Download or read book Novel Data driven Approaches to Elucidate Interactions Between Soybean and Phytopthora Sojae written by Thivanka Sandaruwan Ratnayake and published by . This book was released on 2022 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Phytophthora sojae is a soil-borne oomycete and the causal agent of Phytophthora stem and root rot (PSR) in soybean (Glycine max [L.] Merrill). The study couple high-throughput sequencing data, bioinformatics tools, and machine learning to elucidate molecular features in soybean following infection by P. Sojae as well as understand how P. Sojae evolve. We identified differentially expressed genes during compatible and incompatible interactions with P. sojae. Based on DNA Affinity Purification sequencing (DAP-seq) data, we trained a Deep Neural Network with convolution and recurrent layers to predict new target sites in the DE genes. We used 47 P. sojae isolates from the host rotation study and conducted variant calling analysis. According to genome-wide SNPs, population structure analysis indicates that there is a link between host resistant and mutations patterns in the pathogen. However, examination of the loci of 11 essential Avr genes does not support the hypothesis.
Download or read book Interaction Between Soybean and Phytophthora Sojae written by Richard Alfred Leitz and published by . This book was released on 1999 with total page 178 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Genetic Mapping in Experimental Populations written by J. W. Van Ooijen and published by Cambridge University Press. This book was released on 2013-08-08 with total page 171 pages. Available in PDF, EPUB and Kindle. Book excerpt: A concise introduction to genetic linkage map construction for biological researchers, combining theory with practical exercises and problem-solving tips.
Download or read book The Soybean Genome written by Henry T. Nguyen and published by Springer. This book was released on 2017-09-20 with total page 216 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book examines the application of soybean genome sequences to comparative, structural, and functional genomics. Since the availability of the soybean genome sequence has revolutionized molecular research on this important crop species, the book also describes how the genome sequence has shaped research on transposon biology and applications for gene identification, tilling and positional gene cloning. Further, the book shows how the genome sequence influences research in the areas of genetic mapping, marker development, and genome-wide association mapping for identifying important trait genes and soybean breeding. In closing, the economic and botanical aspects of the soybean are also addressed.
Download or read book Fungal Plant Pathogens 2nd Edition written by Charles R. Lane and published by CABI. This book was released on 2023-07-30 with total page 331 pages. Available in PDF, EPUB and Kindle. Book excerpt: This substantially updated edition now in full colour provides key techniques used when working with fungal and fungal-like plant pathogens. As a practical manual it also deals with disease recognition, detection and identification of fungi, plus methods to characterise and curate fungi and handle them under quarantine and quality assurance systems. Fungal Plant Pathogens: Applied Techniques, 2nd edition provides a valuable guide to investigating fungal plant diseases and interpreting laboratory findings for postgraduate and advanced undergraduate students, extension plant pathologists, consultants and advisers in agriculture, forestry and horticulture, and the food supply chain.
Download or read book Phytophthora written by Kurt Lamour and published by CABI. This book was released on 2013 with total page 256 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book begins with an account of the early history of Phytophthora research and the tumultuous events setting the genus in motion. In keeping with its controversial inception, the chapter on taxonomy and phylogeny makes a compelling case that our current notion of Phytophthora as a genus is illusory. This chapter sets the stage for the importance of molecular tools on these enigmatic pathogens. The following chapters discuss species identification, population-level investigation, interspecific hybrids and the impact of diverse Phytophthora species on crops, forests, nurseries, greenhouses and natural areas worldwide.
Download or read book Plant Fungal Pathogens written by Melvin Dennis Bolton and published by Springer Science+Business Media. This book was released on 2012 with total page 648 pages. Available in PDF, EPUB and Kindle. Book excerpt: Including reproducible laboratory protocols, this guide to fungal pathogens in plants has been written by expert researchers in the field and includes methods now used to study them, including techniques for model systems such as Arabidopsis thaliana.
Download or read book Oomycete Genetics and Genomics written by Kurt Lamour and published by John Wiley & Sons. This book was released on 2009-06-17 with total page 602 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book brings together the knowledge from and tools for genetic and genomic research into oomycetes to help solve the problems this pathogen poses to crops and animals. Armed with the information presented here, researchers can use oomycete data to solve practical problems and gain insight into future areas of interest. Key Features: Offers an up-to-date coverage of research into oomycetes – which has advanced with biochemical and molecular analyses in recent years Helps researchers use oomycete data to solve practical problems, like damage to crop and animal resources Includes a section on interactions with animal hosts Offers perspective on future areas of research Assembles an international author base
Download or read book Genomics of Plant Associated Fungi and Oomycetes Dicot Pathogens written by Ralph A. Dean and published by Springer. This book was released on 2014-08-22 with total page 244 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes how genomics has revolutionized our understanding of agriculturally important plant-associated fungi and oomycetes. It illustrates some fundamental discoveries about these eukaryotic microbes with regard to the overall structure of their genomes, their lifestyles and the molecular mechanisms that form the basis of their interactions with plants. Genomics has provided new insights into fungal lifestyles and led to practical advances in plant breeding and crop protection, such as predictions about the spread and evolution of new pathogens. This volume focuses on fungi and oomycetes that are typical dicot plant pathogens and includes: Sclerotinia sclerotiorum, Botrytis cinerea, Alternaria sp.,Verticillium alfalfae and Verticillium dahliae, Fusarium oxysporum, Phytophthora capsici, Phytophthora sojae, Phytophthora ramorum, Phytophthora infestans, Hyaloperonospora arabidopsidis.
Download or read book Fungicide Resistance in Plant Pathogens written by Hideo Ishii and published by Springer. This book was released on 2015-08-31 with total page 481 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume offers a comprehensive coverage of the general principles and recent advances in fungicide resistance. It describes the development, mechanisms, monitoring, and management of resistance and covers the most important group of fungicides that have caused resistance on various crops. An historical review of fungicide resistance over the past 40 years sets the scene for up-to-date basic information on mode of action, as well as the genetics, mechanisms, and evolution of resistance. Monitoring for resistance, including the latest developments in molecular diagnostics, moves readers into the practical aspects of resistance management, which is dealt with through a series of case studies outlining fungicide-use strategies on several key crops. The chapters reflect the experience of authors internationally recognised for their significant contributions to fungicide resistance research. The majority of crop diseases are caused by fungal pathogens, and disease control relies heavily on chemically synthesized fungicides. However, modern fungicides often encounter the problem of resistance development in target pathogens. Thus pathogen resistance to fungicides is an important factor that causes loss of yield and quality of crops. It often threatens biosecurity through the decrease of fungicide efficacy in the fields. To manage fungicide resistance successfully will require the promotion of integrated disease management, involving not just chemical fungicides, but also host plant resistance, agronomic factors, and reliable biological control agents where these are available. Well referenced throughout, the book offers a comprehensive account of resistance, which will be useful as a source of material for lecturers and for both industrial and academic scientists involved in fungicide resistance research. It is also a valuable sourcebook for students.
Download or read book Soybeans Improvement Production and Uses written by Billy E. Caldwell and published by . This book was released on 1973 with total page 712 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Ecology and Management of Soilborne Plant Pathogens written by American Phytopathological Society and published by . This book was released on 1985 with total page 376 pages. Available in PDF, EPUB and Kindle. Book excerpt: The study of soilborne plant pathogens: changing outlook or more of the same?; Characteristics of trends in disease caused by soilborne pathogens with spring barley monoculture; Mycophagous amoebas from arable, pasture, and forest soils; Northern poor root syndrome of sugarcane in Australia; Effects of soil insects on populations and germination of fungal propagules; A technique to comapre growth in soil of Gaeumannomyces graminis var. tritici over a range of matric potentials; Use of aerial photography for assessing soilborne disease; Isolation and characterization of plasmid DNA in the fungus Rhizoctonia solani; Sharp eyespot of cereals and Rhizoctonia of potato; Saprophytic survival of Gaeumannomyces graminis var. tritici in the Victorian Mallee, Australia; The changing nature of stalk rot of maize caused by Gibberella zeae; Collar rot of passion fruit possibly caused by Nectria haematococca in Taiwan; Survival of Phytophthora cinnamomi in eucalyptus roots buried in forest soils; The Rhizoctonia disease complex of wheat; Population and survival of sclerotia of Rhizoctonia solani in soil; Rhizoctonia in South Australian wheat fields; Anastomosis groups of Rhizoctonia solani and binucleate Rhizoctonia; A study of pepper wilt in Northern Iraq; Rhizoctonia on small-grain cereals in Great Britain; Fungal invasion of clover and grass roots in New Zealand pasture soils; Pathogenic Rhizoctonia and orchids; Origin and distribution of Phytophthora cinnamomi; The biology of the rhizosphere; Mode of colonization of roots by Verticillium and Fusarium; Dynamics of root colonization by the take-all fungus; A mathematical model of vesicular-arbuscular mycorrhizal infection in roots of Trifolium subterraneum; Rhizoplane mycoflora of Gahnia radula and Isopogon ceratophyllus in soils infested and free from Phytophthora cinnamomi; Soils suppressive to Fusarium wilt: mechanisms and management of suppressiveness; Reduction of take-all by mycophagous amoebas in pot bioassays; Trichoderma as a biocontrol agent against soilborne root pathogens; Chemical factors in soils suppressive to Pythium ultimum; Influence of trichoderma on survival of Thanatephorus cucumeris in association with rice in the tropics; Biological control of Fusarium wilt of sweet potato with cross-protection by nonpathogenic Fusarium oxysporum; Integrated biological and chemical control of sclerotial pathogens; Yield depressions in narrow rotations caused by unknown microbial factors and their suppression by selected pseudomonads; Antagonistic behavior of root region microfungi of pigeon pea against Fusarium udum; Control of Verticillium dahliae by coating potato seed pieces with antagonistic bacteria; Application of fluorescent pseudomonads to control root diseases; The role of seeds in the delivery of antagonists into the rhizosphere; Interactions between microbial residents of cereal roots; Survival of fungal antagonists of Gaeumannomyces graminis var. tritici; Control of wheat take-all and ophiobolus patch of turfgrass by fluorescent pseudomonads; Role of plant breeding in controlling soilborne diseases of cereals; Phytophthora drechsleri causes crown rot and the accumulation of antifungal compounds in cucurbits; Changes in root tissue permeability associated with infection by Phytophthora cinnamomi; Stability of Verticillium resistance of potato clones and changes in soilborne populations with potato monoculture; Field resistance of wheat cultivars to crown rot (Fusarium graminearum group 1); Variability in Phytophthora cactorum in India; Glasshouse test for tolerance of wheat to crown rot caused by Fusarium graminearum group 1; Development of inoculation technique for Rhizoctonia solani and its application to screening cereal cultivars for resistance; Phytophthora cinnamomi; a study of resistance in three native monocotyledons that invade diseased victorian forests; Relative susceptibility of wheat, rye, and triticale to isolates of take-all; New inoculation technique for Gaeumannomyces graminis var. tritici to measure dose response and resistance in wheat in field experiments; Soil as an environment for the growth of root pathogens; Lethal temperatures of soil fungi; Relation between root infection with Phytophthora cinnamomi and water relations in susceptible and field-resistant Eucalyptus species; Effects of soil temperature, moisture, and timing of irrigation on powdery scab of potatoes; Influence of depleted oxygen supply on phytophthora root rot of safflower in nutrient solution; Pea root pathogen populations in relation to soil structure, compaction, and water content; Wax layers for partitioning soil moisture zones to study the infection of wheat seedlings by Fusarium graminearum; Effect of frost on Fusarium root rot of alfalfa and possibility of double trait selection; Reduction in infection of wheat roots by Gaeumannomyces graminis var. tritici with application of manganese to soil; Effect of parent materials derived from different geological strata on suppressiveness of soils to black root rot of tobacco; Effect of varied NPK nutrition and inoculum density on yield losses of wheat caused by take-all; Influence of environmental factors and sclerotial origin and parasitism of Sclerotinia sclerotiorum by Coniothyrium minitans; Impact of herbicides on plant diseases; Effects of soil application of fungicides on take-all in winter wheat; Use of fungicides to study significance and etiology of root rot of subterranean clover in dryland pastures of Victoria; Suppression of soilborne diseases of ornamental plants by tree bark composts; Effects of cropping sequences on saprophytic survival and carry-over of Gaeumannomyces graminis var. tritici; Susceptibility of apple trees to Phytophthora cactorum and effect of systemic fungicides; Enhanced suppression of take-all root rot of wheat with chloride fertilizers; Effect of tillage on Heterodera avenae in wheat; Effect of rotation and tillage on take-all and Rhizoctonia root rot in wheat; Activity of fungicides in soil against infection of wheat roots by Gaeumannomyces graminis var. tritici; Integrated control of root rot of soybean caused by Phytophthora megasperma f.sp. glycinea; Cropping practices and root diseases; Root rot of irrigated subterranean clover in Northern Victoria: Significance and prospects for control; Solar disinfestation of soils; Soil solarization: effects on Fusarium wilt of carnation and Verticillium wilt of eggplant; Evaluation of soil solarization for control of clubroot of crucifers and white rot of onions in Southeastern Australia; Relative efficiency of polyethylene mulching in reducing viability of sclerotia of sclerotium oryzae in soil; Proceedings of the first International Workshop on Take-all of Cereals; preface to the Take-all Workshop; Session 1: Culture and taxonomy; Session 2: Inoculum; Session 3: Pathogenic variation; Session 4: Growth regulators, pesticides, and herbicides; Session 5: Disease expression and measurement; Session 6: Grower observations and questions; Session 7: Nutrition and fertilizers; Session 8: Environmental factors; Session 9: Host-parasite interactions; Session 10: Microbial interactions; Session 11: Disease management; Session 12: Suppressive soils and take-all decline; Session 13: Bacterization and biological control.
Download or read book Handbook of Plant Nutrition written by Allen V. Barker and published by CRC Press. This book was released on 2016-04-19 with total page 662 pages. Available in PDF, EPUB and Kindle. Book excerpt: The burgeoning demand on the world food supply, coupled with concern over the use of chemical fertilizers, has led to an accelerated interest in the practice of precision agriculture. This practice involves the careful control and monitoring of plant nutrition to maximize the rate of growth and yield of crops, as well as their nutritional value.
Download or read book Cumulated Index Medicus written by and published by . This book was released on 2000 with total page 1844 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Plant pathogen Interactions written by Nicholas J. Talbot and published by CRC Press. This book was released on 2004 with total page 272 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plant diseases are destructive and threaten virtually any crop grown on a commercial scale. They are kept in check by plant breeding strategies that have introgressed disease resistance genes into many important crops, and by the deployment of costly control measures, such as antibiotics and fungicides. However, the capacity for the agents of plant disease - viruses, bacteria, fungi, and oomycetes - to adapt to new conditions, overcoming disease resistance and becoming resistant to pesticides, is very great. For these reasons, understanding the biology of plant diseases is essential for the development of durable control strategies. Plant-Pathogen Interactions provides and overview of our current knowledge of plant-pathogen interactions and the establishment of plant disease, drawing together fundamental new information on plant infection mechanisms and host responses. The role of molecular signals, gene regulation, and the physiology of pathogenic organisms are emphasized, but the role of the prevailing environment in the conditioning of disease is also discussed. Emphasizing the broader understanding that has emerged from the use of molecular genetics and genomics, Plant-Pathogen Interactions highlights those interactions that have been most widely studied and those in which genome information has provided a new level of understanding.
Download or read book Comprehensive and Molecular Phytopathology written by Yuri Dyakov and published by Elsevier. This book was released on 2007-01-09 with total page 497 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book offers a collection of information on successive steps of molecular ‘dialogue’ between plants and pathogens. It additionally presents data that reflects intrinsic logic of plant-parasite interactions. New findings discussed include: host and non-host resistance, specific and nonspecific elicitors, elicitors and suppressors, and plant and animal immunity. This book enables the reader to understand how to promote or prevent disease development, and allows them to systematize their own ideas of plant-pathogen interactions. * Offers a more extensive scope of the problem as compared to other books in the market* Presents data to allow consideration of host-parasite relationships in dynamics and reveals interrelations between pathogenicity and resistance factors* Discusses beneficial plant-microbe interactions and practical aspects of molecular investigations of plant-parasite relationships* Compares historical study of common and specific features of plant immunity with animal immunity
Download or read book Effectors in Plant Microbe Interactions written by Francis Martin and published by John Wiley & Sons. This book was released on 2012-01-03 with total page 442 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plants and microbes interact in a complex relationship that can have both harmful and beneficial impacts on both plant and microbial communities. Effectors, secreted microbial molecules that alter plant processes and facilitate colonization, are central to understanding the complicated interplay between plants and microbes. Effectors in Plant-Microbe Interactions unlocks the molecular basis of this important class of microbial molecules and describes their diverse and complex interactions with host plants. Effectors in Plant Microbe Interactions is divided into five sections that take stock of the current knowledge on effectors of plant-associated organisms. Coverage ranges from the impact of bacterial, fungal and oomycete effectors on plant immunity and high-throughput genomic analysis of effectors to the function and trafficking of these microbial molecules. The final section looks at effectors secreted by other eukaryotic microbes that are the focus of current and future research efforts. Written by leading international experts in plant-microbe interactions, Effectors in Plant Microbe Interactions, will be an essential volume for plant biologists, microbiologists, pathologists, and geneticists.
