Download or read book Dynamic Imaging and Fast Reconstruction Algorithms in Tomography written by and published by . This book was released on 1999 with total page 36 pages. Available in PDF, EPUB and Kindle. Book excerpt: During the period of sponsorship under the JSEP fellowship, the researcher has studied tomographic imaging, the mathematical process that underlies a number of technologies such as Synthetic Aperture Radar, X-ray computer tomography, Magnetic Resonance Imaging, etc. In particular, his research has focused on two key aspects of tomography. The first is the study of tomography in the presence of motion. In this area, he was the first to establish conditions for unique and stable reconstruction in the presence of rigid body motion. The second aspect is that of fast algorithms for tomography. He has developed new advanced algorithms that permit tomographic imaging to be carried out much faster than was previously possible. In the process of studying these two key area, he has developed new and fundamental results in signal processing.
Download or read book Medical Image Reconstruction written by Gengsheng Zeng and published by Springer Science & Business Media. This book was released on 2010-12-28 with total page 204 pages. Available in PDF, EPUB and Kindle. Book excerpt: "Medical Image Reconstruction: A Conceptual Tutorial" introduces the classical and modern image reconstruction technologies, such as two-dimensional (2D) parallel-beam and fan-beam imaging, three-dimensional (3D) parallel ray, parallel plane, and cone-beam imaging. This book presents both analytical and iterative methods of these technologies and their applications in X-ray CT (computed tomography), SPECT (single photon emission computed tomography), PET (positron emission tomography), and MRI (magnetic resonance imaging). Contemporary research results in exact region-of-interest (ROI) reconstruction with truncated projections, Katsevich's cone-beam filtered backprojection algorithm, and reconstruction with highly undersampled data with l0-minimization are also included. This book is written for engineers and researchers in the field of biomedical engineering specializing in medical imaging and image processing with image reconstruction. Gengsheng Lawrence Zeng is an expert in the development of medical image reconstruction algorithms and is a professor at the Department of Radiology, University of Utah, Salt Lake City, Utah, USA.
Download or read book Fundamentals of Computerized Tomography written by Gabor T. Herman and published by Springer Science & Business Media. This book was released on 2009-07-14 with total page 302 pages. Available in PDF, EPUB and Kindle. Book excerpt: This revised and updated second edition – now with two new chapters - is the only book to give a comprehensive overview of computer algorithms for image reconstruction. It covers the fundamentals of computerized tomography, including all the computational and mathematical procedures underlying data collection, image reconstruction and image display. Among the new topics covered are: spiral CT, fully 3D positron emission tomography, the linogram mode of backprojection, and state of the art 3D imaging results. It also includes two new chapters on comparative statistical evaluation of the 2D reconstruction algorithms and alternative approaches to image reconstruction.
Download or read book Residual Correction Algorithms for Statistical Image Reconstruction in Positron Emission Tomography written by Lin Fu and published by . This book was released on 2010 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Positron emission tomography (PET) is a radionuclide imaging modality that plays important roles in visualizing, targeting, and quantifying functional processes in vivo. High-resolution and quantitative PET images are reconstructed by solving large-scale inverse problems with iterative methods that incorporate accurate physics and noise modeling of the imaging process. The computation demands of PET image reconstruction are rapidly increasing as higher-resolution detectors, larger imaging field-of-view, and dynamic or adaptive data acquisition modes are being adopted by modern PET scanners. The trend of the increase in the computation demands is even faster than Moore's law that describes the exponential growth in the number of transistors placed on an integrated circuit. In this project a residual correction mechanism is introduced to PET image reconstruction to create computationally efficient yet accurate tomographic reconstruction algorithms. By using residual correction, reconstruction methods are able to adopt a more simplified physical model for fast computation while retaining the accuracy of the final solution. Residual correction can accelerate existing image reconstruction packages. It allows iterative reconstruction with more accurate physical models which are currently impractical due to the high computation cost. Two illustrative applications of the residual correction approach are provided. One is image reconstruction with an object-dependent Monte Carlo based physics model. The other is image reconstruction using an ultra fast GPU-accelerated simplified geometric model.
Download or read book Three Dimensional Image Reconstruction in Radiology and Nuclear Medicine written by Pierre Grangeat and published by Springer Science & Business Media. This book was released on 2013-03-09 with total page 313 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book contains a selection of communications presented at the Third International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, held 4-6 July 1995 at Domaine d' Aix-Marlioz, Aix-Ies-Bains, France. This nice resort provided an inspiring environment to hold discussions and presentations on new and developing issues. Roentgen discovered X-ray radiation in 1895 and Becquerel found natural radioactivity in 1896 : a hundred years later, this conference was focused on the applications of such radiations to explore the human body. If the physics is now fully understood, 3D imaging techniques based on ionising radiations are still progressing. These techniques include 3D Radiology, 3D X-ray Computed Tomography (3D-CT), Single Photon Emission Computed Tomography (SPECT), Positron Emission Tomography (PET). Radiology is dedicated to morphological imaging, using transmitted radiations from an external X-ray source, and nuclear medicine to functional imaging, using radiations emitted from an internal radioactive tracer. In both cases, new 3D tomographic systems will tend to use 2D detectors in order to improve the radiation detection efficiency. Taking a set of 2D acquisitions around the patient, 3D acquisitions are obtained. Then, fully 3D image reconstruction algorithms are required to recover the 3D image of the body from these projection measurements.
Download or read book Medical Imaging Systems written by Andreas Maier and published by Springer. This book was released on 2018-08-02 with total page 263 pages. Available in PDF, EPUB and Kindle. Book excerpt: This open access book gives a complete and comprehensive introduction to the fields of medical imaging systems, as designed for a broad range of applications. The authors of the book first explain the foundations of system theory and image processing, before highlighting several modalities in a dedicated chapter. The initial focus is on modalities that are closely related to traditional camera systems such as endoscopy and microscopy. This is followed by more complex image formation processes: magnetic resonance imaging, X-ray projection imaging, computed tomography, X-ray phase-contrast imaging, nuclear imaging, ultrasound, and optical coherence tomography.
Download or read book 3D Image Reconstruction for CT and PET written by Daniele Panetta and published by CRC Press. This book was released on 2020-10-11 with total page 97 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is a practical guide to tomographic image reconstruction with projection data, with strong focus on Computed Tomography (CT) and Positron Emission Tomography (PET). Classic methods such as FBP, ART, SIRT, MLEM and OSEM are presented with modern and compact notation, with the main goal of guiding the reader from the comprehension of the mathematical background through a fast-route to real practice and computer implementation of the algorithms. Accompanied by example data sets, real ready-to-run Python toolsets and scripts and an overview the latest research in the field, this guide will be invaluable for graduate students and early-career researchers and scientists in medical physics and biomedical engineering who are beginners in the field of image reconstruction. A top-down guide from theory to practical implementation of PET and CT reconstruction methods, without sacrificing the rigor of mathematical background Accompanied by Python source code snippets, suggested exercises, and supplementary ready-to-run examples for readers to download from the CRC Press website Ideal for those willing to move their first steps on the real practice of image reconstruction, with modern scientific programming language and toolsets Daniele Panetta is a researcher at the Institute of Clinical Physiology of the Italian National Research Council (CNR-IFC) in Pisa. He earned his MSc degree in Physics in 2004 and specialisation diploma in Health Physics in 2008, both at the University of Pisa. From 2005 to 2007, he worked at the Department of Physics "E. Fermi" of the University of Pisa in the field of tomographic image reconstruction for small animal imaging micro-CT instrumentation. His current research at CNR-IFC has as its goal the identification of novel PET/CT imaging biomarkers for cardiovascular and metabolic diseases. In the field micro-CT imaging, his interests cover applications of three-dimensional morphometry of biosamples and scaffolds for regenerative medicine. He acts as reviewer for scientific journals in the field of Medical Imaging: Physics in Medicine and Biology, Medical Physics, Physica Medica, and others. Since 2012, he is adjunct professor in Medical Physics at the University of Pisa. Niccolò Camarlinghi is a researcher at the University of Pisa. He obtained his MSc in Physics in 2007 and his PhD in Applied Physics in 2012. He has been working in the field of Medical Physics since 2008 and his main research fields are medical image analysis and image reconstruction. He is involved in the development of clinical, pre-clinical PET and hadron therapy monitoring scanners. At the time of writing this book he was a lecturer at University of Pisa, teaching courses of life-sciences and medical physics laboratory. He regularly acts as a referee for the following journals: Medical Physics, Physics in Medicine and Biology, Transactions on Medical Imaging, Computers in Biology and Medicine, Physica Medica, EURASIP Journal on Image and Video Processing, Journal of Biomedical and Health Informatics.
Download or read book Medical Image Reconstruction written by Gengsheng Lawrence Zeng and published by Walter de Gruyter GmbH & Co KG. This book was released on 2023-07-04 with total page 392 pages. Available in PDF, EPUB and Kindle. Book excerpt: This textbook introduces the essential concepts of tomography in the field of medical imaging. The medical imaging modalities include x-ray CT (computed tomography), PET (positron emission tomography), SPECT (single photon emission tomography) and MRI. In these modalities, the measurements are not in the image domain and the conversion from the measurements to the images is referred to as the image reconstruction. The work covers various image reconstruction methods, ranging from the classic analytical inversion methods to the optimization-based iterative image reconstruction methods. As machine learning methods have lately exhibited astonishing potentials in various areas including medical imaging the author devotes one chapter to applications of machine learning in image reconstruction. Based on college level in mathematics, physics, and engineering the textbook supports students in understanding the concepts. It is an essential reference for graduate students and engineers with electrical engineering and biomedical background due to its didactical structure and the balanced combination of methodologies and applications,
Download or read book Mathematics and Physics of Emerging Biomedical Imaging written by Committee on the Mathematics and Physics of Emerging Dynamic Biomedical Imaging and published by National Academies Press. This book was released on 1996-03-13 with total page 261 pages. Available in PDF, EPUB and Kindle. Book excerpt: This cross-disciplinary book documents the key research challenges in the mathematical sciences and physics that could enable the economical development of novel biomedical imaging devices. It is hoped that the infusion of new insights from mathematical scientists and physicists will accelerate progress in imaging. Incorporating input from dozens of biomedical researchers who described what they perceived as key open problems of imaging that are amenable to attack by mathematical scientists and physicists, this book introduces the frontiers of biomedical imaging, especially the imaging of dynamic physiological functions, to the educated nonspecialist. Ten imaging modalities are covered, from the well-established (e.g., CAT scanning, MRI) to the more speculative (e.g., electrical and magnetic source imaging). For each modality, mathematics and physics research challenges are identified and a short list of suggested reading offered. Two additional chapters offer visions of the next generation of surgical and interventional techniques and of image processing. A final chapter provides an overview of mathematical issues that cut across the various modalities.
Download or read book Principles of Computerized Tomographic Imaging written by Avinash C. Kak and published by SIAM. This book was released on 2001-01-01 with total page 335 pages. Available in PDF, EPUB and Kindle. Book excerpt: A comprehensive, tutorial-style introduction to the algorithms necessary for tomographic imaging.
Download or read book Emission Tomography written by Miles N. Wernick and published by Elsevier. This book was released on 2004-12-07 with total page 597 pages. Available in PDF, EPUB and Kindle. Book excerpt: PET and SPECT are two of today’s most important medical-imaging methods, providing images that reveal subtle information about physiological processes in humans and animals. Emission Tomography: The Fundamentals of PET and SPECT explains the physics and engineering principles of these important functional-imaging methods. The technology of emission tomography is covered in detail, including historical origins, scientific and mathematical foundations, imaging systems and their components, image reconstruction and analysis, simulation techniques, and clinical and laboratory applications. The book describes the state of the art of emission tomography, including all facets of conventional SPECT and PET, as well as contemporary topics such as iterative image reconstruction, small-animal imaging, and PET/CT systems. This book is intended as a textbook and reference resource for graduate students, researchers, medical physicists, biomedical engineers, and professional engineers and physicists in the medical-imaging industry. Thorough tutorials of fundamental and advanced topics are presented by dozens of the leading researchers in PET and SPECT. SPECT has long been a mainstay of clinical imaging, and PET is now one of the world’s fastest growing medical imaging techniques, owing to its dramatic contributions to cancer imaging and other applications. Emission Tomography: The Fundamentals of PET and SPECT is an essential resource for understanding the technology of SPECT and PET, the most widely used forms of molecular imaging. *Contains thorough tutorial treatments, coupled with coverage of advanced topics *Three of the four holders of the prestigious Institute of Electrical and Electronics Engineers Medical Imaging Scientist Award are chapter contributors *Include color artwork
Download or read book Novel Compressed Sensing Algorithms with Applications to Magnetic Resonance Imaging written by Yue Hu and published by . This book was released on 2014 with total page 129 pages. Available in PDF, EPUB and Kindle. Book excerpt: "Magnetic Resonance Imaging (MRI) is a widely used non-invasive clinical imaging modality. Unlike other medical imaging tools, such as X-rays or computed tomography (CT), the advantage of MRI is that it uses non-ionizing radiation. In addition, MRI can provide images with multiple contrast by using different pulse sequences and protocols. However, acquisition speed, which remains the main challenge for MRI, limits its clinical application. Clinicians have to compromise between spatial resolution, SNR, and scan time, which leads to sub-optimal performance. The acquisition speed of MRI can be improved by collecting fewer data samples. However, according to the Nyquist sampling theory, undersampling in k-space will lead to aliasing artifacts in the recovered image. The recent mathematical theory of compressed sensing has been developed to exploit the property of sparsity for signals/images. It states that if an image is sparse, it can be accurately reconstructed using a subset of the k-space data under certain conditions. Generally, the reconstruction is formulated as an optimization problem. The sparsity of the image is enforced by using a sparsifying transform. Total variation (TV) is one of the commonly used methods, which enforces the sparsity of the image gradients and provides good image quality. However, TV introduces patchy or painting-like artifacts in the reconstructed images. We introduce novel regularization penalties involving higher degree image derivatives to overcome the practical problems associated with the classical TV scheme. Motivated by novel reinterpretations of the classical TV regularizer, we derive two families of functionals, which we term as isotropic and anisotropic higher degree total variation (HDTV) penalties, respectively. The numerical comparisons of the proposed scheme with classical TV penalty, current second order methods, and wavelet algorithms demonstrate the performance improvement. Specifically, the proposed algorithms minimize the staircase and ringing artifacts that are common with TV schemes and wavelet algorithms, while better preserving the singularities. Higher dimensional MRI is also challenging due to the above mentioned trade-offs. We propose a three-dimensional (3D) version of HDTV (3D-HDTV) to recover 3D datasets. One of the challenges associated with the HDTV framework is the high computational complexity of the algorithm. We introduce a novel computationally efficient algorithm for HDTV regularized image recovery problems. We find that this new algorithm improves the convergence rate by a factor of ten compared to the previously used method. We demonstrate the utility of 3D-HDTV regularization in the context of compressed sensing, denoising, and deblurring of 3D MR dataset and fluorescence microscope images. We show that 3D-HDTV outperforms 3D-TV schemes in terms of the signal to noise ratio (SNR) of the reconstructed images and its ability to preserve ridge-like details in the 3D datasets. To address speed limitations in dynamic MR imaging, which is an important scheme in multi-dimensional MRI, we combine the properties of low rank and sparsity of the dataset to introduce a novel algorithm to recover dynamic MR datasets from undersampled k-t space data. We pose the reconstruction as an optimization problem, where we minimize a linear combination of data consistency error, non-convex spectral penalty, and non-convex sparsity penalty. The problem is solved using an iterative, three step, alternating minimization scheme. Our results on brain perfusion data show a signicant improvement in SNR and image quality compared to classical dynamic imaging algorithms"--Page vii-ix.
Download or read book Image Reconstruction written by Gengsheng Lawrence Zeng and published by Walter de Gruyter GmbH & Co KG. This book was released on 2017-03-20 with total page 240 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book introduces the classical and modern image reconstruction technologies. It covers topics in two-dimensional (2D) parallel-beam and fan-beam imaging, three-dimensional (3D) parallel ray, parallel plane, and cone-beam imaging. Both analytical and iterative methods are presented. The applications in X-ray CT, SPECT (single photon emission computed tomography), PET (positron emission tomography), and MRI (magnetic resonance imaging) are discussed. Contemporary research results in exact region-of-interest (ROI) reconstruction with truncated projections, Katsevich’s cone-beam filtered backprojection algorithm, and reconstruction with highly under-sampled data are included. The last chapter of the book is devoted to the techniques of using a fast analytical algorithm to reconstruct an image that is equivalent to an iterative reconstruction. These techniques are the author’s most recent research results. This book is intended for students, engineers, and researchers who are interested in medical image reconstruction. Written in a non-mathematical way, this book provides an easy access to modern mathematical methods in medical imaging. Table of Content: Chapter 1 Basic Principles of Tomography 1.1 Tomography 1.2 Projection 1.3 Image Reconstruction 1.4 Backprojection 1.5 Mathematical Expressions Problems References Chapter 2 Parallel-Beam Image Reconstruction 2.1 Fourier Transform 2.2 Central Slice Theorem 2.3 Reconstruction Algorithms 2.4 A Computer Simulation 2.5 ROI Reconstruction with Truncated Projections 2.6 Mathematical Expressions (The Fourier Transform and Convolution , The Hilbert Transform and the Finite Hilbert Transform , Proof of the Central Slice Theorem, Derivation of the Filtered Backprojection Algorithm , Expression of the Convolution Backprojection Algorithm, Expression of the Radon Inversion Formula ,Derivation of the Backprojection-then-Filtering Algorithm Problems References Chapter 3 Fan-Beam Image Reconstruction 3.1 Fan-Beam Geometry and Point Spread Function 3.2 Parallel-Beam to Fan-Beam Algorithm Conversion 3.3 Short Scan 3.4 Mathematical Expressions (Derivation of a Filtered Backprojection Fan-Beam Algorithm, A Fan-Beam Algorithm Using the Derivative and the Hilbert Transform) Problems References Chapter 4 Transmission and Emission Tomography 4.1 X-Ray Computed Tomography 4.2 Positron Emission Tomography and Single Photon Emission Computed Tomography 4.3 Attenuation Correction for Emission Tomography 4.4 Mathematical Expressions Problems References Chapter 5 3D Image Reconstruction 5.1 Parallel Line-Integral Data 5.2 Parallel Plane-Integral Data 5.3 Cone-Beam Data (Feldkamp's Algorithm, Grangeat's Algorithm, Katsevich's Algorithm) 5.4 Mathematical Expressions (Backprojection-then-Filtering for Parallel Line-Integral Data, Filtered Backprojection Algorithm for Parallel Line-Integral Data, 3D Radon Inversion Formula, 3D Backprojection-then-Filtering Algorithm for Radon Data, Feldkamp's Algorithm, Tuy's Relationship, Grangeat's Relationship, Katsevich’s Algorithm) Problems References Chapter 6 Iterative Reconstruction 6.1 Solving a System of Linear Equations 6.2 Algebraic Reconstruction Technique 6.3 Gradient Descent Algorithms 6.4 Maximum-Likelihood Expectation-Maximization Algorithms 6.5 Ordered-Subset Expectation-Maximization Algorithm 6.6 Noise Handling (Analytical Methods, Iterative Methods, Iterative Methods) 6.7 Noise Modeling as a Likelihood Function 6.8 Including Prior Knowledge 6.9 Mathematical Expressions (ART, Conjugate Gradient Algorithm, ML-EM, OS-EM, Green’s One-Step Late Algorithm, Matched and Unmatched Projector/Backprojector Pairs ) 6.10 Reconstruction Using Highly Undersampled Data with l0 Minimization Problems References Chapter 7 MRI Reconstruction 7.1 The 'M' 7.2 The 'R' 7.3 The 'I'; (To Obtain z-Information, x-Information, y-Information) 7.4 Mathematical Expressions Problems References Indexing
Download or read book Sequential and Parallel Approaches to Fast Image Reconstruction in 3 D Computerized Tomography written by Chung-Ming Chen and published by . This book was released on 1989 with total page 260 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Accelerated Tomographic Image Reconstruction of SPECT CT Using GPU Parallelization written by Hui Pan and published by . This book was released on 2015 with total page 232 pages. Available in PDF, EPUB and Kindle. Book excerpt: A graphics processing unit (GPU), also occasionally called a visual processing unit (VPU), is a specialized electronic circuit designed to rapidly manipulate and alter memory to accelerate the creation of images in a frame buffer intended for output to a display. With the increasing needs of the very active computer graphics development community, the GPU has become an integral part of today's mainstream computing systems. Especially over the past six years, GPUs have been evolving at a rapid rate. Due to the massively parallel architecture and relatively low cost, GPUs have become powerful platforms for scientific computation. For tomography, iterative reconstruction algorithms pose tremendous computational challenges due to the massive computation requirements. GPUs provide an affordable platform to these requirements. In this work, we developed some GPU enabled algorithms to make use of acceleration techniques to speed up the reconstruction processing. Single Photon Emission Computed Tomography (SPECT) can require two types of images: static and dynamic. In the static case, we parallelized the Maximum likelihood Expectation Maximization Algorithm (MLEM), Ordered-Subsets Expectation Maximization (OSEM), Computed Tomography (CT), and the Point Spread Function algorithm (PSF). In the dynamic case, we parallelized the dynamic MLEM. All the algorithms performances are validated by the same algorithms but in the CPU version. For each algorithm, as the precondition for the same reconstructed results, we compared the experiment evaluation of scalability between the CPU and GPU versions. Moreover, we reorganized the GPU thread balancing to improve the GPU algorithm performance. In addition, we developed a data organization system, which is called ReMI, to prevent data loss or corruption. Our all experiments dataset were downloaded from this system.
Download or read book Computed Tomography written by Per Christian Hansen and published by SIAM. This book was released on 2021-09-25 with total page 355 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes fundamental computational methods for image reconstruction in computed tomography (CT) with a focus on a pedagogical presentation of these methods and their underlying concepts. Insights into the advantages, limitations, and theoretical and computational aspects of the methods are included, giving a balanced presentation that allows readers to understand and implement CT reconstruction algorithms. Unique in its emphasis on the interplay between modeling, computing, and algorithm development, Computed Tomography: Algorithms, Insight, and Just Enough Theory develops the mathematical and computational aspects of three main classes of reconstruction methods: classical filtered back-projection, algebraic iterative methods, and variational methods based on nonlinear numerical optimization algorithms. It spotlights the link between CT and numerical methods, which is rarely discussed in current literature, and describes the effects of incomplete data using both microlocal analysis and singular value decomposition (SVD). This book sets the stage for further exploration of CT algorithms. Readers will be able to grasp the underlying mathematical models to motivate and derive the basic principles of CT reconstruction and will gain basic understanding of fundamental computational challenges of CT, such as the influence of noisy and incomplete data, as well as the reconstruction capabilities and the convergence of the iterative algorithms. Exercises using MATLAB are included, allowing readers to experiment with the algorithms and making the book suitable for teaching and self-study. Computed Tomography: Algorithms, Insight, and Just Enough Theory is primarily aimed at students, researchers, and practitioners interested in the computational aspects of X-ray CT and is also relevant for anyone working with other forms of tomography, such as neutron and electron tomography, that share the same mathematical formulation. With its basis in lecture notes developed for a PhD course, it is appropriate as a textbook for courses on computational methods for X-ray CT and computational methods for inverse problems.
Download or read book Fast Radiative Transfer Equation Based Image Reconstruction Algorithms for Non Contact Diffuse Optical Tomography Systems written by and published by . This book was released on 2015 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: According to these studies, the novel reconstruction algorithm is up to 30 times faster than traditional reconstruction techniques, while achieving comparable reconstruction accuracy.
