, through the design of areas not only to conserve resources, but also to help us learn how to manage marine species more effectively.
Download or read book Fish Population Dynamics Monitoring and Management written by Ichiro Aoki and published by Springer. This book was released on 2018-05-22 with total page 248 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book explores how we can solve the urgent problem of optimizing the use of variable, uncertain but finite fisheries resources while maintaining sustainability from a marine-ecosystem conservation perspective. It offers readers a broad understanding of the current methods and theory for sustainable exploitation of fisheries resources, and introduces recent findings and technological developments. The book is divided into three parts: Part I discusses fish stock dynamics, and illustrates how ecological processes affecting life cycles and biological interactions in marine environments lead to fish stock variability in space and time in major fish groups; small pelagic fish, demersal fish and large predatory fish. These insights shed light on the mechanisms underlying the variability in fish stocks and form the essential biological basis for fisheries management. Part II addresses the technologies and systems that monitor changes in fisheries resources and marine ecosystems using two approaches: fishery-dependent and fishery-independent data. It also describes acoustic surveys and biological sampling, as well as stock assessment methods. Part III examines management models for effectively assessing the natural variability in fisheries resources. The authors explore ways of determining the allowable catch in response to changes in stock abundance and how to incorporate ecological processes and monitoring procedures into management models. This book offers readers a broad understanding of sustainable exploitation as well as insights into fisheries management for the next generation.
Download or read book Sustaining Marine Fisheries written by National Research Council and published by National Academies Press. This book was released on 1999-03-19 with total page 189 pages. Available in PDF, EPUB and Kindle. Book excerpt: Fluctuations and declines in marine fish populations have caused growing concern among marine scientists, fisheries managers, commercial and recreational fishers, and the public. Sustaining Marine Fisheries explores the nature of marine ecosystems and the complex interacting factors that shape their productivity. The book documents the condition of marine fisheries today, highlighting species and geographic areas that are under particular stress. Challenges to achieving sustainability are discussed, and shortcomings of existing fisheries management and regulation are examined. The volume calls for fisheries management to adopt a broader ecosystem perspective that encompasses all relevant environmental and human influences. Sustaining Marine Fisheries offers new approaches to building workable fisheries management institutions, improving scientific data, and developing management tools. The book recommends ways to change current practices that encourage overexploitation of fish resources. It will be of special interest to marine policymakers and ecologists, fisheries regulators and managers, fisheries scientists and marine ecologists, fishers, and concerned individuals.
