Download or read book Effects of Mutations in GH3 Genes on the Interaction Between the Necrotrophic Fungus Macrophomina Phaseolina and Its Plant Host Arabidopsis Thaliana written by Jordan Brungardt and published by . This book was released on 2014 with total page 66 pages. Available in PDF, EPUB and Kindle. Book excerpt: The necrotrophic soil-borne fungus Macrophomina phaseolina (Tassi) Goid (M. phaseolina) causes the disease charcoal rot in a wide range of plant species worldwide. Many of these species are agronomically important. Attempts to control the disease have been met with little success. Expression of auxin-regulating GH3 genes have been shown to be up-regulated in Medicago plants upon infection with M. phaseolina. Other studies have shown that GH3 knockout mutants have increased resistance to necrotrophic fungal pathogens such as Botrytis cinerea. Based on our previous research, we hypothesized that mutations in GH3 genes in the plant host Arabidopsis thaliana (A. thaliana) would decrease the aggressiveness of M. phaseolina. The research presented here investigates this interaction in an attempt to elucidate the importance of GH3 genes in the disease response pathway. To assess this, available insertion mutants for seven group II GH3 genes of A. thaliana were included in this study. Since GH3 is a multi-gene family and some genes may have functional redundancy, double mutants for two pairs of closely related genes were generated. Homozygous mutants for four of the seven insertion lines were established. Despite being prevalent in other research, homozygosity was unattainable for three of the mutant lines (gh3.2, gh3.4, and gh3.6). The gh3.6 line was found to have an inverted tandem repeat of the T-DNA insert. Although obvious phenotypic differences were present for all the lines, three of the four homozygous lines produced their respective mRNA based on RT-PCR; therefore, they are most likely not a knockout of their perspective gene. The disease phenotypes of these mutant lines were compared to that of the wild type. With three repeats of inoculation, it was concluded that these lines showed no increased resistance to M. phaseolina. Given the data presented here, it is likely GH3 genes play no major role in the pathogenicity of M. phaseolina on the model plant A. thaliana.
Download or read book Study of Charcoal Rot Disease Using the Model Plant Arabidopsis Thaliana written by Priya Fernandes and published by . This book was released on 2013 with total page 83 pages. Available in PDF, EPUB and Kindle. Book excerpt: Macrophomina phaseolina is a warm climate fungal pathogen of the Botryosphaeriaceae family that causes charcoal rot disease in over 700 plant species including commercially grown plants such as soybean, maize, peanut and cotton. Currently used management approaches for the disease including irrigation, addition of organic amendments and crop rotation are not very effective. Limited knowledge on host-pathogen interactions hinders the development of disease resistance strain by genetic engineering. To understand the disease mechanisms at the molecular level, we chose to use Arabidopsis thaliana as a model to study charcoal rot. In this study we established Arabidopsis as a susceptible host for Macrophomina phaseolina. Furthermore, the cellular process of infection and propagation of the pathogen within the host system during the early and late stages of infection were examined by microscopy. Recent studies have demonstrated the crucial roles of different phytohormones in the induction of defense signaling pathways. Here, the interactions between plant hormone-mediated signaling and plant disease resistance were studied using a genetics approach with a hope of understanding the mechanisms of plant immunity against Macrophomina phaseolina mediated by auxin, SA, JA, ET and ABA. In this study we hypothesized that the necrotrophic fungus M. phaseolina invades the host by affecting the biosynthesis of plant hormones (mainly JA, ET and auxin) and/or activation of the corresponding hormonal pathways that are directly or indirectly involved in mounting a defense response against the pathogen. Several mutants that carry mutations in genes that are involved in hormone biosynthesis or signaling were obtained and tested. Results from our study showed that auxin, ET and SA signaling pathways have possible roles of in imparting pathogen resistance against M. phaseolina.
Download or read book The Interaction of Natural Variation in a Necrotrophic Fungal Pathogen Botrytis Cinerea with Plant Defense in the Arabidopsis Thaliana Model System written by Heather Cristina Rowe and published by . This book was released on 2008 with total page 488 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Genome Scale Analysis of Arabidopsis Thaliana Quantitative Disease Resistance to the Generalist Fungal Pathogen Sclerotinia Sclerotiorum written by Thomas Badet and published by . This book was released on 2017 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: In nature, plant pathogen interactions are frequent but disease is not the most prevalent outcome. Indeed, plants evolved an efficient immune system able to face multiple pathogen attacks. Getting insights into plant microbe interactions at multiple levels will improve our understanding of how plants defend against pathogens and help building sustainable agronomy. Fungal plant pathogens are major threats to food security worldwide. Sclerotinia sclerotiorum is an Ascomycete generalist plant pathogen causing mold diseases on hundreds of plant species. There is no genetic source of complete plant resistance to this generalist pathogen known to date. Instead, natural plant populations show a continuum of resistance levels controlled by multiple genes, a phenotype designated as quantitative disease resistance (QDR). Little is known about the molecular mechanisms controlling the interaction between plants and S. sclerotiorum, and more generally which are the molecular bases underlying QDR in plants. My thesis project consisted in a first part in identifying molecular mechanisms underlying QDR to S. sclerotiorum in natural accessions of the model plant Arabidopsis thaliana. A Genome wide association study (GWAS) allowed me to associate genetic variation with disease resistance to S. sclerotiorum. The analysis pinpointed three genes in A. thaliana genome as putative candidates involved in QDR to S. sclerotiorum. I led the functional characterization of these genes and investigated natural diversity at these loci. The results revealed that a prolyl-oligopeptidase (POQR) and an actin-related protein complex member (ARPC4) are associated with QDR against S. sclerotiorum. The analysis of actin filament networks highlighted their role in response to S. sclerotiorum. Furthermore, I showed that POQR alleles evolved convergently in different plant lineages, suggesting that some QDR molecular mechanisms are conserved across plants. Among fungal parasites, some like S. sclerotiorum are able to infect multiple species while others are restricted to one or few hosts. In the second part of the project, I investigated the properties of S. sclerotiorum genome associated to its ability to infect hundreds of plant species. Theory predicts that generalism comes at a cost and may underlie important fitness trade-offs. At the genome level, some codons (nucleotide triplets) allow more efficient translation than their synonymous. Indeed, the genetic encoding of proteins is redundant with multiple codons specifying the same amino acid. The optimization of codon-usage is a mean to reduce the costs associated with protein production. I analysed codon-usage at the genome level in 45 fungal species to reveal that generalist parasites are highly codon optimized. Moreover, I showed that optimized codons are under purifying selection, suggesting that codon optimization is an adaptation to generalist parasitism in fungi.
Download or read book Microbial mediated Induced Systemic Resistance in Plants written by Devendra K. Choudhary and published by Springer. This book was released on 2016-03-22 with total page 233 pages. Available in PDF, EPUB and Kindle. Book excerpt: With a focus on food safety, this book highlights the importance of microbes in sustainable agriculture. Plants, sessile organisms that are considered as primary producers in the ecosystem and communicate with above- and below-ground communities that consist of microbes, insects, and other vertebrate and invertebrate animals, are subjected to various kinds of stress. Broadly speaking, these can be subdivided into abiotic and biotic stresses. Plants have evolved to develop elaborate mechanisms for coping with and adapting to the environmental stresses. Among other stresses, habitat-imposed biotic stress is one serious condition causing major problems for crop productivity. Most plants employ plant-growth-promoting microorganisms (PGPMs) to combat and protect themselves from stresses and also for better growth. PGPMs are bacteria associated with plant roots and they augment plant productivity and immunity. They are also defined as root-colonizing bacteria that have beneficial effects on plant growth and development. Remarkably, PGPMs including mycorrhizae, rhizobia, and rhizobacteria (Acinetobacter, Agrobacterium, Arthrobacter, Azospirillum, Bacillus, Bradyrhizobium, Frankia, Pseudomonas, Rhizobium, Serratia, Thiobacillus) form associations with plant roots and can promote plant growth by increasing plants’ access to soil minerals and protecting them against pathogens. To combat the pathogens causing different diseases and other biotic stresses, PGPMs produce a higher level of resistance in addition to plants’ indigenous immune systems in the form of induced systemic resistance (ISR). The ISR elicited by PGPMs has suppressed plant diseases caused by a range of pathogens in both the greenhouse and field. As such, the role of these microbes can no longer be ignored for sustainable agriculture. Today, PGPMs are also utilized in the form of bio-fertilizers to increase plant productivity. However, the use of PGPMs requires a precise understanding of the interactions between plants and microbes, between microbes and microbiota, and how biotic factors influence these relationships. Consequently, continued research is needed to develop new approaches to boost the efficiency of PGPMs and to understand the ecological, genetic and biochemical relationships in their habitat. The book focuses on recent research concerning interactions between PGPMs and plants under biotic stress. It addresses key concerns such as – 1. The response of benign microbes that benefit plants under biotic stress 2. The physiological changes incurred in plants under harsh conditions 3. The role of microbial determinants in promoting plant growth under biotic stress The book focuses on a range of aspects related to PGPMs such as their mode of action, priming of plant defence and plant growth in disease challenged crops, multifunctional bio-fertilizers, PGPM-mediated disease suppression, and the effect of PGPMs on secondary metabolites etc. The book will be a valuable asset to researchers and professionals working in the area of microbial-mediated support of plants under biotic stress.
Download or read book Plant pathogen Interactions written by Nicholas J. Talbot and published by CRC Press. This book was released on 2004 with total page 272 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plant diseases are destructive and threaten virtually any crop grown on a commercial scale. They are kept in check by plant breeding strategies that have introgressed disease resistance genes into many important crops, and by the deployment of costly control measures, such as antibiotics and fungicides. However, the capacity for the agents of plant disease - viruses, bacteria, fungi, and oomycetes - to adapt to new conditions, overcoming disease resistance and becoming resistant to pesticides, is very great. For these reasons, understanding the biology of plant diseases is essential for the development of durable control strategies. Plant-Pathogen Interactions provides and overview of our current knowledge of plant-pathogen interactions and the establishment of plant disease, drawing together fundamental new information on plant infection mechanisms and host responses. The role of molecular signals, gene regulation, and the physiology of pathogenic organisms are emphasized, but the role of the prevailing environment in the conditioning of disease is also discussed. Emphasizing the broader understanding that has emerged from the use of molecular genetics and genomics, Plant-Pathogen Interactions highlights those interactions that have been most widely studied and those in which genome information has provided a new level of understanding.
Download or read book The Plant Family Fabaceae written by Mirza Hasanuzzaman and published by Springer. This book was released on 2021-07-02 with total page 541 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book comprehensively introduces all aspects of the physiology, stress responses and tolerance to abiotic stresses of the Fabaceae plants. Different plant families have been providing food, fodder, fuel, medicine and other basic needs for the human and animal since the ancient time. Among the plant families Fabaceae have special importance for their agri-horticultural importance and multifarious uses apart from the basic needs. Interest in the response of Fabaceae plants toward abiotic stresses is growing considering the economic importance and the special adaptive mechanisms. Recent advances and developments in molecular and biotechnological tools has contributed to ease and wider this mission. This book provides up-to-date findings that will be of greater use for the students and researchers, particularly Plant Physiologists, Environmental Scientists, Biotechnologists, Botanists, Food Scientists and Agronomists, to get the information on the recent advances on this plant family in regard to physiology and stress tolerance.
Download or read book Disease Resistance in Crop Plants written by Shabir Hussain Wani and published by Springer. This book was released on 2019-07-24 with total page 314 pages. Available in PDF, EPUB and Kindle. Book excerpt: Human population is escalating at an enormous pace and is estimated to reach 9.7 billion by 2050. As a result, there will be an increase in demand for agricultural production by 60–110% between the years 2005 and 2050 at the global level; the number will be even more drastic in the developing world. Pathogens, animals, and weeds are altogether responsible for between 20 to 40 % of global agricultural productivity decrease. As such, managing disease development in plants continues to be a major strategy to ensure adequate food supply for the world. Accordingly, both the public and private sectors are moving to harness the tools and paradigms that promise resistance against pests and diseases. While the next generation of disease resistance research is progressing, maximum disease resistance traits are expected to be polygenic in nature and controlled by selective genes positioned at putative quantitative trait loci (QTLs). It has also been realized that sources of resistance are generally found in wild relatives or cultivars of lesser agronomic significance. However, introgression of disease resistance traits into commercial crop varieties typically involves many generations of backcrossing to transmit a promising genotype. Molecular marker-assisted breeding (MAB) has been found to facilitate the pre-selection of traits even prior to their expression. To date, researchers have utilized disease resistance genes (R-genes) in different crops including cereals, pulses, and oilseeds and other economically important plants, to improve productivity. Interestingly, comparison of different R genes that empower plants to resist an array of pathogens has led to the realization that the proteins encoded by these genes have numerous features in common. The above observation therefore suggests that plants may have co-evolved signal transduction pathways to adopt resistance against a wide range of divergent pathogens. A better understanding of the molecular mechanisms necessary for pathogen identification and a thorough dissection of the cellular responses to biotic stresses will certainly open new vistas for sustainable crop disease management. This book summarizes the recent advances in molecular and genetic techniques that have been successfully applied to impart disease resistance for plants and crops. It integrates the contributions from plant scientists targeting disease resistance mechanisms using molecular, genetic, and genomic approaches. This collection therefore serves as a reference source for scientists, academicians and post graduate students interested in or are actively engaged in dissecting disease resistance in plants using advanced genetic tools.
Download or read book Plant Cell Death Processes written by Larry D. Nooden and published by Elsevier. This book was released on 2003-12-09 with total page 419 pages. Available in PDF, EPUB and Kindle. Book excerpt: Programmed cell death is a common pattern of growth and development in both animals and plants. However, programmed cell death and related processes are not as generally recognized as central to plant growth. This is changing fast and is becoming more of a focus of intensive research. This edited work will bring under one cover recent reviews of programmed cell death, apoptosis and senescence. Summaries of the myriad aspects of cell death in plants Discussion of the broadest implications of these disparite results A unification of fields where there has been no cross talk Enables easy entry into diverse but related lines of research
Download or read book Bacilli and Agrobiotechnology Phytostimulation and Biocontrol written by Md Tofazzal Islam and published by Springer Nature. This book was released on 2020-01-01 with total page 334 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Gram-positive and spore-forming Bacilli are the most dominant group of bacteria that exist in various ecological niches on the earth. They represent one of the most important unmapped pools of biodiversity with immense potential of applications in agriculture, environment, and industry. As these bacteria are highly tolerant to stressful environment and enhance plant tolerance to harsh environment such as salinity, drought, and heavy metal toxicity, plant-associated Bacilli have high potential for promoting sustainable crop production. Many species of Bacilli are being commercially used as phytostimulator and biofertilizer. Some of them are applied as biopesticide for protecting crop plants from phytopathogens and insect pests. The Bacillus-based products are becoming popular in ecologically sound and climate resilient agricultural production system. In fact, Bacillus and allied species based formulations are already dominating the biopesticides market, although, to compete with other formulations and chemical alternatives, the biology of Bacillus had to be understood from perspective of such applications. Our understanding of the biology and molecular-basis of the beneficial effects of plant-associated Bacilli has greatly been progressed in recent years through genomics, metagenomics, post-genomics and metabolomics studies. The volume two of the series Bacilli and Agrobiotechnology comprehensively reviews and updates current knowledge of Bacilli as phytostimulant and biological control of plant pests. Better understanding the biology, ecology and mechanism of action of the beneficial strains of Bacilli will play a role in the development of products to support green biotechnology in agriculture and industries.
Download or read book Bacilli in Agrobiotechnology written by M. Tofazzal Islam and published by Springer Nature. This book was released on 2022-02-10 with total page 614 pages. Available in PDF, EPUB and Kindle. Book excerpt: The third volume of the series ‘Bacilli and Agrobiotechnology’ is comprised of 25 chapters that bring a unique perspective to the readers about Bacillus-mediated biotic and abiotic plant stress tolerance, bioremediation and bioprospecting. These chapters are prepared by the leading scientists of global repute. The negative impacts of agrochemicals such as chemical fertilizers and pesticides on human health and environment are paramount. Bacillus and allied genera of beneficial plant-associated microbes are presenting beacon of hope to the farmers, plant scientists and stewards of environment. Several chapters of this volume focus on the induction of various signaling pathways in plants by Bacillus spp. to alleviate biotic and abiotic stresses impacted by global climate change Agricultural lands contaminated with heavy metals affect the ecological food chain starting from crop cultivation. How the toxic effects of trace metals originating from industrial effluents and agrochemicals can be remediated? This book addresses how to overcome these issues by applying elite strains of Bacillus. Bioprospecting is a systematic and organized search for conversion of bioresources to industrially important products by utilizing microbe-derived metabolites. This volume is enriched by including the bioprospecting aspects mediated by Bacillus spp. with novel insights.
Download or read book Molecular Aspects of Plant Pathogen Interaction written by Archana Singh and published by Springer. This book was released on 2018-02-15 with total page 367 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book offers an integrated overview of plant–pathogen interactions. It discusses all the steps in the pathway, from the microbe–host-cell interface and the plant’s recognition of the microbe to the plant’s defense response and biochemical alterations to achieve tolerance / resistance. It also sheds light on the classes of pathogens (bacteria, fungus and viruses); effector molecules, such as PAMPs; receptor molecules like PRRs and NBS-LRR proteins; signaling components like MAPKs; regulatory molecules, such as phytohormones and miRNA; transcription factors, such as WRKY; defense-related proteins such as PR-proteins; and defensive metabolites like secondary metabolites. In addition, it examines the role of post-genomics, high-throughput technology (transcriptomics and proteomics) in studying pathogen outbreaks causing crop losses in a number of plants. Providing a comprehensive picture of plant-pathogen interaction, the updated information included in this book is valuable for all those involved in crop improvement.
Download or read book Aspergillus and Penicillium in the Post genomic Era written by Ronald P. de Vries and published by Caister Academic Press Limited. This book was released on 2016 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Genome sequencing has affected studies into the biology of all classes of organisms and this is certainly true for filamentous fungi. The level with which biological systems can be studied since the availability of genomes and post-genomic technologies is beyond what most people could have imagined previously. The fungal genera Aspergillus and Penicillium contain some species that are amongst the most widely used industrial microorganisms and others that are serious pathogens of plants, animals and humans. These genera are also at the forefront of fungal genomics with many genome sequences available and a whole genus genome sequencing project in progress for Aspergillus. This book highlights some of the changes in the studies into these fungi, since the availability of genome sequences. The contributions vary from insights in the taxonomy of these genera, use of genomics for forward genetics and genomic adaptations, to specific stories addressing virulence, carbon starvation, sulphur metabolism, feruloyl esterases, secondary metabolism and pH modulation, to the development of novel methodology for use in parallel to genome sequencing. It therefore provides a taste of the current status of research in Penicillium and Aspergillus and a promise of many more things to come. An essential reference for everyone working with Aspergillus and Penicillium and other filamentous fungi and the book is also recommended reading for everyone with an interest in fungal genomics.
Download or read book Biology of the Grapevine written by Michael G. Mullins and published by Cambridge University Press. This book was released on 1992-07-16 with total page 256 pages. Available in PDF, EPUB and Kindle. Book excerpt: Information on the evolution, taxonomy, morphology, anatomy, physiology and genetics of grapevines has been scarce and thinly spread in the literature on horticulture and the plant sciences. This book aims to provide a concise but comprehensive overview of the biology and cultivation of the grapevine, accessible to all concerned with viticulture. After a description of the essential features of viticulture, including a concise history from antiquity to modern times, the taxonomy of the grapevine and the evolutionary processes which gave rise to the diversity within the Vitaceae is considered. Particular attention is paid to the genera Vitis and Muscadinia, which are considered a reserve of genetic variation for the improvement of grapevines. A description of the vegetative and reproductive anatomy of the grapevine precedes a full discussion of the developmental and environmental physiology of these fascinating and economically important plants. The concluding chapter considers the potential for genetic improvement of grapevines and includes coverage of the problems encountered, and the methods and strategies employed in breeding for scions and rootstocks.
Download or read book Probiotics and Plant Health written by Vivek Kumar and published by Springer. This book was released on 2017-06-30 with total page 599 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book primarily focuses on microbial colonization, its role in plant growth and nutrient cycling, mycorrhizae, and providing an overview of phytospheric microorganisms in sustainable crop systems. Despite the advances made in the study of plant-microbe synergism, the relation between microbes and plant health in the context of food security, soil nutrient management, human and plant health is still largely unexplored. Addressing that gap, the book presents reviews and original research articles that highlight the latest discoveries in plant probiotics, their specificity, diversity and function. Additional sections addressing nutrient management, human health, and plant microbiome management to improve plant productivity round out the coverage.
Download or read book Jasmonate Signaling written by Alain Goossens and published by Humana. This book was released on 2016-08-23 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: It is now well established that jasmonates, originally identified as the major component of jasmine scent, play a universal role in the plant kingdom and are involved in the regulation of diverse aspects of plant biology, including growth, development, metabolism, and interaction with the environment. In Jasmonate Signaling: Methods and Protocols, experts in the field aim to unite powerful emerging omics platforms with a number of key reductionist approaches to form a comprehensive collection of tools and protocols. The detailed chapters in this book embrace physiological, environmental, molecular, omics, and bioinformatics approaches that allow dissecting jasmonate actions in the model species Arabidopsis thaliana or in other plants. Written in the highly successful Methods in Molecular Biology series format, chapters feature introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, along with tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Jasmonate Signaling: Methods and Protocols will empower interested researchers to dissect all steps of jasmonate signaling and the processes they modulate.
Download or read book Abiotic Stress Response in Plants written by Arun Shanker and published by BoD – Books on Demand. This book was released on 2011-08-29 with total page 362 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plants, unlike animals, are sessile. This demands that adverse changes in their environment are quickly recognized, distinguished and responded to with suitable reactions. Drought, heat, cold and salinity are among the major abiotic stresses that adversely affect plant growth and productivity. In general, abiotic stress often causes a series of morphological, physiological, biochemical and molecular changes that unfavorably affect plant growth, development and productivity. Drought, salinity, extreme temperatures (cold and heat) and oxidative stress are often interrelated; these conditions singularly or in combination induce cellular damage. To cope with abiotic stresses, of paramount significance is to understand plant responses to abiotic stresses that disturb the homeostatic equilibrium at cellular and molecular level in order to identify a common mechanism for multiple stress tolerance. This multi authored edited compilation attempts to put forth an all-inclusive biochemical and molecular picture in a systems approach wherein mechanism and adaptation aspects of abiotic stress are dealt with. The chief objective of the book hence is to deliver state of the art information for comprehending the effects of abiotic stress in plants at the cellular level.
