Download or read book Microbes Among Marine Giants written by and published by . This book was released on 2018 with total page 171 pages. Available in PDF, EPUB and Kindle. Book excerpt: Kelp forest ecosystems are distributed on the rocky reefs of coastal regions worldwide. Kelps (order Laminariales) are a diverse group of brown macroalgae containing numerous species including giant kelp, Macrocystis pyrifera. The giant kelp dominates the kelp forests of southern California, engineering complex three-dimensional habitat which provides foundational shelter, nursery, and nutrients to marine organisms including invertebrates, fish, and marine mammals. While the kelp forests of southern California are well-regarded for their ecological and economic importance, traditional ecological surveys have ignored the most abundant fraction within the ecosystem - microbes. Microbes, including bacteria, archaea, and micro-eukaryotes, are present on all submerged surfaces in marine ecosystems, including microbiomes on macroorganisms. Microbes serve key ecological roles, including cycling of nutrients such as carbon and nitrogen to higher trophic levels within the ecosystem. Host-associated microbes have a symbiotic relationship with the host, providing environmentally-limited nutrients and protection from pathogen invasion in exchange for settlement substrate and host-derived metabolic exudates. Despite the known importance of microbes in marine ecosystems, microbes are absent from classic ecological models describing the top-down and bottom-up regulating forces structuring kelp populations. Thus, for my dissertation I aimed to address the lack of knowledge on the microbial ecology of southern California kelp forests, including the interactions between the predominant macroalgae and the associated microbiomes. In Chapter 1, I established a baseline description of the taxonomic structure and functional potential of microbial communities residing within the Macrocystis pyrifera-dominated kelp forest of Point Loma, CA, and identified sources of variation in microbiome profiles. The Point Loma kelp forest is subject to fluctuations in environmental conditions resulting from seasonality and stratification, which has an influence on kelp forest productivity. However, the potential direct and indirect effects of altered kelp forest environmental conditions on the microbial community structure and function has yet to be described, and as such I aimed to address this for Chapter 1. I sampled microbiomes from both the M. pyrifera biofilm and the adjacent water column seasonally over a three year investigation (2013-2016). I described the microbiomes in great depth using culture-independent whole genome shotgun metagenomics, and assessed the spatial and temporal variability in microbiome composition, function, and diversity. The microbiomes of the kelp and water were distinct in both taxonomic composition and functional potential. Kelp microbiomes remained stable across vertical depth, did not change significantly across season, and were not influenced by biophysical measurements of the surrounding environmental conditions. In contrast, the water-associated microbiomes varied significantly across depth with distinct community profiles above and below the thermocline stratification, showed significant changes across season, and seasonal changes within microbiome structure were strongly correlated with biophysical measurements of kelp forest productivity. Overall, my results showed that while free-living microbiomes were structured by the surrounding environmental conditions, host factors outweighed environmental factors in structuring hostassociated microbiomes. In Chapter 2, I examined the potential shifts in the baseline kelp forest microbiomes resulting from disturbance caused by the spread of an invasive alga, and the potential microbial influence in the alga's invasion strategy. This investigation took place at Santa Catalina Island within the Channel Islands 40 km offshore southern California, throughout the progression of the species invasion (2014-2018). Catalina Island has historically boasted dense populations of the native alga Macrocystis pyrifera, but has undergone disturbance due to the invasion and spread of invasive alga, Sargassum horneri. Invasive species cause significant alterations to ecosystems with both physical and chemical influences which deter and inhibit recovery of native species; however, whether there is a microbial influence in the invasion strategy of alga S. horneri is unknown. First, I described the microbiome of the invasive S. horneri and compared it to the native M. pyrifera, and found the microbiomes of the two macroalgal species to be distinct; specifically, the S. horneri microbiome was enriched in potentially pathogenic Vibrios. Next, I identified the potential for S. horneri presence to induce changes in the surrounding microbiomes. In 2018 as the native alga M. pyrifera was attempting to recover from disturbance, M. pyrifera and S. horneri existed in an interface at some sites. Where the two were in direct contact, I observed evidence of tissue bleaching and deterioration of the native alga, and investigated whether this detriment was a direct result of microbial pathogens. I did not find evidence of S. horneri microbiome inoculation onto the adjacent M. pyrifera; rather, the bleached M. pyrifera showed dysbiosis where the microbiome was lost completely compared to healthy M. pyrifera individuals nearby. However, I did find evidence of S. horneri microbiome inoculation onto the benthic substrate directly below the invasive alga, which resulted in an enrichment of Vibrios compared to the microbiome from benthic substrate beneath native M. pyrifera, and the enrichment of Vibrios on the benthic substrate occurred concurrently with a lack of native algal recovery at those locations. My findings suggest that the invasive species S. horneri has altered the baseline microbiome structure in the kelp forest, and the induced microbial changes may have an ongoing influence on the native species as they attempt to recover from disturbance. In Chapter 3, I investigated the microbial influence on a key stage of recruitment of the giant kelp, Macrocystis pyrifera. Macroalgae, including kelps, rely on recruitment processes to maintain adult populations and recover from disturbances. During kelp recruitment processes, microscopic propagules are released into the kelp forest water column where they are suspended until settlement onto the benthic substrate. Microscopic propagules are highly susceptible to abiotic conditions including UV irradiation, temperature, and nutrients, and biotic conditions including grazing. However, the influence of microbes on kelp propagule success has not been widely studied. Given that microbes are abundant in marine ecosystems (106 cells per ml of seawater) and are present on every submerged surface, microbes are likely to interact with kelp propagules during recruitment processes. For this investigation I reared M. pyrifera microscopic propagules in laboratory microcosms and exposed them to environmentally-sourced microbial communities within treatments. First, I investigated whether the presence of microbes influenced M. pyrifera propagules, and found that removing microbes in seawater increased propagule recruitment success. I then assessed the propagule success when exposed to a nearshore (Point Loma, CA) microbial community compared to an offshore (Santa Catalina Island, CA) microbial community, at multiple levels of microbial abundance. At the time the experiment was conducted, Catalina Island fostered a pristine kelp forest with lower anthropogenic influence compared to the nearshore Point Loma kelp forest. The nearshore (Point Loma) microbial community treatments yielded similar results to the first experiment, where removing microbes resulted in higher kelp propagule success. In contrast, kelp propagules exposed to offshore (Catalina) microbes had the greatest success when microbes were present at intermediate abundances, rather than removed completely. In both treatments, a microbialization of the seawater resulted in observed morphological detriment to kelp propagules. This study suggests that kelp forest microbes have an influence on a key stage of kelp recruitment, and the composition of the microbial community is important in recruitment success. Collectively, my dissertation shows that microbes influence kelp forest ecosystem dynamics and must be incorporated into future population and community models for a more holistic description of the ecosystem.

Download or read book In the Company of Microbes written by Moselio Schaechter and published by John Wiley & Sons. This book was released on 2020-07-10 with total page 292 pages. Available in PDF, EPUB and Kindle. Book excerpt: A look at the amazing, groovy world of microbes With more than 1,000 posts and 2 million views, the esteemed blog Small Things Considered has been sparking the imagination of microbiologists for an entire decade. Throughout the years, Elio Schaechter and his team of dedicated bloggers have shared exciting, unexpected, and unusual stories from the microbial world. In the Company of Microbes is a carefully selected treasure chest of wise, amusing, and even profound statements about the ubiquity and relevance of the microbial world. Schaechter, past ASM Presidents, and distinguished microbiologists from around the globe reflect on personal, sometimes historic interactions with microbes and unexpected discoveries, each essay conveying the excitement and sense of surprise that microbiology holds for them. This is the reason that Small Things Considered is a scientific and social media phenomenon that has impacted scientists at every stage of their careers and shared the magical of microbes with world. Join Schaechter in discovering a never-ending pageant of astounding variations on the theme of microbial life. Enjoy!

Download or read book Motility of the Giant Sulfur Bacteria Beggiatoa in the Marine Environment written by Rita Dunker and published by . This book was released on 2010 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Life in the World s Oceans written by Alasdair McIntyre and published by John Wiley & Sons. This book was released on 2011-06-09 with total page 623 pages. Available in PDF, EPUB and Kindle. Book excerpt: Life in the World's Oceans: Diversity, Abundance and Distribution is a true landmark publication. Comprising the synthesis and analysis of the results of the Census of Marine Life this most important book brings together the work of around 2000 scientists from 80 nations around the globe. The book is broadly divided into four sections, covering oceans past, oceans present, oceans future and a final section covering the utilisation of the data which has been gathered, and the coordination and communication of the results. Edited by Professor Alasdair Mcintyre, Marine Life is a book which should find a place on the shelves of all marine scientists, ecologists, conservation biologists, oceanographers, fisheries scientists and environmental biologists. All universities and research establishments where biological, earth and fisheries science are studied and taught should have copies of this essential book on their shelves. A true landmark publication One of the most important marine science books ever published Contributions from many world leading researchers Synthesis of a huge amount of important data Represents the culmination of 10 years' research by 2000 scientists from 80 countries

Download or read book The Biochemical Interaction Between the Giant Kelp Macrocystis Pyrifera and Its Bacterial Epiphytes written by Jeff J. Layne and published by . This book was released on 1999 with total page 132 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Bacteria written by Trudy M. Wassenaar and published by John Wiley & Sons. This book was released on 2012-11-12 with total page 244 pages. Available in PDF, EPUB and Kindle. Book excerpt: "This book introduces bacteria and basic microbiological concepts to readers without previous background in the subject. Each chapter concentrates on a particular topic and can be read in isolation or as part of the whole, and wherever possible points are illustrated through real-world examples and short stories. Although bacterial scientific names are used and translated when possible, in general scientific jargon is avoided in order to make the material as accessible as possible for the lay reader"--

Download or read book Marine Microbiology written by Colin Munn and published by Garland Science. This book was released on 2011-04-01 with total page 394 pages. Available in PDF, EPUB and Kindle. Book excerpt: Marine Microbiology brings together microbial biology and ecology to create an integrated approach that addresses environmental management, human health, and economic concerns. The Second Edition takes into account many new discoveries in the field including the role of microbes in ocean processes and nutrient cycles, the importance of viruses, the beneficial role of marine microbes in biotechnology, biofuels, metagenomics and synthetic biology, and new research on the impact of climate change and ocean acidification. The first three sections review the main features of the marine environment and key aspects of marine microbial life; the second section examines the role of marine microorganisms in ecology; and the final section considers some of the applications of this knowledge in areas such as disease and biodegradation. Marine Microbiology is ideally suited for upper level undergraduate and graduate students, and researchers.

Download or read book Responses of Marine Microbes to Multiple Environmental Drivers of Global Change the Interplay of Abiotic and Biotic Factors written by Yuanyuan Feng and published by Frontiers Media SA. This book was released on 2022-10-17 with total page 317 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book The Marine Microbiome written by Lucas J. Stal and published by Springer Nature. This book was released on 2022-02-28 with total page 768 pages. Available in PDF, EPUB and Kindle. Book excerpt: This updated and expanded second edition reviews numerous aspects of the marine microbiome and its possible industrial applications. The marine microbiome is the total of microorganisms and viruses in the ocean and seas and in any connected environment, including the seafloor and marine animals and plants. In the first part of the book, diversity, origin and evolution of the marine microorganisms and viruses are discussed. The microbes presented originate from all three domains of life: Bacteria, Archaea, and Eukarya. The second part sheds some light on the different communities: it describes marine habitats and how their inhabitants control biogeochemical cycles. The third part finally examines the microbial ocean as a global system and evaluates methods of utilizing marine microbial resources. Adopting a translational approach, the book connects academic research with industrial applications, making it a fascinating read and valuable resource for microbiologists from both domains.

Download or read book Micro organisms and Earth Systems written by Hilary Lappin-Scott and published by Cambridge University Press. This book was released on 2005-10-13 with total page 396 pages. Available in PDF, EPUB and Kindle. Book excerpt: There is growing awareness that important environmental transformations are catalysed, mediated and influenced by microorganisms, and geomicrobiology can be defined as the influence of microorganisms on geologic processes. This is probably the most rapidly growing area of microbiology at present, combining environmental and molecular microbiology together with significant areas of mineralogy, geochemistry and hydrology. This volume focuses on the function of microorganisms in the environment and their influence on 'global' processes. It will include state-of-the art approaches to visualisation, culture and identification, community interactions and gene transfer, and diversity studies in relation to key processes. This overview for researchers and graduate students will represent environmental microbiology in its broadest sense and help to promote exciting collaborations between microbiologists and those in complementary physical and chemical disciplines.

Download or read book Marine Microbiology written by Colin B. Munn and published by CRC Press. This book was released on 2019-11-26 with total page 606 pages. Available in PDF, EPUB and Kindle. Book excerpt: The third edition of this bestselling text has been rigorously updated to reflect major new discoveries and concepts since 2011, especially progress due to extensive application of high-throughput sequencing, single cell genomics and analysis of large datasets. Significant advances in understanding the diversity and evolution of bacteria, archaea, fungi, protists, and viruses are discussed and their importance in marine processes is explored in detail. Now in full colour throughout, all chapters have been significantly expanded, with many new diagrams, illustrations and boxes to aid students’ interest and understanding. Novel pedagogy is designed to encourage students to explore current high-profile research topics. Examples include the impacts of rising CO2 levels on microbial community structure and ocean processes, interactions of microbes with plastic pollution, symbiotic interactions, and emerging diseases of marine life. This is the only textbook addressing such a broad range of topics in the specific area of marine microbiology, now a core topic within broader Marine Science degrees. A Companion Website provides additional online resources for instructors and students, including a summary of key concepts and terminology for each chapter, links to further resources, and flashcards to aid self-assessment.

Download or read book Inventory of Biodiversity Today written by Violaine Nicolas and published by John Wiley & Sons. This book was released on 2024-09-04 with total page 276 pages. Available in PDF, EPUB and Kindle. Book excerpt: Our knowledge of living organisms is still very limited, with less than 20% of the world’s species known to date. It is therefore essential to increase our efforts to inventory biodiversity. This is the goal of scientific research, but it is also a vital responsibility in the face of the sixth extinction. With so many species set to disappear before they can be analyzed, the compilation of this inventory now represents a major challenge. Thanks to the collaborative work of numerous researchers from the Institut de systématique, évolution, biodiversité (ISYEB) and other institutions, Inventory of Biodiversity Today presents the latest methods of field data collection and analysis. Strategies have diversified and are providing new and ever-more-precise data on a growing number of specimens. All of these data are integrated to delimit and describe living species, and are accessible to as many people as possible, so we can all take action on a daily basis to better understand and preserve our planet.

Download or read book The Biological Role of a Virus written by Christon J. Hurst and published by Springer Nature. This book was released on 2022-02-12 with total page 374 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book answers the question “What is it that viruses do?” by presenting three aspects of viral ecology. The first aspect explains how viruses affect the population diversity and energetics of their host communities. Perhaps the most notable example of this concept is our understanding that primary production within ecosystems often depends upon those viruses which serve as controllers of nutrient recycling, connecting the aquatic and terrestrial realms in ways that can be assessed locally and globally. The second aspect describes genetic partnerships which exist between hosts and their viruses. These include processes termed endogeny and lysogeny by which the host carries at least a partial genomic copy of the virus. Fluidity of these collective genomes is expressed on an evolutionary time scale and the mutual life cycles which they produce represent a forging of shared genomic fate that obligates partnership of the virus and its host. The viral sequences represent a source of potential benefit as well as potential peril for the host and can implement phenotypic changes in the host. Hosts often use those changes as tools. As humans, the most notable example would be that mammals rely upon temporary activation of their endogenous viral genes in order to successfully develop a placenta. The third aspect is defending the health of a host, which relies upon activity in two directions. Hosts often use their captured viral genes to identify and subsequently direct battle against invading viruses. This natural concept has been engineered for combating cancer, is useful for suppressing the detrimental consequences of genetic diseases, and has been developed to create targeted antiviral vaccines. But, the defense has to work in two directions and the host can use other symbiotic microorganisms as protection against its viruses. This book will appeal to a wide readership by providing a broad perspective of viral ecology, and all scientists will find it helpful for gaining a view of fields beyond their specialization.

Download or read book Biodiversity of Marine Microbes written by Savvas Genitsaris and published by MDPI. This book was released on 2021-08-31 with total page 104 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book entitled “Biodiversity of Marine Microbes” aims at highlighting the significance of marine microbes as primary producers, their contribution in complex ecological processes and their roles in biogeochemical cycles and ecosystem functioning. The book includes five research papers covering the diversity and composition of marine microbial communities representing all three domains of life in various marine environments, including coastal eutrophic areas, ice waters, and lagoons. One paper examines the diversity and succession of bacterial and archaeal communities from coastal waters in mesocosm experiments. The combination of classical tools with novel technological advances implemented in the methods of the papers offered an opportunity to answer fundamental questions and shed light on the complex and diverse life of marine microbes.

Download or read book Citizens of the Sea written by Nancy Knowlton and published by National Geographic Books. This book was released on 2010 with total page 216 pages. Available in PDF, EPUB and Kindle. Book excerpt: In this refreshing, reader-friendly, and colorfully illustrated book about the ocean, renowned marine scientist Knowlton presents an overview of the hundreds of species that have been discovered in the past decade.

Download or read book The Marine Microbiome written by Lucas J. Stal and published by Springer. This book was released on 2016-06-03 with total page 501 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes the state-of-the-art concerning the ‘marine microbiome’ and its uses in biotechnology. The first part discusses the diversity and ecology of marine microorganisms and viruses, including all three domains of life: Bacteria, Archaea, and Eukarya. It discusses whether marine microorganisms exist and, if so, why they might be unique. The second part presents selected marine habitats, their inhabitants and how they influence biogeochemical cycles, while the third discusses the utilization of marine microbial resources, including legal aspects, dissemination, and public awareness. The marine microbiome is the total of microorganisms and viruses in the ocean and seas and in any connected environment, including the seafloor and marine animals and plants. The diversity of microbial life remains unquantified and largely unknown, and could represent a hidden treasure for human society. Accordingly, this book is also intended to connect academics and industry, providing essential information for microbiologists from both fields.

Download or read book Host Microbe Interactions written by and published by Academic Press. This book was released on 2016-08-03 with total page 346 pages. Available in PDF, EPUB and Kindle. Book excerpt: Host-Microbe Interactions, the latest volume in the Progress in Molecular Biology series, provides a forum for the discussion of new discoveries, approaches, and ideas in molecular biology. It contains contributions from leaders in their respective fields, along with abundant references. This volume is dedicated to the subject of host-microbe interactions. Provides the latest research on host-microbe interactions, including new discoveries, approaches, and ideas Contains contributions from leading authorities on topics relating to molecular biology Informs and updates on all the latest developments in the field