Download or read book Linking Structure and Function to Manage Microbial Communities Carrying Out Chlorinated Ethene Reductive Dechlorination written by Michal Ziv-El and published by . This book was released on 2012 with total page 177 pages. Available in PDF, EPUB and Kindle. Book excerpt: Contamination by chlorinated ethenes is widespread in groundwater aquifers, sediment, and soils worldwide. The overarching objectives of my research were to understand how the bacterial genus Dehalococcoides function optimally to carry out reductive dechlorination of chlorinated ethenes in a mixed microbial community and then apply this knowledge to manage dechlorinating communities in the hydrogen-based membrane biofilm reactor (MBfR). The MBfR is used for the biological reduction of oxidized contaminants in water using hydrogen supplied as the electron donor by diffusion through gas-transfer fibers. First, I characterized a new anaerobic dechlorinating community developed in our laboratory, named DehaloR^2, in terms of chlorinated ethene turnover rates and assessed its microbial community composition. I then carried out an experiment to correlate performance and community structure for trichloroethene (TCE)-fed microbial consortia. Fill-and-draw reactors inoculated with DehaloR^2 demonstrated a direct correlation between microbial community function and structure as the TCE-pulsing rate was increased. An electron-balance analysis predicted the community structure based on measured concentrations of products and constant net yields for each microorganism. The predictions corresponded to trends in the community structure based on pyrosequencing and quantitative PCR up to the highest TCE pulsing rate, where deviations to the trend resulted from stress by the chlorinated ethenes. Next, I optimized a method for simultaneous detection of chlorinated ethenes and ethene at or below the Environmental Protection Agency maximum contaminant levels for groundwater using solid phase microextraction in a gas chromatograph with a flame ionization detector. This method is ideal for monitoring biological reductive dechlorination in groundwater, where ethene is the ultimate end product. The major advantage of this method is that it uses a small sample volume of 1 mL, making it ideally suited for bench-scale feasibility studies, such as the MBfR. Last, I developed a reliable start-up and operation strategy for TCE reduction in the MBfR. Successful operation relied on controlling the pH-increase effects of methanogenesis and homoacetogenesis, along with creating hydrogen limitation during start-up to allow dechlorinators to compete against other microorgansims. Methanogens were additionally minimized during continuous flow operation by a limitation in bicarbonate resulting from strong homoacetogenic activity.
Download or read book Microbial Reductive Dechlorination of Chlorinated Ethenes written by Benjamin Matthew Griffin and published by . This book was released on 2003 with total page 352 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Bacterial Adaptation to the Chlorinated Compounds written by Maude David and published by . This book was released on 2009 with total page 238 pages. Available in PDF, EPUB and Kindle. Book excerpt: This thesis concerns the bacterial adaptation to the chlorinated compounds at both the gene level and the microbial community level. The bibliography will focus on the adaptation mechanisms developed by bacteria to respond to environmental stresses and on the possible origins of the genes responsible for the first steps of chlorinated compound degradation, those encoding for the dehalogenases, which perform the dechlorination or chlorine removal step. The second chapter of the thesis consists of an experimental exploration of the gene shuffling hypothesis presented in the bibliography, using linB and dhaA genes. The next chapter examines the bacterial community structure in relation to compound degradation using the reductive dechlorination of tetrachloroethylene. For this study, molecular biology tools, specifically phylochip microarrays were used to examine bacterial community structure from the moment of pollutant introduction to the environment and during bioremediation. In order to elucidate the metabolic functions, which correlate the PCE degradation, phylogenetic results were compared with functional genes in the microcosms studied. The last chapter of this global study on chlorinated compound degradation genes was to link the microbial community structure kinetics with the chemical degradation kinetics. In order to evaluate the molecular biological parameters of the microbial community, all the genes known to be involved in the entire pathway of PCE reductive dechlorination were quantified. This global study, incorporating chemical monitoring, dehalogenase quantification and microbial community structure, produced correlations between the environmental conditions necessary for dechlorination and the microbial community associated with dehalogenase expression. In summary, both the mechanisms implemented by the bacteria to degrade this compound pollutant and the bacterial community structure during the pollutant degradation were addressed. Improving the understanding of these two steps in bacterial adaptation can contribute to the understanding of bacterial and environmental cleanup capabilities.
Download or read book Isolation and Ecology of Bacterial Populations Involved in Reductive Dechlorination of Chlorinated Solvents written by Youlboong Sung and published by . This book was released on 2005 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: The findings of this study demonstrate that Dehalococcoides species are intimately involved in complete reductive detoxification of chlorinated ethenes and are widely distributed in anoxic sediments and aquifers, including non-contaminated (pristine) environments. Careful examination of enrichment culture dechlorination kinetics, 16S rRNA gene based analyses, and reductive dehalogenase gene targeted PCR approaches revealed that complete reductive dechlorination is carried out by multiple dechlorinators. Two new dechlorinating species were isolated from contaminated and non-contaminated site materials. The first new isolate, designated strain SZ, was isolated from PCE-to-ethene dechlorinating microcosms established with creek sediment. 16S rRNA gene sequence of the strain SZ indicates that the new isolate is affiliated with the genus Geobacter most closely related to G. thiogenes. Strain SZ is capable of stepwise dechlorination of PCE to cis-DCE, while the closest relatives were not able to dechlorinate PCE or TCE. Dechlorination of PCE or TCE by strain SZ was supported by acetate, hydrogen or pyruvate as electron donor. Chloroethene-dechlorinating populations have been shown to have distinct electron donor requirements. However, none of previously described chlorinated ethene degrading population can use both, acetate and hydrogen, as electron donors. PCE dechlorination by strain SZ uses both acetate and hydrogen as electron donors suggesting that the ability to versatile electron donor utilization may increase the efficiency of bioremediation approaches. Importantly, strain SZ reduced two environmental priority pollutants, PCE and U(VI) concomitantly and detected from both bio-stimulated chloroethene and uranium contaminated sites, strongly suggesting that strain SZ play a important roles in in-situ bioremediation of chloroethene and U(VI) contaminated sites. The second, a new Dehalococcoides species designated strain GT, was isolated from contaminated site materials. Strain GT uses trichloroethene (TCE), cis-DCE, 1,1-dichloroethene (1,1-DCE), and the human carcinogen vinyl chloride (VC) as growth supporting electron acceptors producing products ethene and inorganic chloride. The new isolate shares common traits of Dehalococcoides such as ampicillin resistance, strict hydrogen-dependent metabolism, and a low hydrogen consumption threshold concentration. Culture-dependent and independent, 16S rRNA gene and reductive dehalogenase gene targeted PCR approaches suggested culture purity.
Download or read book Anaerobic Reductive Dechlorination of TCE and TCFE in TCE Contaminated Sediments written by Jae-Hyuk Lee and published by . This book was released on 2006 with total page 280 pages. Available in PDF, EPUB and Kindle. Book excerpt: This research focused on the enhanced reductive dechlorination of trichloroethene (TCE) and its surrogate, trichlorofluoroethene (TCFE), using two bioremediation methods in anaerobic conditions. Two anaerobic bioremediation studies were conducted to investigate the effects of microbial communities in the presence of different electron acceptors and donors during anaerobic reductive dechlorination of TCE and TCFE. The first study was conducted in the groundwater microcosm bottles, filled with groundwater and sediments collected from Richmond site, CA. Parallel reductive dechlorination of TCE and TCFE was evaluated in the presence of fumarate and its product, succinate, while active reduction of high background concentrations of sulfate (2.5 mM) occurred. Because sulfate was assumed as a favorable electron acceptor during reductive dechlorination of chlorinated aliphatic hydrocarbons (CAHs), all microcosms receiving TCE and TCFE with substrates showed enhanced reductive dechlorination activity and even no substrate addition microcosms generated biotransformation products. From the electron mass balance calculations, more than 87.5% of electrons went to sulfate reduction and less than 10% of available electrons involved in dechlorination after sulfate reductions. After amending varying concentrations of sulfate (0 2.5 mM), no inhibition was found between reductive dechlorination of TCE and sulfate reduction. The result indicated that reductive dechlorination could be directly competed with sulfate reduction for available electrons. The second study investigated the effectiveness of in situ push-pull tests to evaluate bioaugmentation in physical aquifer models (PAMs) using dehalogenating strains to reductively dechlorinate TCE to ethene and TCFE to FE in the TCE contaminated sediments. Complete reduction of TCE to ethene occurred in less than 14 days with repeated additions of TCE (13.0 to 46.0 mg/L) and TCFE (15.0 mg/L) was completely transformed to FE in under 24 days. Increased rate and extent of dechlorination in the bioaugmented PAM compared to the nonaugmented control PAM indicated successful transport of the bioaugmented culture through the PAM. Similar transformation rates and time course of TCE and TCFE also indicated that TCFE was a bioprobe for reductive dechlorination of TCE. TCE and TCFE were transformed to cisdichloroethene (c-DCE) and cis-dichlorofluoroethene (c-DCFE) respectively at two of the three sampling ports after 50 days of incubation in the nonaugmented PAM indicating reductive dechlorination activity of indigenous microorganisms. The results showed that it is possible to increase the rate and extent of reductive dechlorination of TCE and TCFE by bioaugmentation and that push-pull tests are effective tools for detecting and quantifying these processes in situ. The third study focused on numerical modeling of the second study. The objectives of this study were (1) to evaluate a simplified method for estimating retardation factors for injected solutes and bioaugmented microorganisms using "pushpull" test injection phase breakthrough curves, (2) to identify whether bioaugmented microorganisms have kept the same transformation capacity of Evanite culture using Michaelis-Menten kinetics by the values provided by Yu et al. (2005) and to verify in situ rates of TCFE reductive dechlorination rates of push-pull tests by numerical modeling, and (3) to investigate a reasonable answer for the nonuniform recovery of ethene and FE during the activity test and the push-pull test. The bioaugmented microorganisms were effectively transported through Hanford sediment. The estimated retardation factor was 1.33. A numerical simulation predicted cell transport in the PAM as far as port 5. This was qualitatively confirmed by cell counts obtained during bioaugmentation but, cells were distributed nonuniformly. The transport test indicated that TCE and TCFE transport was relatively retarded compared to coinjected bromide tracer (retardation factors ranged from 1.33-1.62 for TCE and from 1.44-1.70 for TCFE). The modeling simulation of Michaelis-Menten kinetics for the activity test was well matched for reductive dechlorination rates for TCE and less dechlorinated ethenes using the previous published values of kmax and Ks of chlorinated ethenes by Yu et al. (2005); the model match indicated that the bioaugmented microorganisms kept the same transformation capacity as the original source, Evanite culture (Yu et al., 2005) over 4 months in the PAM. A numerical simulation resulted in the simple first order FE production rate of 1 day' using STOMP code (2002) and the value of FE production rate was in the range of the transformation rates of TCFE during the activity test. The bioaugmented PAM has caused slow loss of injected CAHs during the activity test and the push-pull test.
Download or read book Organohalide Respiring Bacteria written by Lorenz Adrian and published by Springer. This book was released on 2016-08-03 with total page 620 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book summarizes the current state of knowledge concerning bacteria that use halogenated organic compounds as respiratory electron acceptors. The discovery of organohalide-respiring bacteria has expanded the range of electron acceptors used for energy conservation, and serves as a prime example of how scientific discoveries are enabling innovative engineering solutions that have transformed remediation practice. Individual chapters provide in-depth background information on the discovery, isolation, phylogeny, biochemistry, genomic features, and ecology of individual organohalide-respiring genera, including Dehalococcoides, Dehalogenimonas, Dehalobacter, Desulfitobacterium and Sulfurospirillum, as well as organohalide-respiring members of the Deltaproteobacteria. The book introduces readers to the fascinating biology of organohalide-respiring bacteria, offering a valuable resource for students, engineers and practitioners alike.
Download or read book Bioaugmentation for Groundwater Remediation written by Hans F. Stroo and published by Springer Science & Business Media. This book was released on 2012-10-02 with total page 421 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume provides a review of the past 10 to 15 years of intensive research, development and demonstrations that have been on the forefront of developing bioaugmentation into a viable remedial technology. This volume provides both a primer on the basic microbial processes involved in bioaugmentation, as well as a thorough summary of the methodology for implementing the technology. This reference volume will serve as a valuable resource for environmental remediation professionals who seek to understand, evaluate, and implement bioaugmentation.
Download or read book Comprehensive Biotechnology written by and published by Elsevier. This book was released on 2019-07-17 with total page 4876 pages. Available in PDF, EPUB and Kindle. Book excerpt: Comprehensive Biotechnology, Third Edition, Six Volume Set unifies, in a single source, a huge amount of information in this growing field. The book covers scientific fundamentals, along with engineering considerations and applications in industry, agriculture, medicine, the environment and socio-economics, including the related government regulatory overviews. This new edition builds on the solid basis provided by previous editions, incorporating all recent advances in the field since the second edition was published in 2011. Offers researchers a one-stop shop for information on the subject of biotechnology Provides in-depth treatment of relevant topics from recognized authorities, including the contributions of a Nobel laureate Presents the perspective of researchers in different fields, such as biochemistry, agriculture, engineering, biomedicine and environmental science
Download or read book In Situ Remediation of Chlorinated Solvent Plumes written by Hans F. Stroo and published by Springer Science & Business Media. This book was released on 2010-09-10 with total page 807 pages. Available in PDF, EPUB and Kindle. Book excerpt: In the late 1970s and early 1980s, our nation began to grapple with the legacy of past disposal practices for toxic chemicals. With the passage in 1980 of the Comprehensive Envir- mental Response, Compensation, and Liability Act (CERCLA), commonly known as Sup- fund, it became the law of the land to remediate these sites. The U. S. Department of Defense (DoD), the nation’s largest industrial organization, also recognized that it too had a legacy of contaminated sites. Historic operations at Army, Navy, Air Force, and Marine Corps facilities, ranges, manufacturing sites, shipyards, and depots had resulted in widespread contamination of soil, groundwater, and sediment. While Superfund began in 1980 to focus on remediation of heavily contaminated sites largely abandoned or neglected by the private sector, the DoD had already initiated its Installation Restoration Program in the mid-1970s. In 1984, the DoD began the Defense Environmental Restoration Program (DERP) for contaminated site assessment and remediation. Two years later, the U. S. Congress codified the DERP and directed the Secretary of Defense to carry out a concurrent program of research, development, and demonstration of innovative remediation technologies. As chronicled in the 1994 National Research Council report, “Ranking Hazardous-Waste Sites for Remedial Action,” our early estimates on the cost and suitability of existing techn- ogies for cleaning up contaminated sites were wildly optimistic. Original estimates, in 1980, projected an average Superfund cleanup cost of a mere $3.
Download or read book Novel Insights into Algal Biology and Biotechnology written by Yuval Kaye and published by Frontiers Media SA. This book was released on 2019-05-23 with total page 190 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Groundwater Remediation written by Nicholas P. Cheremisinoff and published by John Wiley & Sons. This book was released on 2017-06-13 with total page 329 pages. Available in PDF, EPUB and Kindle. Book excerpt: Written by one of the world's foremost authorities on the subject, this is the most comprehensive and in-depth treatment available to environmental engineers and scientists for the remediation of groundwater, one of the earth's most precious resources. Groundwater is one of the Earth's most precious resources. We use it for drinking, bathing, and many other purposes. Without clean water, humans would cease to exist. Unfortunately, because of ignorance or lack of caring, groundwater is often contaminated through industrialization, construction or any number of other ways. It is the job of the environmental engineer to remediate the contaminated groundwater and make what has been tainted safe again.Selecting the proper remediation strategy and process is the key to moving forward, and, once this process has been selected, it must be executed properly, taking into consideration the costs, the type of contaminants that are involved, time frames, and many other factors. This volume provides a broad overview of the current and most widely applied remedial strategies. Instead of discussing these strategies in a generic way, the volume is organized by focusing on major contaminants that are of prime focus to industry and municipal water suppliers. The specific technologies that are applicable to the chemical contaminants discussed in different chapters are presented, but then cross-referenced to other chemical classes or contaminants that are also candidates for the technologies. The reader will also find extensive cost guidance in this volume to assist in developing preliminary cost estimates for capital equipment and operations & maintenance costs, which should be useful in screening strategies. The eight chapters cover all of the major various types of contaminants and their industrial applications, providing a valuable context to each scenario of contamination. This is the most thorough and up-to-date volume available on this important subject, and it is a must-have for any environmental engineer or scientist working in groundwater remediation.
Download or read book Handbook of Solvents written by George Wypych and published by ChemTec Publishing. This book was released on 2001 with total page 1446 pages. Available in PDF, EPUB and Kindle. Book excerpt: A comprehensive, extensive textual analysis of the principles of solvent selection and use, the handbook is intended to help formulators select ideal solvents, safety coordinators to protect workers, and legislators and inspectors to define and implement technically correct public safeguards for use, handling, and disposal.
Download or read book Contaminants in the Subsurface written by National Research Council and published by National Academies Press. This book was released on 2005-04-23 with total page 371 pages. Available in PDF, EPUB and Kindle. Book excerpt: At hundreds of thousands of commercial, industrial, and military sites across the country, subsurface materials including groundwater are contaminated with chemical waste. The last decade has seen growing interest in using aggressive source remediation technologies to remove contaminants from the subsurface, but there is limited understanding of (1) the effectiveness of these technologies and (2) the overall effect of mass removal on groundwater quality. This report reviews the suite of technologies available for source remediation and their ability to reach a variety of cleanup goals, from meeting regulatory standards for groundwater to reducing costs. The report proposes elements of a protocol for accomplishing source remediation that should enable project managers to decide whether and how to pursue source remediation at their sites.
Download or read book Dehalogenation written by Max M. Häggblom and published by Springer Science & Business Media. This book was released on 2007-05-08 with total page 702 pages. Available in PDF, EPUB and Kindle. Book excerpt: Halogenated organic compounds constitute one of the largest groups of environmental chemicals. The industrial production of new halogenated organic compounds has increased throughout the last century peaking in the 1960s, and continuing in widespread use today. Organohalides are integral to a variety of industrial applications, including use as solvents, degreasing agents, biocides, pharmaceuticals, plasticizers, hydraulic and heat transfer fluids, and intermediates for chemical synthesis, to name a few. It is important to recognize the beneficial aspects of halogenated organic compounds, as well as their potentially deleterious impact on the environment and health. Recognition ofthe adverse environmental effects ofmanytypes oforganohalide compounds has led to efforts to reduce or eliminate the most problematic ones. Although organohalide compounds are typically considered to be anthropogenic industrial compounds, they have their counterpart in several thousands of natural biogenic and geogenic organohalides, representing most classes of organic chemicals. Natural sources account for a significant portion of the global organohalogen budget. This volume authored by recognized experts in the field provides a current perspective on how both natural and synthetic organohalides are formed and degraded, and how these processes are incorporated into a global halogen cycle. The focus is on microbial processes, since these play a major role both in the production and degradation, i. e. , cycling of halogenated organic compounds inthe environment. This book is organized into five parts. Part I, Introduction, provides a global perspective on the issues of organohalides and their fate in the environment.
Download or read book Alternatives for Managing the Nation s Complex Contaminated Groundwater Sites written by National Research Council and published by National Academies Press. This book was released on 2013-02-27 with total page 423 pages. Available in PDF, EPUB and Kindle. Book excerpt: Across the United States, thousands of hazardous waste sites are contaminated with chemicals that prevent the underlying groundwater from meeting drinking water standards. These include Superfund sites and other facilities that handle and dispose of hazardous waste, active and inactive dry cleaners, and leaking underground storage tanks; many are at federal facilities such as military installations. While many sites have been closed over the past 30 years through cleanup programs run by the U.S. Department of Defense, the U.S. EPA, and other state and federal agencies, the remaining caseload is much more difficult to address because the nature of the contamination and subsurface conditions make it difficult to achieve drinking water standards in the affected groundwater. Alternatives for Managing the Nation's Complex Contaminated Groundwater Sites estimates that at least 126,000 sites across the U.S. still have contaminated groundwater, and their closure is expected to cost at least $110 billion to $127 billion. About 10 percent of these sites are considered "complex," meaning restoration is unlikely to be achieved in the next 50 to 100 years due to technological limitations. At sites where contaminant concentrations have plateaued at levels above cleanup goals despite active efforts, the report recommends evaluating whether the sites should transition to long-term management, where risks would be monitored and harmful exposures prevented, but at reduced costs.
Download or read book Natural Attenuation for Groundwater Remediation written by Commission on Geosciences, Environment, and Resources and published by National Academies Press. This book was released on 2000-08-31 with total page 289 pages. Available in PDF, EPUB and Kindle. Book excerpt: In the past decade, officials responsible for clean-up of contaminated groundwater have increasingly turned to natural attenuation-essentially allowing naturally occurring processes to reduce the toxic potential of contaminants-versus engineered solutions. This saves both money and headaches. To the people in surrounding communities, though, it can appear that clean-up officials are simply walking away from contaminated sites. When is natural attenuation the appropriate approach to a clean-up? This book presents the consensus of a diverse committee, informed by the views of researchers, regulators, and community activists. The committee reviews the likely effectiveness of natural attenuation with different classes of contaminants-and describes how to evaluate the "footprints" of natural attenuation at a site to determine whether natural processes will provide adequate clean-up. Included are recommendations for regulatory change. The committee emphasizes the importance of the public's belief and attitudes toward remediation and provides guidance on involving community stakeholders throughout the clean-up process. The book explores how contamination occurs, explaining concepts and terms, and includes case studies from the Hanford nuclear site, military bases, as well as other sites. It provides historical background and important data on clean-up processes and goes on to offer critical reviews of 14 published protocols for evaluating natural attenuation.
Download or read book Innovations in Biotechnology for a Sustainable Future written by Naga Raju Maddela and published by Springer Nature. This book was released on 2021-10-23 with total page 455 pages. Available in PDF, EPUB and Kindle. Book excerpt: This contributed volume compiles the latest improvements in the field of biotechnology. It focuses on topics that comprises industrial, environment, agricultural and medical related issues to technology and biological studies and exhibits the correlation between the biological world and the dependence of humans on it. The book is organized into five parts covering the role of biotechnology in industrial products, environmental remediation, agriculture and pharmacological agents. Ranging from micro-scale studies to macro, it covers a huge domain of agricultural biotechnology and focuses on important commercial crops (e.g. cacao and coffee), arbuscular mycorrhizal fungi, flow and distribution of phosphorus in agricultural soils in the Latin American region. Overall, the book portrays the importance of modern biotechnology and its role in solving the problems in modern day life. The book is a ready reference for practicing students, researchers of environmental engineering, chemical engineering, agricultural engineering, and other allied fields likewise.
