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Book Peptide Lipid Interactions

Download or read book Peptide Lipid Interactions written by Sidney A. Simon and published by Academic Press. This book was released on 2002-11-13 with total page 606 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume contains a comprehensive overview of peptide-lipid interactions by leading researchers. The first part covers theoretical concepts, experimental considerations, and thermodynamics. The second part presents new results obtained through site-directed EPR, electron microscopy, NMR, isothermal calorimetry, and fluorescence quenching. The final part covers problems of biological interest, including signal transduction, membrane transport, fusion, and adhesion. Key Features * world-renowned experts * state-of-the-art experimental methods * monolayers, bilayers, biological membranes * theoretical aspects and computer simulations * rafts * synaptic transmission * membrane fusion * signal transduction

Book Supported Lipid Bilayers and Antimicrobial Peptides

Download or read book Supported Lipid Bilayers and Antimicrobial Peptides written by Radek Macháň and published by LAP Lambert Academic Publishing. This book was released on 2012 with total page 72 pages. Available in PDF, EPUB and Kindle. Book excerpt: Supported lipid bilayers have been used as an artificial model of biological membranes and their interaction with 5 selected antimicrobial peptides was studied by several experimental techniques, mainly ellipsometry, laser scanning microscopy and fluorescence correlation spectroscopy. The work explains basic principles of the applied techniques focusing on their aspects relevant to characterization of lipid bilayers. The biological significance of antimicrobial peptides, their modes of interaction with membranes and the basic characteristics of the selected peptides are briefly discussed. The following text describes the main types of experimental studies performed and the interpretation of their results. Peptide-induced changes in lipid bilayer morphology were characterized by ellipsometry and laser scanning microscopy. Most interesting effects were observed in the case of melittin, which induced formation of long lipid tubules protruding from the bilayer. Lipid lateral diffusion measured by fluorescence correlation spectroscopy can provide information on bilayer organization on length-scales below resolution of optical microscopy.

Book The Action of Antimicrobial Peptides on Supported Lipid Bilayers Investigated by Biophysical Methods

Download or read book The Action of Antimicrobial Peptides on Supported Lipid Bilayers Investigated by Biophysical Methods written by Stefania Piantavigna and published by . This book was released on 2014 with total page 738 pages. Available in PDF, EPUB and Kindle. Book excerpt: The emergence of bacteria that have developed resistance towards "traditional" antibiotics is becoming a serious global health threat. Consequently, alternative approaches are needed to find new drugs that can act directly as antibiotics or to assist traditional drugs to improve efficacy. The emergence of antimicrobial peptides (AMPs) as a possible new class offers promise. AMPs represent a large and varied group of "natural antibiotics" present in virtually every organism. However, in order to develop new drugs derived from AMPs knowledge of the bioactivity of these is needed, such as concentration ranges and specific bacterial targets. Of great practical importance is to have a comprehensive understanding of the mechanism of action of AMPs, so that the risk of cross-reactivity and development of new bacterial resistance is minimised. All AMPs interact with the cell membrane, which is a complex and dynamic system, mostly containing phospholipids and proteins. Phospholipids are not simple "bricks" of the membrane, but they themselves are involved in various cellular processes. Therefore, biomimetic membranes, e.g. supported lipid bilayers (SLBs), represent a valid approach for investigating the interactions between lipids and AMPs. Creation of a supported membrane reduces the complexity of those studies to just one variable. Many variables influence the formation of SLBs and a protocol regarding the formation of SLBs assembled on gold-coated sensors is described in Paper 1. The membrane deposition and the peptide-membrane interactions were investigated using a Quartz Crystal Microbalance with Dissipation monitoring (QCM-D) (Paper 2). Thus, the action of various peptides were investigated with zwitterionic membranes, which contained negatively charged lipid (bacterial membranes), or cholesterol (mammalian membranes).The action of the two most widely studied AMPs, melittin and magainin 2, on SLBs, has been examined using QCM-D in Chapter 3. These peptides formed "toroidal pores", which lead to membrane disruption. However, the action of these peptides has been found to be both concentration and composition dependent.Many AMPs are enriched in a particular amino acid residue. The influence of several of these peptide residues has been investigated using QCM-D in Chapters 4, 5 and 6. The action of proline-rich peptides apidaecins HbI and HbII, the variant Api88 and oncocin peptides on SLBs, are illustrated in Papers 3, 4 and 5, respectively. These peptides were found to insert into the membrane without any evidence of disruption. The influence of lipid composition on the activity of the arginine-rich peptide Tat has also been investigated with QCM together with scanning electrochemical microscopy (SECM) (Chapter 5). The cell-penetrating Tat peptide was shown to act as a lytic AMP in the presence of negatively charged membranes (Papers 6 and 7).The addition of tryptophan residues in the sequence of a short arginine-rich peptide, (RW)3, caused a dramatic switch from cell penetrating to lytic activity, while the inclusion of ruthenocene in the peptide RcCO-W(RW)2 did not affect the peptide activity (Chapter 6).Finally, in Chapter 7, Uperin 3.5, an amyloid-like AMP, demonstrated that the amyloid fibrils are not necessary for the membrane-disruption. However, the action of Uperin 3.5 towards zwitterionic membranes is switched to insertion if cholesterol is present in the membrane. Thus, QCM has been demonstrated to be an invaluable technique for characterising, in real time, the action of various peptides on SLBs of bacterial mimetic composition and mammalian. However, the combination of QCM with other techniques e.g. SECM, is always encouraged to reinforce this data and to gain a wide perspective of activity.

Book Interaction of Antimicrobial Peptides with Model Lipid Membranes

Download or read book Interaction of Antimicrobial Peptides with Model Lipid Membranes written by Ahmad Arouri and published by . This book was released on 2009 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: The antimicrobial resistance is a growing problem that threatens our ability to treat infections and urges the need to develop novel alternatives for "conventional" antibiotics which are less susceptible for the development of bacterial resistance. Antimicrobial peptides (AMPs) are among the most promising candidates. This is due to their ability to disturb biological membranes via non-specific interactions with the membrane lipid components. In spite of the significant amount of experimental data, many of the issues concerning AMPs are still not well understood. This includes their molecular-based mechanism of action, the role of the membrane architecture, the importance of the structure and properties of the antimicrobial peptides, the extent and significance of the pore formation and membrane micellization processes, and others. We utilized several biophysical techniques, mainly DSC, ITC, DLS, IRRAS, FT-IR, and epifluorescence microscopy, to study the interaction of synthetic AMPs with various model lipid membranes of different composition. In this work two groups of AMPs were used: 1) KLA peptides with different helical propensities, and 2) a linear and a cyclic arginine- and tryptophan-rich antimicrobial hexapeptide with identical amino acid sequences (Ac-RW and C-RW, respectively). Phosphatidylglycerol (PG), phosphatidylethanolamine (PE) and PG/PE mixtures were used to model the cytoplasmic bacterial membrane, whereas phosphatidylcholine (PC) was used to model the outer leaflet of mammalian membranes. Our aim was to investigate the interplay between the peptide conformation, the membrane composition and properties, and the experimental conditions, as well as the role of membrane composition in modulating the activity of the peptides. In addition, an attempt was made to explain the bioactivity of these peptides in the light of the experimental results using model membranes. This study enriches our knowledge and understanding of the complicated interaction between AMP and model membranes. The coupling of various biophysical techniques is very beneficial to get insight into the studied systems from different perspectives as well as to check any variation in experimental results due to different techniques. Our findings emphasize the importance of the peptide conformation and local concentration in determining the mode of action of the peptides. Also, the findings show that a phenomenon observed with certain lipid membranes, preparation procedures, and experimental conditions cannot necessarily be generalized.

Book Antimicrobial Peptides

    Book Details:
  • Author : Katsumi Matsuzaki
  • Publisher : Springer
  • Release : 2019-04-12
  • ISBN : 9811335885
  • Pages : 304 pages

Download or read book Antimicrobial Peptides written by Katsumi Matsuzaki and published by Springer. This book was released on 2019-04-12 with total page 304 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents an overview of antimicrobial peptides (AMPs), their mechanisms of antimicrobial action, other activities, and various problems that must still be overcome regarding their clinical application. Divided into four major parts, the book begins with a general overview of AMPs (Part I), and subsequently discusses the various mechanisms of antimicrobial action and methods for researching them (Part 2). It then addresses a range of activities other than antimicrobial action, such as cell penetration, antisepsis, anticancer, and immunomodulatory activities (Part 3), and explores the prospects of clinical application from various standpoints such as the selective toxicity, design, and discovery of AMPs (Part 4). A huge number of AMPs have been discovered in plants, insects, and vertebrates including humans, and constitute host defense systems against invading pathogenic microorganisms. Consequently, many attempts have been made to utilize AMPs as antibiotics. AMPs could help to solve the urgent problem of drug-resistant bacteria, and are also promising with regard to sepsis and cancer therapy. Gathering a wealth of information, this book will be a bible for all those seeking to develop antibiotics, anti-sepsis, or anticancer agents based on AMPs.

Book Advances in Computational Biology

Download or read book Advances in Computational Biology written by Luis F. Castillo and published by Springer Science & Business Media. This book was released on 2013-08-04 with total page 393 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume compiles accepted contributions for the 2nd Edition of the Colombian Computational Biology and Bioinformatics Congress CCBCOL, after a rigorous review process in which 54 papers were accepted for publication from 119 submitted contributions. Bioinformatics and Computational Biology are areas of knowledge that have emerged due to advances that have taken place in the Biological Sciences and its integration with Information Sciences. The expansion of projects involving the study of genomes has led the way in the production of vast amounts of sequence data which needs to be organized, analyzed and stored to understand phenomena associated with living organisms related to their evolution, behavior in different ecosystems, and the development of applications that can be derived from this analysis.

Book Lipid Bilayers

    Book Details:
  • Author : J. Katsaras
  • Publisher : Springer Science & Business Media
  • Release : 2013-06-29
  • ISBN : 366204496X
  • Pages : 304 pages

Download or read book Lipid Bilayers written by J. Katsaras and published by Springer Science & Business Media. This book was released on 2013-06-29 with total page 304 pages. Available in PDF, EPUB and Kindle. Book excerpt: Provides the reader with an up to date insight of the current state of the art in the field of lipid bilayer research and the important insights derived for the understanding of the complex and varied behaviour of biological membranes and its function.

Book Kinetics of the Interaction of the Antimicrobial Peptide Cecropin A with Model Lipid Bilayer Membranes

Download or read book Kinetics of the Interaction of the Antimicrobial Peptide Cecropin A with Model Lipid Bilayer Membranes written by Allison Christine Cavenaugh and published by . This book was released on 2005 with total page 20 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book The Mechanism of Lipid Bilayer Disruption by the Human Antimicrobial Peptide  LL 37

Download or read book The Mechanism of Lipid Bilayer Disruption by the Human Antimicrobial Peptide LL 37 written by Katherine Anne Henzler Wildman and published by . This book was released on 2003 with total page 660 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book Peptide and Protein Interaction with Membrane Systems

Download or read book Peptide and Protein Interaction with Membrane Systems written by Sara Bobone and published by Springer. This book was released on 2014-05-31 with total page 147 pages. Available in PDF, EPUB and Kindle. Book excerpt: In her thesis, Sara Bobone outlines spectroscopic studies of antimicrobial peptides (AMPs) which are promising lead compounds for drugs used to fight multidrug resistant bacteria. Bobone shows that AMPs interact with liposomes and she clarifies the structure of pores formed by one of these molecules. These results help us to understand how AMPs are selective for bacterial membranes and how their activity can be finely tuned by modifying their sequence. Findings which solve several conundrums debated in the literature for years. In addition, Bobone uses liposomes as nanotemplates for the photopolymerization of hydrogels - exploiting the self- assembly properties of phospholipids. Bobone was able to trap an enzyme using nanometeric particles, while still allowing its activity by the diffusion of substrates and products through the network of the polymer. The innovative nano devices described in this thesis could solve many of the hurdles still hampering the therapeutic application of protein-based drugs.

Book Drug   biomembrane interaction studies

Download or read book Drug biomembrane interaction studies written by T. Musumeci and published by Elsevier Inc. Chapters. This book was released on 2013-10-31 with total page 24 pages. Available in PDF, EPUB and Kindle. Book excerpt: Antimicrobial agents are from different classes of molecules that suppress multiplication and growth of or kill microorganisms such as bacteria, fungi, or viruses. The precise mechanism of action of some antimicrobial agents is unknown but they must interact with or cross the cell membrane to have an effect. Identification of the damage induced by these compounds is difficult due to the complexity of cell membranes. Studying interactions using membrane models is a first step in obtaining elementary information about the effects of such drugs. We discuss interaction studies in the recent literature that use calorimetric techniques, regarding the mechanism of action or side effects of antimicrobial agents. For interaction studies with mimetic membrane models using DSC analysis, we will try to answer some key questions: (a) Does lipid composition affect the interaction? (b) Does the composition of bilayers influence the secondary structure of a peptide antimicrobial? (c) Does lipid polymorphism influence the activity and toxicity of the molecules? We underline the importance of phospholipids (neutral or anionic) chosen to produce biomembrane vesicles as models for the different studies.

Book Advances in Planar Lipid Bilayers and Liposomes

Download or read book Advances in Planar Lipid Bilayers and Liposomes written by Ales Iglic and published by Academic Press. This book was released on 2012-09-04 with total page 358 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in Planar Lipid Bilayers and Liposomes volumes cover a broad range of topics, including main arrangements of the reconstituted system, namely planar lipid bilayers as well as spherical liposomes. The invited authors present the latest results of their own research groups in this exciting multidisciplinary field. Incorporates contributions from newcomers and established and experienced researchers Explores the planar lipid bilayer systems and spherical liposomes from both theoretical and experimental perspectives Serves as an indispensable source of information for new scientists

Book Giant Vesicles

    Book Details:
  • Author : Pier Luigi Luisi
  • Publisher : John Wiley & Sons
  • Release : 2008-04-30
  • ISBN : 0470511524
  • Pages : 426 pages

Download or read book Giant Vesicles written by Pier Luigi Luisi and published by John Wiley & Sons. This book was released on 2008-04-30 with total page 426 pages. Available in PDF, EPUB and Kindle. Book excerpt: Perspectives in Supramolecular Chemistry Founded by J.-M. Lehn Perspectives in Supramolecular Chemistry reflects research which develops supramolecular structures with specific new properties, such as recognition, transport and simulation of biosystems or new materials. The series covers all areas from theoretical and modelling aspects through organic and inorganic chemistry and biochemistry to materials, solid-state and polymer sciences reflecting the many and varied applications of supramolecular structures in modern chemistry. Giant Vesicles Edited by Pier Luigi Luisi and Peter Walde Institute für Polymere, ETH-Zürich, Switzerland Giant vesicles or giant liposomes are supramolecular assembles of amphiphiles, surface active substances which normally contain one or two hydrophobic chains and one hydrophilic head. Due to their relatively large size, giant vesicles are easily observed by light microscopy. This volume provides an overview of ideas and results obtained from experimental studies as well as theoretical approaches. A wide variety of aspects ranging from pure mathematics and physical considerations to biochemical and biological applications are covered. Historical and fundamental aspects are discussed as well as a range of experimental approaches including the micromanipulation and micro-puncturing of single giant vesicles. 87 international contributors comment on a wide range of issues contained under the five main part headings: Introduction Preparation Methods Basic Theoretical Aspects Physical Properties Chemical and Biological Aspects. Giant Vesicles has been written for researchers in the fields of chemistry, biochemistry and biophysics, working in supra-molecular chemistry, surfactant science, liposome and pharmaceutical sciences.

Book Insect Immunity

    Book Details:
  • Author : Dan Hultmark
  • Publisher :
  • Release : 1982
  • ISBN :
  • Pages : 98 pages

Download or read book Insect Immunity written by Dan Hultmark and published by . This book was released on 1982 with total page 98 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book Biomembranes

    Book Details:
  • Author : Robert B. Gennis
  • Publisher : Springer Science & Business Media
  • Release : 2013-04-17
  • ISBN : 1475720653
  • Pages : 549 pages

Download or read book Biomembranes written by Robert B. Gennis and published by Springer Science & Business Media. This book was released on 2013-04-17 with total page 549 pages. Available in PDF, EPUB and Kindle. Book excerpt: New textbooks at all levels of chemistry appear with great regularity. Some fields like basic biochemistry, organic reaction mechanisms, and chemical thermody namics are well represented by many excellent texts, and new or revised editions are published sufficiently often to keep up with progress in research. However, some areas of chemistry, especially many of those taught at the graduate level, suffer from a real lack of up-to-date textbooks. The most serious needs occur in fields that are rapidly changing. Textbooks in these subjects usually have to be written by scientists actually involved in the research which is advancing the field. It is not often easy to persuade such individuals to set time aside to help spread the knowledge they have accumulated. Our goal, in this series, is to pinpoint areas of chemistry where recent progress has outpaced what is covered in any available textbooks, and then seek out and persuade experts in these fields to produce relatively concise but instructive introductions to their fields. These should serve the needs of one semester or one quarter graduate courses in chemistry and biochemistry. In some cases, the availability of texts in active research areas should help stimulate the creation of new courses.