Download or read book Fundamentals of Systems Analysis and Modeling of Biosystems and Metabolism written by Kazuyuki Shimizu and published by Bentham Science Publishers. This book was released on 2015-06-04 with total page 343 pages. Available in PDF, EPUB and Kindle. Book excerpt: An understanding of biological systems at cellular and molecular levels helps researchers to model cellular behavior in different experimental conditions. This, in turn, can lead to insights about the influence of cell culture environment and the effect of knockout gene research when studying mutations that affect specific metabolic pathways. A systems biology approach, therefore, allows researchers to simulate experimental observations in order to predict outcomes at the cellular level. Fundamentals of Systems Analysis and Modeling of Biosystems and Metabolism presents the basic concepts required for a systems biology approach towards cellular modeling. The book is intended as a primer for systems biology and biomedical engineering graduates and researchers. The text introduces readers to concepts related to cellular metabolism and its regulation, (enzymatic regulation and transcriptional regulation) which are also incorporated into a main metabolic model of a cell. The book also has chapters dedicated to identifying and incorporating steady-state and dynamic characteristics when considering a biological model for a computer simulation. Readers will be able to (1) understand the basis of systems analysis towards creating appropriate biological models and simulations, (2) develop useful kinetic models based on cellular transport phenomena and metabolic regulation, (3) understand how to simulate a cell growth phenotype, and analyze it with experimental data.
Download or read book Metabolic Regulation and Metabolic Engineering for Biofuel and Biochemical Production written by Kazuyuki Shimizu and published by CRC Press. This book was released on 2017-07-12 with total page 408 pages. Available in PDF, EPUB and Kindle. Book excerpt: The global warming problem is becoming critical year by year, causing climate disaster all over the world, where it has been believed that the CO2 gas emitted from the factories and the burning of fossil fuels may be one of the reasons of global warming. Moreover, the global stock of fossil fuels is limited, and may run out soon within several tens of years. Although wind, geo-thermal, and tide energies have been considered as clean energy sources, those depend on the land or sea locations and subject to the climate change. Biofuel and biochemical production from renewable bio-resources has thus been paid recent attention from environmental protection and energy production points of view, where the current chemical and energy producing plants can be also utilized with slight modification. The so-called 1st generation biofuels have been produced from corn starch and sugarcane in particular in USA and Brazil. However, this causes the problem of the so-called "food and energy issues" as the production scale increases. The 2nd generation biofuel production from lingo-cellulosic biomass or wastes has thus been paid recent attention. However, it requires energy intensive pretreatment for the degradation of lingo-cellulosic biomass, and the fermentation is slow due to low growth rate, and thus the productivity of biofuels and bio-chemicals is low. The 3rd generation biofuel production from photosynthetic organisms such as cyanobacteria and algae has been also paid attention, because such organisms can grow with only sun light and CO2 in the air, but the cell growth rate and thus the productivity of the fuels is significantly low. The main part or core of such production processes is the fermentation by micro-organisms. In particular, it is critical to properly understand the cell metabolism followed by the efficient metabolic engineering. The book gives comprehensive explanation of the cell metabolism and the metabolic regulation mechanisms of a variety of micro-organisms. Then the efficient metabolic engineering approaches are explained to properly design the microbial cell factories for the efficient cell growth and biofuel and biochemical production.
Download or read book Applied Bioengineering written by Toshiomi Yoshida and published by John Wiley & Sons. This book was released on 2017-01-12 with total page 656 pages. Available in PDF, EPUB and Kindle. Book excerpt: A comprehensive overview of the topic, highlighting recent developments, ongoing research trends and future directions. Experts from Europe, Asia and the US cover five core areas of imminent importance to the food, feed, pharmaceutical and water treatment industries in terms of sustainable and innovative processing and production. In the field of enzyme engineering, they summarize historic developments and provide an overview of molecular enzyme engineering, while also discussing key principles of microbial process engineering, including chapters on process development and control. Further sections deal with animal and plant cell culture engineering. The final section of the book deals with environmental topics and highlights the application of bioengineering principles in waste treatment and the recovery of valuable resources. With its cutting-edge visions, extensive discussions and unique perspectives, this is a ready reference for biotechnologists, bioengineers, bioengineers, biotechnological institutes, and environmental chemists.
Download or read book Environmental Health Perspectives written by and published by . This book was released on 1993 with total page 182 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Lu s Basic Toxicology written by Byung-Mu Lee and published by CRC Press. This book was released on 2017-09-07 with total page 570 pages. Available in PDF, EPUB and Kindle. Book excerpt: Continuing a long tradition, Lu‘s Basic Toxicology, Seventh Edition, provides guidance on principles of toxicology and testing procedures for toxicities as well as a concise yet detailed mechanism of both target organ and non-target organ toxicities. The book also addresses the toxic effects of chemicals and risk assessment, giving students and practicing toxicologists, the tools to enhance their practice. This edition includes new chapters on Systems Toxicology, Chemicals and Children, Toxicology of Reproductive Systems, providing the essentials of these topics in the same style as other chapters in the book. Separate subject and chemical indexes make this a useful, quick shelf reference.
Download or read book Bioinstrumentation written by John G. Webster and published by John Wiley & Sons. This book was released on 2003-08-18 with total page 406 pages. Available in PDF, EPUB and Kindle. Book excerpt: Addresses measurements in new fields such as cellular and molecular biology. Equips readers with the necessary background in electric circuits. Statistical coverage shows how to determine trial sizes.
Download or read book Applied Pharmacometrics written by Stephan Schmidt and published by Springer. This book was released on 2014-12-01 with total page 570 pages. Available in PDF, EPUB and Kindle. Book excerpt: This comprehensive volume provides an update on the current state of pharmacometrics in drug development. It consists of nineteen chapters all written by leading scientists from the pharmaceutical industry, regulatory agencies and academia. After an introduction of the basic pharmacokinetic and pharmacodynamic concepts of pharmacometrics in drug development, the book presents numerous examples of specific applications that utilize pharmacometrics with modeling and simulations over a variety of therapeutic areas, including pediatrics, diabetes, obesity, infections, psychiatrics, Alzheimer’s disease, and dermatology, among others. The examples illustrate how results from all phases of drug development can be integrated in a more timely and cost-effective process. Applying pharmacometric decision tools during drug development can allow objective, data-based decision making. At the same time, the process can identify redundant or unnecessary experiments as well as some costly clinical trials that can be avoided. In addition to cost saving by expedited development of successful drug candidates, pharmacometrics has an important economic impact in drug product selection. Unsuccessful drug candidates can be identified early and discontinued without expending efforts required for additional studies and allocating limited resources. Hence, pharmacometric modeling and simulation has become a powerful tool to bring new and better medications to the patient at a faster pace and with greater probability of success.
Download or read book Bioreactor Modeling written by Jerome Morchain and published by Elsevier. This book was released on 2017-10-06 with total page 220 pages. Available in PDF, EPUB and Kindle. Book excerpt: Dynamic simulation of bioreactors is a challenge for both the industrial and academic worlds. Beyond the large number of physical and biological phenomena to be considered and the wide range of scales involved, the central difficulty lies in the need to account for the dynamic behavior of suspended microorganisms. In the case of chemical reactors, knowledge of the thermodynamic equilibrium laws at the interfaces makes it possible to produce macroscopic models by integrating local laws. Microorganisms, on the other hand, have the ability to modulate the rate of substrate assimilation. Moreover, the nature of the biochemical transformations results from a compromise between the needs of the cell and the available resources. This book revisits the modeling of bioreactors using a multi-scale approach. It addresses issues related to mixing, phase-to-phase transfers and the adaptation of microorganisms to variations in concentration, and explores the use of population balances for the simulation of bioreactors. By adopting a multidisciplinary perspective that draws on process engineering, fluid mechanics and microbiology, this book sheds new light on the particularity of bioprocesses in relation to physical and chemical phenomena. - Presents a multiphase description of bioreactor modeling - Includes a combination of concepts issued from different scientific fields to address a practical issue - Provides a detailed description of the population balance concept as applied to biological systems - Covers a set of illustrative examples of the interaction between hydrodynamics and biological response
Download or read book Dynamic Biosystem Modeling Simulation Methodology Integrated Accessible written by Joseph Distefano, 3rd and published by . This book was released on 2019-09-16 with total page 354 pages. Available in PDF, EPUB and Kindle. Book excerpt: This textbook is uniquely crafted for use in teaching undergraduate students in the life, math, computer and other sciences and engineering. It is INTRODUCTORY LEVEL, for students who have taken or are currently completing their undergraduate math requirements, and are acquiring analytical-thinking and doing skills, along with introductory biology, chemistry and physics subject matter. It's about learning HOW to model and simulate dynamic biological systems, which also makes it useful for graduate students and professional researchers who want a more rigorous treatment of introductory life science math modeling, integrated with the biology. It brings together the multidisciplinary pedagogy of these subjects into a SINGLE INTRODUCTORY MODELING METHODOLOGY COURSE, crystalizing the experience of an author who has been teaching dynamic biosystems modeling and simulation methodology for the life sciences for more than 50 years. DiStefano maximizes accessibility and "systems-math-biology" integration - without diminishing conceptual rigor. Minimally essential applied math and SYSTEMS ENGINEERING METHODS are included, along with a synopsis of the biology and physiology underlying dynamic biosystem modeling, all in a modeling pedagogy context. This textbook fills a major need in the training of contemporary biology students.Dynamic biosystems modeling methodology is presented over 12 distinctive chapters, primarily with systems diagrams and simple differential equations and algebra for expressing them quantitatively, integrated with the biology. Solving and analyzing (quantifying) the biomodels are then accomplished by simulation, using a facile control system simulation language Simulink, a GUI/Matlab toolbox that emulates control systems diagramming, rather than by "coding" the model in a standard computer programming language. Students see and work with the system model - not the code - a big plus. Higher math and complex analytical solutions are avoided.Each chapter begins with a list of LEARNING GOALS, to help with both perspective for the chapter material, and retrospective, to measure learning. EXERCISES for the student at the end of each chapter are designed to test and reinforce learning. A SOLUTIONS MANUAL for chapter exercises is available to qualified instructors from the author, as are LECTURE SLIDES and LAB ASSIGNMENTS AND SOLUTIONS, for courses that adopt the textbook for student use.
Download or read book Undergraduate and Graduate Courses and Programs written by Iowa State University and published by . This book was released on 2009 with total page 452 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Uncertainty Modeling in Vibration Control and Fuzzy Analysis of Structural Systems written by Bilal M. Ayyub and published by World Scientific. This book was released on 1997 with total page 382 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book gives an overview of the current state of uncertainty modeling in vibration, control, and fuzzy analysis of structural and mechanical systems. It is a coherent compendium written by leading experts and offers the reader a sampling of exciting research areas in several fast-growing branches in this field. Uncertainty modeling and analysis are becoming an integral part of system definition and modeling in many fields. The book consists of ten chapters that report the work of researchers, scientists and engineers on theoretical developments and diversified applications in engineering systems. They deal with modeling for vibration, control, and fuzzy analysis of structural and mechanical systems under uncertain conditions. The book designed for readers who are familiar with the fundamentals and wish to study a particular topic or use the book as an authoritative reference. It gives readers a sophisticated toolbox for tackling modeling problems in mechanical and structural systems in real-world situations. The book is part of a series on Stability, Vibration and Control of Structures, and provides vital information in these areas.
Download or read book Membrane Computing written by Erzsebet Csuhaj-Varju and published by Springer. This book was released on 2013-02-26 with total page 435 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the thoroughly refereed post-conference proceedings of the 13th International Conference on Membrane Computing, CMC 2012, held in Budapest, Hungary, in August 2012. The 21 revised selected papers presented together with 6 invited lectures were carefully reviewed and selected from 25 papers presented at the conference. The book also deals with membrane systems, also called P systems, which are distributed and parallel algebraic models processing multisets of objects in a localized manner (evolution rules and evolving objects are encapsulated into compartments delimited by membranes), with an essential role played by the communication among compartments and with the environment.
Download or read book Tracer Kinetics in Biomedical Research written by Claudio Cobelli and published by Springer Science & Business Media. This book was released on 2007-05-08 with total page 455 pages. Available in PDF, EPUB and Kindle. Book excerpt: 1. Introduction. 2. Fundamentals of Tracer Kinetics. 3. The Noncompartmental Model of Multipool Systems. 4. The Compartmental Model. 5. Identifiability of the Tracer Model. 6. Using the Tracer Model to Estimate Kinetic Parameters. 7. Compartmental Versus Noncompartmental Kinetic Parameters. 8. Parameter Estimation: Some Fundamentals of Regression Analysis. 9. Parameter Estimation in Noncompartmental Models. 10. Parameter Estimation in Compartmental Models. 11. Precursor-Product Models. Appendices. Index.
Download or read book Biological Reaction Engineering written by Elmar Heinzle and published by John Wiley & Sons. This book was released on 2021-04-14 with total page 560 pages. Available in PDF, EPUB and Kindle. Book excerpt: This practical book presents the modeling of dynamic biological engineering processes in a readily comprehensible manner, using the unique combination of simplified fundamental theory and direct hands-on computer simulation. The mathematics is kept to a minimum, and yet the 60 examples illustrate almost every aspect of biological engineering science, with each one described in detail, including the model equations. The programs are written in the modern user-friendly simulation language Berkeley Madonna, which can be run on both Windows PC and Power-Macintosh computers. Madonna solves models comprising many ordinary differential equations using very simple programming, including arrays. It is so powerful that the model parameters may be defined as "sliders", which allow the effect of their change on the model behavior to be seen almost immediately. Data may be included for curve fitting, and sensitivity or multiple runs may be performed. The results can be viewed simultaneously on multiple-graph windows or by using overlays. The examples can be varied to fit any real situation, and the suggested exercises provide practical guidance. The extensive teaching experience of the authors is reflected in this well-balanced presentation, which is suitable for the teacher, student, biochemist or the engineer.
Download or read book Hormone Action written by Robert F. Goldberger and published by Springer Science & Business Media. This book was released on 2013-11-21 with total page 354 pages. Available in PDF, EPUB and Kindle. Book excerpt: The motivation for us to conceive this series of volumes on regulation was mainly our belief that it would be fun, and at the same time productive, to approach the subject in a way that differs from that of other treatises. We thought it might be interesting and instructive for both author and reader-to examine a particular area of investigation in a framework of many different problems. Cutting across the traditional boundaries that have separated the subjects in past volumes on regulation is not an easy thing to do-not because it is difficult to think of what interesting topics should replace the old ones, but because it is difficult to find authors who are willing to write about areas outside those pursued in their own laboratories. Anyone who takes on the task of reviewing a broad area of interest must weave together its various parts by picking up the threads from many different laboratories, and attempt to produce a fabric with a meaningful design. Finding persons who are likely to succeed in such a task was the most difficult part of our job. In the first volume of this treatise, most of the chapters dealt with the mechanisms of regulation of gene expression in microorganisms. The second volume involved a somewhat broader area, spanning the prokaryotic-eukaryotic border. Topics ranged from phage morphogenesis to the role of gradients in development. This third volume-Volume 3A concerns hormones, as does the forthcoming companion volume-Volume 3B.
Download or read book Cumulated Index Medicus written by and published by . This book was released on 1977 with total page 904 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Infobiotics written by Vincenzo Manca and published by Springer Science & Business Media. This book was released on 2013-03-12 with total page 395 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book presents topics in discrete biomathematics. Mathematics has been widely used in modeling biological phenomena. However, the molecular and discrete nature of basic life processes suggests that their logic follow principles that are intrinsically based on discrete and informational mechanisms. The ultimate reason of polymers, as key element of life, is directly based on the computational power of strings, and the intrinsic necessity of metabolism is related to the mathematical notion of multiset. The switch of the two roots of bioinformatics suggests a change of perspective. In bioinformatics, the biologists ask computer scientists to assist them in processing biological data. Conversely, in infobiotics mathematicians and computer scientists investigate principles and theories yielding new interpretation keys of biological phenomena. Life is too important to be investigated by biologists alone, and though computers are essential to process data from biological laboratories, many fundamental questions about life can be appropriately answered by a perspicacious intervention of mathematicians, computer scientists, and physicists, who will complement the work of chemists, biochemists, biologists, and medical investigators. The volume is organized in seven chapters. The first part is devoted to research topics (Discrete information and life, Strings and genomes, Algorithms and Biorhythms, Life Strategies), the second one to mathematical backgrounds (Numbers and Measures, Languages and Grammars, Combinations and Chances).
