Download or read book Parallel R written by Q. Ethan McCallum and published by "O'Reilly Media, Inc.". This book was released on 2011-10-21 with total page 123 pages. Available in PDF, EPUB and Kindle. Book excerpt: It’s tough to argue with R as a high-quality, cross-platform, open source statistical software product—unless you’re in the business of crunching Big Data. This concise book introduces you to several strategies for using R to analyze large datasets, including three chapters on using R and Hadoop together. You’ll learn the basics of Snow, Multicore, Parallel, Segue, RHIPE, and Hadoop Streaming, including how to find them, how to use them, when they work well, and when they don’t. With these packages, you can overcome R’s single-threaded nature by spreading work across multiple CPUs, or offloading work to multiple machines to address R’s memory barrier. Snow: works well in a traditional cluster environment Multicore: popular for multiprocessor and multicore computers Parallel: part of the upcoming R 2.14.0 release R+Hadoop: provides low-level access to a popular form of cluster computing RHIPE: uses Hadoop’s power with R’s language and interactive shell Segue: lets you use Elastic MapReduce as a backend for lapply-style operations

Download or read book Parallel R written by Ethan McCallum and published by "O'Reilly Media, Inc.". This book was released on 2011-10-28 with total page 123 pages. Available in PDF, EPUB and Kindle. Book excerpt: R is a wonderful thing, indeed: in recent years this free, open-source product has become a popular toolkit for statistical analysis and programming. Two of R's limitations -- that it is single-threaded and memory-bound -- become especially troublesome in the current era of large-scale data analysis. It's possible to break past these boundaries by putting R on the parallel path. Parallel R will describe how to give R parallel muscle. Coverage will include stalwarts such as snow and multicore, and also newer techniques such as Hadoop and Amazon's cloud computing platform.

Download or read book Parallel Computing for Data Science written by Norman Matloff and published by CRC Press. This book was released on 2015-06-04 with total page 340 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is one of the first parallel computing books to focus exclusively on parallel data structures, algorithms, software tools, and applications in data science. The book prepares readers to write effective parallel code in various languages and learn more about different R packages and other tools. It covers the classic n observations, p variables matrix format and common data structures. Many examples illustrate the range of issues encountered in parallel programming.

Download or read book R Programming for Data Science written by Roger D. Peng and published by . This book was released on 2012-04-19 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Data science has taken the world by storm. Every field of study and area of business has been affected as people increasingly realize the value of the incredible quantities of data being generated. But to extract value from those data, one needs to be trained in the proper data science skills. The R programming language has become the de facto programming language for data science. Its flexibility, power, sophistication, and expressiveness have made it an invaluable tool for data scientists around the world. This book is about the fundamentals of R programming. You will get started with the basics of the language, learn how to manipulate datasets, how to write functions, and how to debug and optimize code. With the fundamentals provided in this book, you will have a solid foundation on which to build your data science toolbox.

Download or read book Mastering Parallel Programming with R written by Simon R. Chapple and published by Packt Publishing Ltd. This book was released on 2016-05-31 with total page 244 pages. Available in PDF, EPUB and Kindle. Book excerpt: Master the robust features of R parallel programming to accelerate your data science computations About This Book Create R programs that exploit the computational capability of your cloud platforms and computers to the fullest Become an expert in writing the most efficient and highest performance parallel algorithms in R Get to grips with the concept of parallelism to accelerate your existing R programs Who This Book Is For This book is for R programmers who want to step beyond its inherent single-threaded and restricted memory limitations and learn how to implement highly accelerated and scalable algorithms that are a necessity for the performant processing of Big Data. No previous knowledge of parallelism is required. This book also provides for the more advanced technical programmer seeking to go beyond high level parallel frameworks. What You Will Learn Create and structure efficient load-balanced parallel computation in R, using R's built-in parallel package Deploy and utilize cloud-based parallel infrastructure from R, including launching a distributed computation on Hadoop running on Amazon Web Services (AWS) Get accustomed to parallel efficiency, and apply simple techniques to benchmark, measure speed and target improvement in your own code Develop complex parallel processing algorithms with the standard Message Passing Interface (MPI) using RMPI, pbdMPI, and SPRINT packages Build and extend a parallel R package (SPRINT) with your own MPI-based routines Implement accelerated numerical functions in R utilizing the vector processing capability of your Graphics Processing Unit (GPU) with OpenCL Understand parallel programming pitfalls, such as deadlock and numerical instability, and the approaches to handle and avoid them Build a task farm master-worker, spatial grid, and hybrid parallel R programs In Detail R is one of the most popular programming languages used in data science. Applying R to big data and complex analytic tasks requires the harnessing of scalable compute resources. Mastering Parallel Programming with R presents a comprehensive and practical treatise on how to build highly scalable and efficient algorithms in R. It will teach you a variety of parallelization techniques, from simple use of R's built-in parallel package versions of lapply(), to high-level AWS cloud-based Hadoop and Apache Spark frameworks. It will also teach you low level scalable parallel programming using RMPI and pbdMPI for message passing, applicable to clusters and supercomputers, and how to exploit thousand-fold simple processor GPUs through ROpenCL. By the end of the book, you will understand the factors that influence parallel efficiency, including assessing code performance and implementing load balancing; pitfalls to avoid, including deadlock and numerical instability issues; how to structure your code and data for the most appropriate type of parallelism for your problem domain; and how to extract the maximum performance from your R code running on a variety of computer systems. Style and approach This book leads you chapter by chapter from the easy to more complex forms of parallelism. The author's insights are presented through clear practical examples applied to a range of different problems, with comprehensive reference information for each of the R packages employed. The book can be read from start to finish, or by dipping in chapter by chapter, as each chapter describes a specific parallel approach and technology, so can be read as a standalone.

Download or read book A Tour of Data Science written by Nailong Zhang and published by CRC Press. This book was released on 2020-11-11 with total page 217 pages. Available in PDF, EPUB and Kindle. Book excerpt: A Tour of Data Science: Learn R and Python in Parallel covers the fundamentals of data science, including programming, statistics, optimization, and machine learning in a single short book. It does not cover everything, but rather, teaches the key concepts and topics in Data Science. It also covers two of the most popular programming languages used in Data Science, R and Python, in one source. Key features: Allows you to learn R and Python in parallel Cover statistics, programming, optimization and predictive modelling, and the popular data manipulation tools – data.table and pandas Provides a concise and accessible presentation Includes machine learning algorithms implemented from scratch, linear regression, lasso, ridge, logistic regression, gradient boosting trees, etc. Appealing to data scientists, statisticians, quantitative analysts, and others who want to learn programming with R and Python from a data science perspective.

Download or read book Parallel Algorithms for Matrix Computations written by K. Gallivan and published by SIAM. This book was released on 1990-01-01 with total page 207 pages. Available in PDF, EPUB and Kindle. Book excerpt: Describes a selection of important parallel algorithms for matrix computations. Reviews the current status and provides an overall perspective of parallel algorithms for solving problems arising in the major areas of numerical linear algebra, including (1) direct solution of dense, structured, or sparse linear systems, (2) dense or structured least squares computations, (3) dense or structured eigenvaluen and singular value computations, and (4) rapid elliptic solvers. The book emphasizes computational primitives whose efficient execution on parallel and vector computers is essential to obtain high performance algorithms. Consists of two comprehensive survey papers on important parallel algorithms for solving problems arising in the major areas of numerical linear algebra--direct solution of linear systems, least squares computations, eigenvalue and singular value computations, and rapid elliptic solvers, plus an extensive up-to-date bibliography (2,000 items) on related research.

Download or read book Using OpenMP written by Barbara Chapman and published by MIT Press. This book was released on 2007-10-12 with total page 378 pages. Available in PDF, EPUB and Kindle. Book excerpt: A comprehensive overview of OpenMP, the standard application programming interface for shared memory parallel computing—a reference for students and professionals. "I hope that readers will learn to use the full expressibility and power of OpenMP. This book should provide an excellent introduction to beginners, and the performance section should help those with some experience who want to push OpenMP to its limits." —from the foreword by David J. Kuck, Intel Fellow, Software and Solutions Group, and Director, Parallel and Distributed Solutions, Intel Corporation OpenMP, a portable programming interface for shared memory parallel computers, was adopted as an informal standard in 1997 by computer scientists who wanted a unified model on which to base programs for shared memory systems. OpenMP is now used by many software developers; it offers significant advantages over both hand-threading and MPI. Using OpenMP offers a comprehensive introduction to parallel programming concepts and a detailed overview of OpenMP. Using OpenMP discusses hardware developments, describes where OpenMP is applicable, and compares OpenMP to other programming interfaces for shared and distributed memory parallel architectures. It introduces the individual features of OpenMP, provides many source code examples that demonstrate the use and functionality of the language constructs, and offers tips on writing an efficient OpenMP program. It describes how to use OpenMP in full-scale applications to achieve high performance on large-scale architectures, discussing several case studies in detail, and offers in-depth troubleshooting advice. It explains how OpenMP is translated into explicitly multithreaded code, providing a valuable behind-the-scenes account of OpenMP program performance. Finally, Using OpenMP considers trends likely to influence OpenMP development, offering a glimpse of the possibilities of a future OpenMP 3.0 from the vantage point of the current OpenMP 2.5. With multicore computer use increasing, the need for a comprehensive introduction and overview of the standard interface is clear. Using OpenMP provides an essential reference not only for students at both undergraduate and graduate levels but also for professionals who intend to parallelize existing codes or develop new parallel programs for shared memory computer architectures.

Download or read book Shared Memory Application Programming written by Victor Alessandrini and published by Morgan Kaufmann. This book was released on 2015-11-06 with total page 557 pages. Available in PDF, EPUB and Kindle. Book excerpt: Shared Memory Application Programming presents the key concepts and applications of parallel programming, in an accessible and engaging style applicable to developers across many domains. Multithreaded programming is today a core technology, at the basis of all software development projects in any branch of applied computer science. This book guides readers to develop insights about threaded programming and introduces two popular platforms for multicore development: OpenMP and Intel Threading Building Blocks (TBB). Author Victor Alessandrini leverages his rich experience to explain each platform's design strategies, analyzing the focus and strengths underlying their often complementary capabilities, as well as their interoperability. The book is divided into two parts: the first develops the essential concepts of thread management and synchronization, discussing the way they are implemented in native multithreading libraries (Windows threads, Pthreads) as well as in the modern C++11 threads standard. The second provides an in-depth discussion of TBB and OpenMP including the latest features in OpenMP 4.0 extensions to ensure readers' skills are fully up to date. Focus progressively shifts from traditional thread parallelism to modern task parallelism deployed by modern programming environments. Several chapter include examples drawn from a variety of disciplines, including molecular dynamics and image processing, with full source code and a software library incorporating a number of utilities that readers can adapt into their own projects. - Designed to introduce threading and multicore programming to teach modern coding strategies for developers in applied computing - Leverages author Victor Alessandrini's rich experience to explain each platform's design strategies, analyzing the focus and strengths underlying their often complementary capabilities, as well as their interoperability - Includes complete, up-to-date discussions of OpenMP 4.0 and TBB - Based on the author's training sessions, including information on source code and software libraries which can be repurposed

Download or read book Advanced R written by Hadley Wickham and published by CRC Press. This book was released on 2015-09-15 with total page 669 pages. Available in PDF, EPUB and Kindle. Book excerpt: An Essential Reference for Intermediate and Advanced R Programmers Advanced R presents useful tools and techniques for attacking many types of R programming problems, helping you avoid mistakes and dead ends. With more than ten years of experience programming in R, the author illustrates the elegance, beauty, and flexibility at the heart of R. The book develops the necessary skills to produce quality code that can be used in a variety of circumstances. You will learn: The fundamentals of R, including standard data types and functions Functional programming as a useful framework for solving wide classes of problems The positives and negatives of metaprogramming How to write fast, memory-efficient code This book not only helps current R users become R programmers but also shows existing programmers what’s special about R. Intermediate R programmers can dive deeper into R and learn new strategies for solving diverse problems while programmers from other languages can learn the details of R and understand why R works the way it does.

Download or read book CompTIA A r Certification All in One For Dummies r written by Glen E. Clarke and published by John Wiley & Sons. This book was released on 2016-08-01 with total page 2564 pages. Available in PDF, EPUB and Kindle. Book excerpt: Some copies of A+ Certification All-in-One For Dummies (9781119255710) were printed without access codes to the online test bank. If you did not receive a PIN with your book, please visit www.dummies.com/go/getaccess to request one. All the knowledge you need to pass the new A+ exam A+ is the gateway certification into many IT careers and can be essential in order to start your occupation off on the right foot in the exciting and rapidly expanding field of information technology. Luckily, the 9 minibooks in CompTIA A+ Certification All-in-One For Dummies make it easier to prepare for this all-important exam so you can pass with flying colors! It quickly and easily gets you up to speed on everything from networking and computer repair to troubleshooting, security, permissions, customer service—and everything in between. The CompTIA A+ test is a rigorous exam, but the experts who wrote this book know exactly what you need to understand in order to help you reach your certification goal. Fully updated for the latest revision of the exam, this comprehensive guide covers the domains of the exam in detail, reflecting the enhanced emphasis on hardware and new Windows content, as well as the nuts and bolts, like operating system basics, recovering systems, securing systems, and more. • Find new content on Windows 8, Mac OS X, Linux, and mobile devices • Get test-taking advice for the big day • Prepare for the A+ exam with a review of the types of questions you'll see on the actual test • Use the online test bank to gauge your knowledge—and find out where you need more study help With the help of this friendly, hands-on guide, you'll learn everything necessary to pass the test, and more importantly, to succeed in your job!

Download or read book Introduction to Parallel Computing written by Vipin Kumar and published by Addison Wesley Longman. This book was released on 1994 with total page 632 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mathematics of Computing -- Parallelism.

Download or read book Data Science in R written by Deborah Nolan and published by CRC Press. This book was released on 2015-04-21 with total page 767 pages. Available in PDF, EPUB and Kindle. Book excerpt: Effectively Access, Transform, Manipulate, Visualize, and Reason about Data and ComputationData Science in R: A Case Studies Approach to Computational Reasoning and Problem Solving illustrates the details involved in solving real computational problems encountered in data analysis. It reveals the dynamic and iterative process by which data analysts

Download or read book Plastics for Flight Vehicles written by Forest Products Laboratory (U.S.) and published by . This book was released on 1960 with total page 240 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Efficient R Programming written by Colin Gillespie and published by "O'Reilly Media, Inc.". This book was released on 2016-12-08 with total page 242 pages. Available in PDF, EPUB and Kindle. Book excerpt: There are many excellent R resources for visualization, data science, and package development. Hundreds of scattered vignettes, web pages, and forums explain how to use R in particular domains. But little has been written on how to simply make R work effectively—until now. This hands-on book teaches novices and experienced R users how to write efficient R code. Drawing on years of experience teaching R courses, authors Colin Gillespie and Robin Lovelace provide practical advice on a range of topics—from optimizing the set-up of RStudio to leveraging C++—that make this book a useful addition to any R user’s bookshelf. Academics, business users, and programmers from a wide range of backgrounds stand to benefit from the guidance in Efficient R Programming. Get advice for setting up an R programming environment Explore general programming concepts and R coding techniques Understand the ingredients of an efficient R workflow Learn how to efficiently read and write data in R Dive into data carpentry—the vital skill for cleaning raw data Optimize your code with profiling, standard tricks, and other methods Determine your hardware capabilities for handling R computation Maximize the benefits of collaborative R programming Accelerate your transition from R hacker to R programmer

Download or read book R for Data Science written by Hadley Wickham and published by "O'Reilly Media, Inc.". This book was released on 2016-12-12 with total page 521 pages. Available in PDF, EPUB and Kindle. Book excerpt: Learn how to use R to turn raw data into insight, knowledge, and understanding. This book introduces you to R, RStudio, and the tidyverse, a collection of R packages designed to work together to make data science fast, fluent, and fun. Suitable for readers with no previous programming experience, R for Data Science is designed to get you doing data science as quickly as possible. Authors Hadley Wickham and Garrett Grolemund guide you through the steps of importing, wrangling, exploring, and modeling your data and communicating the results. You'll get a complete, big-picture understanding of the data science cycle, along with basic tools you need to manage the details. Each section of the book is paired with exercises to help you practice what you've learned along the way. You'll learn how to: Wrangle—transform your datasets into a form convenient for analysis Program—learn powerful R tools for solving data problems with greater clarity and ease Explore—examine your data, generate hypotheses, and quickly test them Model—provide a low-dimensional summary that captures true "signals" in your dataset Communicate—learn R Markdown for integrating prose, code, and results

Download or read book Biomarkers Precision Nutrition in Chronic Diseases written by Yulong Li and published by Frontiers Media SA. This book was released on 2023-08-15 with total page 344 pages. Available in PDF, EPUB and Kindle. Book excerpt: Chronic diseases such as obesity, diabetes, and cardiovascular disease are major causes of morbidity and mortality worldwide with increasing prevalence in all age groups, genders, and ethnicities. Emerging evidence suggests that precision nutrition plays a pivotal role in the prevention and management of chronic diseases and has been recognized as a key focus for the next ten years of health research. Currently, one of the major challenges in precision nutrition is the valid and reliable assessment of foods and nutrients intake, especially whole foods (e.g., fermented foods) and macromolecules (e.g., polysaccharides), as well as their impact on host health and disease. Strong evidence has supported that the biomarkers (e.g., metabolites) as an intermediate bridge can effectively link precision nutrition and chronic diseases, which can contribute to objectively assessing food consumption and precisely determining the biological effects of complex foods (ingredients). However, still we are at the very beginning to understand how precision nutrition regulates biomarkers to prevent chronic diseases with individual differences. The molecular mechanisms of key biomarkers in chronic diseases have not been fully elucidated and extensive studies are crucially warranted.