Download or read book Omics for Environmental Engineering and Microbiology Systems written by Vineet Kumar and published by CRC Press. This book was released on 2022-11-07 with total page 630 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bioremediation using microbes is a sustainable technology for biodegradation of target compounds, and an omics approach gives more clarity on these microbial communities. This book provides insights into the complex behavior of microbial communities and identifies enzymes/metabolites and their degradation pathways. It describes the application of microbes and their derivatives for the bioremediation of potentially toxic and novel compounds. It highlights the existing technologies along with industrial practices and real-life case studies. Features: Includes recent research and development in the areas of omics and microbial bioremediation. Covers the broad environmental pollution control approaches such as metagenomics, metabolomics, fluxomics, bioremediation, and biodegradation of industrial wastes. Reviews metagenomics and waste management, and recycling for environmental cleanup. Describes the metagenomic methodologies and best practices, from sample collection to data analysis for taxonomies. Explores various microbial degradation pathways and detoxification mechanisms for organic and inorganic contaminants of wastewater with their gene expression. This book is aimed at graduate students and researchers in environmental engineering, soil remediation, hazardous waste management, environmental modeling, and wastewater treatment.

Download or read book Omics Technologies and Bio engineering written by Debmalya Barh and published by Academic Press. This book was released on 2017-12-01 with total page 645 pages. Available in PDF, EPUB and Kindle. Book excerpt: Omics Technologies and Bio-Engineering: Towards Improving Quality of Life, Volume 1 is a unique reference that brings together multiple perspectives on omics research, providing in-depth analysis and insights from an international team of authors. The book delivers pivotal information that will inform and improve medical and biological research by helping readers gain more direct access to analytic data, an increased understanding on data evaluation, and a comprehensive picture on how to use omics data in molecular biology, biotechnology and human health care. Covers various aspects of biotechnology and bio-engineering using omics technologies Focuses on the latest developments in the field, including biofuel technologies Provides key insights into omics approaches in personalized and precision medicine Provides a complete picture on how one can utilize omics data in molecular biology, biotechnology and human health care

Download or read book Environmental Microbiology for Engineers written by Volodymyr Ivanov and published by CRC Press. This book was released on 2016-04-19 with total page 438 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book enables engineering students to understand how microbiology can be applied to environmental research and practical applications. Written specifically for senior undergraduate to graduate level civil and environmental engineering students, the textbook encompasses both fundamental and applied principles and covers topics such as the microbiology of water, wastewater, soil, and air biotreatment systems used in environmental engineering. It also covers civil engineering topics such as biocementation, biocorrosion, biofouling and biodeterioration of materials. Suitable for environmental engineers with little to no biology training, this book provides a thoroughly up-to-date introduction to current trends in environmental microbiology and engineering. Microbial classification is represented as a periodic table with theoretical connections between all prokaryotic groups and highlighting their environmental applications. The textbook includes quizzes for each chapter, tutorials and exam questions. A separate solutions manual is available with qualifying course adoption. Combining microbiological knowledge and environmental biotechnology principles in a readable fashion, the book includes topics such as Structures and functions of microbial cell and cell aggregates Applied microbial genetics and molecular biology Diversity and function of microorganisms in environmental engineering systems Environmental bioengineering processes Microbiological monitoring of environmental engineering systems Microbiology of water and wastewater treatment Biocementation and bioc1ogging of soil Biocorrosion of constructions Biodeterioration of materials Biopollution of indoor environment Bioremediation and biotransformation of solid waste and soil Ancillary Instructional Material: Quiz and Exam Bank As an instructor and an active participant in the environmental and civil engineering community, the author has recognized the need for field-specific microbiology instructional material, and has constructed a concise, relevant text for both students and professionals.

Download or read book Omics Insights in Environmental Bioremediation written by Vineet Kumar and published by Springer Nature. This book was released on 2022-09-26 with total page 706 pages. Available in PDF, EPUB and Kindle. Book excerpt: Environmental pollution emanating from rapid industrialization, population growth, and urbanization has been considered a major problem in recent years that affects biodiversity, ecosystems, and human health by contaminating soil and water. This book brings out a comprehensive collection of information on valuable insights into different cutting-edge omics technologies, such as metagenomics, metatranscriptomics, metaproteomics, and metabolomics, along with advanced next-generation sequencing technologies as well as bioinformatic tools, which led to a better understanding of microbial communities and their adaptability to a wide range of contaminants and underlying their mechanisms in bioremediation and biodegradation of environmental pollutants. In addition, this edited volume provides critical insight into of potent microbial communities endowed with unique functional attributes through their unique metabolism catalyzed by ‘signature’ enzymes and degradation pathways. Step-by-step descriptions are provided of various microbial metabolic pathways of degradation and biotransformation of environmental contaminants by numerous illustrations which make the information easier to understand for the readers. Each chapter is devoted to selected examples of microbial bioremediation supported by tables, and an extensive list of references for readers interested in learning further details about the subject matter. This book is of interest to teachers, researchers to professionals, policymakers, stockholders, practitioners, environmental engineers, soil scientists, and policymakers. In addition, the book serves as additional comprehensive material for undergraduate, graduate, and doctoral students who require a working knowledge and knowhow of ‘Omics’ involved in and required for environmental remediation of legacy and emerging contaminants, will also find this to be a useful read.

Download or read book OMICS written by Debmalya Barh and published by CRC Press. This book was released on 2013-03-26 with total page 721 pages. Available in PDF, EPUB and Kindle. Book excerpt: With the advent of new technologies and acquired knowledge, the number of fields in omics and their applications in diverse areas are rapidly increasing in the postgenomics era. Such emerging fields—including pharmacogenomics, toxicogenomics, regulomics, spliceomics, metagenomics, and environomics—present budding solutions to combat global challenges in biomedicine, agriculture, and the environment. OMICS: Applications in Biomedical, Agricultural, and Environmental Sciences provides valuable insights into the applications of modern omics technologies to real-world problems in the life sciences. Filling a gap in the literature, it offers a broad, multidisciplinary view of current and emerging applications of omics in a single volume. Written by highly experienced active researchers, each chapter describes a particular area of omics and the associated technologies and applications. Topics covered include: Proteomics, epigenomics, and pharmacogenomics Toxicogenomics and the assessment of environmental pollutants Applications of plant metabolomics Nutrigenomics and its therapeutic applications Microalgal omics and omics approaches in biofuel production Next-generation sequencing and omics technology for transgenic plant analysis Omics approaches in crop improvement Engineering dark-operative chlorophyll synthesis Computational regulomics Omics techniques for the analysis of RNA splicing New fields, including metagenomics, glycomics, and miRNA Breast cancer biomarkers for early detection Environomics strategies for environmental sustainability This timely book explores a wide range of omics application areas in the biomedical, agricultural, and environmental sciences. Throughout, it highlights working solutions as well as open problems and future challenges. Demonstrating the diversity of omics, it introduces readers to state-of-the-art developments and trends in omics-driven research.

Download or read book Microbial Community Studies in Industrial Wastewater Treatment written by Maulin P. Shah and published by CRC Press. This book was released on 2022-12-30 with total page 253 pages. Available in PDF, EPUB and Kindle. Book excerpt: Describes the state-of-the-art techniques and the application of omics tools in wastewater treatment reactors (WWTRs) Includes both the theoretical and practical knowledge on the fundamental roles of microorganisms in WWTRs Discusses environmental microbial community proteomics Covers relating function and community structure of complex microbial systems using neural networks Reviews the economics of wastewater treatment and the development of suitable alternatives in terms of performance and cost effectiveness

Download or read book Environmental Microbiology written by Ian T Paulsen and published by Humana Press. This book was released on 2014-02-28 with total page 254 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Machine Learning Methods for Multi Omics Data Integration written by Abedalrhman Alkhateeb and published by Springer Nature. This book was released on 2023-12-15 with total page 171 pages. Available in PDF, EPUB and Kindle. Book excerpt: The advancement of biomedical engineering has enabled the generation of multi-omics data by developing high-throughput technologies, such as next-generation sequencing, mass spectrometry, and microarrays. Large-scale data sets for multiple omics platforms, including genomics, transcriptomics, proteomics, and metabolomics, have become more accessible and cost-effective over time. Integrating multi-omics data has become increasingly important in many research fields, such as bioinformatics, genomics, and systems biology. This integration allows researchers to understand complex interactions between biological molecules and pathways. It enables us to comprehensively understand complex biological systems, leading to new insights into disease mechanisms, drug discovery, and personalized medicine. Still, integrating various heterogeneous data types into a single learning model also comes with challenges. In this regard, learning algorithms have been vital in analyzing and integrating these large-scale heterogeneous data sets into one learning model. This book overviews the latest multi-omics technologies, machine learning techniques for data integration, and multi-omics databases for validation. It covers different types of learning for supervised and unsupervised learning techniques, including standard classifiers, deep learning, tensor factorization, ensemble learning, and clustering, among others. The book categorizes different levels of integrations, ranging from early, middle, or late-stage among multi-view models. The underlying models target different objectives, such as knowledge discovery, pattern recognition, disease-related biomarkers, and validation tools for multi-omics data. Finally, the book emphasizes practical applications and case studies, making it an essential resource for researchers and practitioners looking to apply machine learning to their multi-omics data sets. The book covers data preprocessing, feature selection, and model evaluation, providing readers with a practical guide to implementing machine learning techniques on various multi-omics data sets.

Download or read book Processing of Biomass Waste written by Angana Sarkar and published by Elsevier. This book was released on 2024-04-26 with total page 447 pages. Available in PDF, EPUB and Kindle. Book excerpt: Processing of Biomass Waste: Technological Upgradation and Advancement focuses on the exploitation of various waste management technologies and their associated process (microbial/chemical/physical) as tools to simultaneously generate value during treatment processes, including degradation/detoxification/stabilization toxic and hazardous contaminants. The book explores wastes as a veritable resource for wealth creation, with particular focus on resources recoverable from diverse wastes using special intervention of biotechnological tools. Other sections highlight recent technologies of waste bioprocessing in biorefinery approaches and enlighten on different approaches. The book encompasses advanced and updated information as well as future directions for young researchers and scientists who are working in the field of waste management, with a focus on sustainable value generation. Includes cutting-edge technologies in waste bioprocessing Focuses on applications of molecular biotechnological tools in waste bioprocessing Provides natural and eco-friendly solutions to deal with the problem of pollution aiming value generation Details underlying mechanisms of waste bioprocessing approaches that cover microbes for the simultaneous value generation and removal of emerging contaminants Includes field studies on the application of biorefinery approach for eco-restoration of contaminated sites Presents recent advances and challenges in waste bioprocessing research and applications for sustainable development

Download or read book Environmental Pollution Control Microbiology written by Ross E. McKinney and published by CRC Press. This book was released on 2004-03-11 with total page 390 pages. Available in PDF, EPUB and Kindle. Book excerpt: Compiling knowledge gained through more than 50 years of experience in environmental engineering technology, this book illustrates the application of fundamental concepts in microbiology to provide a sound basis for the design and operation of various biological systems used in solving environmental challenges in the air, water, and soil. Environmental Pollution Control Microbiology emphasizes the quantitative relationships of microbial growth and metabolism, beginning an examination of the overall metabolism and resulting growth of bacteria, fungi, algae, protozoa, rotifers, and other microorganisms and explains how bacteria bring about the stabilization of biodegradable organic pollutants.

Download or read book Microbiology and Parasitology for Environmental Engineering written by Charles Monterio and published by Discovery Publishing House (India). This book was released on 2024-04 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book focuses on the practical understanding of microorganisms in civil and environmental engineering processes. It is designed for environmental engineers who work in wastewater treatment, solid waste treatment, soil remediation, and ground improvement. The chapters in the book are written by prominent leaders and scientists in the field of environmental microbiology and microbial technologies. The book provides insight into the functions of microorganisms in environmental engineering systems and their role in solving environmental pollution problems worldwide. It covers the latest developments in environmental microbiology and microbial technologies, providing readers with up-to-date information and research. Environmental engineers play a critical role in managing and protecting the environment. Microorganisms are essential components of environmental engineering systems, and understanding their functions is crucial for effective environmental management. This book provides valuable information on the use of microorganisms in environmental engineering systems and their role in solving environmental pollution problems.

Download or read book Evolution of Translational Omics written by Institute of Medicine and published by National Academies Press. This book was released on 2012-09-13 with total page 354 pages. Available in PDF, EPUB and Kindle. Book excerpt: Technologies collectively called omics enable simultaneous measurement of an enormous number of biomolecules; for example, genomics investigates thousands of DNA sequences, and proteomics examines large numbers of proteins. Scientists are using these technologies to develop innovative tests to detect disease and to predict a patient's likelihood of responding to specific drugs. Following a recent case involving premature use of omics-based tests in cancer clinical trials at Duke University, the NCI requested that the IOM establish a committee to recommend ways to strengthen omics-based test development and evaluation. This report identifies best practices to enhance development, evaluation, and translation of omics-based tests while simultaneously reinforcing steps to ensure that these tests are appropriately assessed for scientific validity before they are used to guide patient treatment in clinical trials.

Download or read book Environmental Microbiology for Engineers Second Edition written by Volodymyr Ivanov and published by CRC Press. This book was released on 2015-11-30 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book enables engineering students to understand how microbiology can be applied to environmental research and practical applications. Written specifically for senior undergraduate to graduate level civil and environmental engineering students, the textbook encompasses both fundamental and applied principles and covers topics such as the microbiology of water, wastewater, soil and air biotreatment systems used in environmental engineering. This new, updated edition adds three entirely new chapters (environmental bionanotechnology, microbial geotechnology and environmental engineering of closed microbial ecosystems).

Download or read book Advances in Plant Microbiome Research for Climate Resilient Agriculture written by Ashwani Kumar and published by CRC Press. This book was released on 2024-08-07 with total page 302 pages. Available in PDF, EPUB and Kindle. Book excerpt: This new book, Advances in Plant Microbiome Research for Climate-Resilient Agriculture: Toward Sustainable Farming, covers important aspects of plant microbiome research through contributions from scientists with the latest information available in this area of research. The book provides an introduction to the concept of plant microbiome and its importance for climate-resistant crop plants and discusses the tools and techniques to analyze plant microbiome for sustainable agriculture productivity. It covers microbial endophytes as warriors for plant defense against abiotic and biotic stress. The book also highlights the importance of phyto-microbiomes and presents an overview of the role of metabolomics in bioremediation for sustainable crop production, introducing various metabolomics tools such as GC-MS, LC-MS, and NMR for the sustainable remediation of toxic pollutants from the environment. Web sources and software for metabolomics data interpretation are included as well. The book discusses abiotic and biotic stresses and their effects on crops, the concept and strategies of the rhizosphere microbiome manipulation in crop improvement, the microbial traits in plant stress tolerance and their importance for agriculture, exogenous applications of several compounds and phyto-microbiomes that mitigate the negative effects of salt stress on maize, and the beneficial plant microbial association for sustainable agriculture. With its coverage of the recent research on the current methods and technological advancements for increasing plant resilience to adverse climate scenarios, this volume will be a rich resource for botanists, plant specialists, and researchers concerned with crop science, plant physiology, and plant protection.

Download or read book Emerging Technologies in Applied and Environmental Microbiology written by Maulin P Shah and published by Elsevier. This book was released on 2023-01-06 with total page 252 pages. Available in PDF, EPUB and Kindle. Book excerpt: Emerging Technologies in Applied and Environmental Microbiology describes various problems and solutions that arise in applied and environmental microbiology using scientific technologies. The book summarizes the main omic-based methods currently used to characterize environmental microorganisms, as well as approaches to analyzing and interpreting the bio information generated by experimentally based studies. Sections explore the current understanding of bacterial signaling through examples of communication systems that include signaling in gram-positive and gram-negative bacteria, along with discussions on how microorganisms interact with each other, with other organisms, and with the environment. In addition, this comprehensive resource highlights the importance of various emerging technologies for cleaning up pollution in the environment caused by human activities. Final sections assess the potential application of several existing, applied and environmental microbiological techniques and introduces new and emerging technologies through applied aspects. Describes various problems and solutions that arise in applied and environmental microbiology using scientific technologies Summarizes the main omics-based methods currently used to characterize environmental microorganisms, as well as approaches to analyzing and interpreting the bio information generated by experimentally based studies Explores the current understanding of bacterial signaling through examples of communication systems that include signaling in gram-positive and gram-negative bacteria Shows the presence of all kinds of microbes in the natural environment for the removal of organic pollutants through various emerging technologies

Download or read book Microbiology for Environmental Scientists and Engineers written by Anthony F. Gaudy and published by McGraw-Hill Companies. This book was released on 1980 with total page 762 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Omics and Systems Approaches to Study the Biology and Applications of Lactic Acid Bacteria written by Konstantinos Papadimitriou and published by Frontiers Media SA. This book was released on 2020-10-13 with total page 309 pages. Available in PDF, EPUB and Kindle. Book excerpt: The economic importance of lactic acid bacteria (LAB) for the food industry and their implication in health and disease has rendered them attractive models for research in many laboratories around the world. Over the past three decades, molecular and genetic analysis of LAB species provided important insights into the biology and application of starter and probiotic LAB and in the virulence of LAB pathogens. The knowledge obtained prepared LAB researchers for the forthcoming opportunities provided by the advent of microbial genomics. Today, developments in next-generation sequencing technologies have rocketed LAB genome research and the sequences of several hundreds of strains are available. This flood of information has revolutionized our view of LAB. First of all, a detailed picture has emerged about the evolutionary mechanisms allowing LAB to inhabit the very diverge ecological niches in which they can be found. Adaptation of LAB to nutrient-rich environments has led to degenerative evolution processes that resulted in shortening of chromosomes and simplified metabolic potential. Gene acquisition through horizontal transfer, on the other hand, is also important in shaping LAB gene pools. Horizontally acquired genes have been shown to be essential in technological properties of starters and in probiosis or virulence of commensals. Progress in bioinformatics tools has allowed rapid annotation of LAB genomes and the direct assignment of genetic traits among species/strains through comparative genomics. In this way, the molecular basis of many important traits of LAB has been elucidated, including aspects of sugar fermentation, flavor and odor formation, production of textural substances, stress responses, colonization of and survival in the host, cell-tocell interactions and pathogenicity. Functional genomics and proteomics have been employed in a number of instances to support in silico predictions. Given that the costs of advanced next-generation methodologies like RNA-seq are dropping fast, bottlenecks in the in silico characterization of LAB genomes will be rapidly overcome. Another crucial advancement in LAB research is the application of systems biology approaches, by which the properties and interactions of components or parts of a biological system are investigated to accurately understand or predict LAB behavior. Practically, systems biology involves the mathematical modeling of complex biological systems that can be refined iteratively with wet-lab experiments. High-throughput experimentation generating huge amounts of data on the properties and quantities of many components such as transcripts, enzymes and metabolites has resulted in several systems models of LAB. Novel techniques allow modelling of additional levels of complexity including the function of small RNAs, structural features of RNA molecules and post-translational modifications. In addition, researchers have started to apply systems approaches in the framework of LAB multispecies ecosystems in which each species or strain is considered as a part of the system. Metatransciptomics, metaproteomics and metametabolomics offer the means to combine cellular behavior with population dynamics in microbial consortia.