Download or read book Computational Ecology Artificial Neural Networks And Their Applications written by Wenjun Zhang and published by World Scientific. This book was released on 2010-06-25 with total page 310 pages. Available in PDF, EPUB and Kindle. Book excerpt: Due to the complexity and non-linearity of most ecological problems, artificial neural networks (ANNs) have attracted attention from ecologists and environmental scientists in recent years. As these networks are increasingly being used in ecology for modeling, simulation, function approximation, prediction, classification and data mining, this unique and self-contained book will be the first comprehensive treatment of this subject, by providing readers with overall and in-depth knowledge on algorithms, programs, and applications of ANNs in ecology. Moreover, a new area of ecology, i.e., computational ecology, is proposed and its scopes and objectives are defined and discussed.Computational Ecology consists of two parts: the first describes the methods and algorithms of ANNs, interpretability and mathematical generalization of neural networks, Matlab neural network toolkit, etc., while the second provides case studies of applications of ANNs in ecology, Matlab codes, and comparisons of ANNs with conventional methods. This publication will be a valuable reference for research scientists, university teachers, graduate students and high-level undergraduates in the areas of ecology, environmental sciences, and computational science.

Download or read book Computational Ecology written by Wenjun Zhang and published by World Scientific. This book was released on 2010 with total page 310 pages. Available in PDF, EPUB and Kindle. Book excerpt: Ch. 1. Introduction. 1. Computational ecology. 2. Artificial neural networks and ecological applications -- pt. I. Artificial neural networks : principles, theories and algorithms. ch. 2. Feedforward neural networks. 1. Linear separability and perceptron. 2. Some analogies of multilayer feedforward networks. 3. Functionability of multilayer feedforward networks. ch. 3. Linear neural networks. 1. Linear neural networks. 2. LMS rule. ch. 4. Radial basis function neural networks. 1. Theory of RBF neural network. 2. Regularized RBF neural network. 3. RBF neural network learning. 4. Probabilistic neural network. 5. Generalized regression neural network. 6. Functional link neural network. 7. Wavelet neural network. ch. 5. BP neural network. 1. BP algorithm. 2. BP theorem. 3. BP training. 4. Limitations and improvements of BP algorithm. ch. 6. Self-organizing neural networks. 1. Self-organizing feature map neural network. 2. Self-organizing competitive learning neural network. 3. Hamming neural network. 4. WTA neural network. 5. LVQ neural network. 6. Adaptive resonance theory. ch. 7. Feedback neural networks. 1. Elman neural network. 2. Hopfield neural networks. 3. Simulated annealing. 4. Boltzmann machine. ch. 8. Design and customization of artificial neural networks. 1. Mixture of experts. 2. Hierarchical mixture of experts. 3. Neural network controller. 4. Customization of neural networks. ch. 9. Learning theory, architecture choice and interpretability of neural networks. 1. Learning theory. 2. Architecture choice. 3. Interpretability of neural networks. ch. 10. Mathematical foundations of artificial neural networks. 1. Bayesian methods. 2. Randomization, bootstrap and Monte Carlo techniques. 3. Stochastic process and stochastic differential equation. 4. Interpolation. 5. Function approximation. 6. Optimization methods. 7. Manifold and differential geometry. 8. Functional analysis. 9. Algebraic topology. 10. Motion stability. 11. Entropy of a system. 12. Distance or similarity measures. ch. 11. Matlab neural network toolkit. 1. Functions of perceptron. 2. Functions of linear neural networks. 3. Functions of BP neural network. 4. Functions of self-organizing neural networks. 5. Functions of radial basis neural networks. 6. Functions of probabilistic neural network. 7. Function of generalized regression neural network. 8. Functions of Hopfield neural network. 9. Function of Elman neural network -- pt. II. Applications of artificial neural networks in ecology. ch. 12. Dynamic modeling of survival process. 1. Model description. 2. Data description. 3. Results. 4. Discussion. ch. 13. Simulation of plant growth process. 1. Model description. 2. Data source. 3. Results. 4. Discussion. ch. 14. Simulation of food intake dynamics. 1. Model description. 2. Data description. 3. Results. 4. Discussion. ch. 15. Species richness estimation and sampling data documentation. 1. Estimation of plant species richness on grassland. 2. Documentation of sampling data of invertebrates. ch. 16. Modeling arthropod abundance from plant composition of grassland community. 1. Model description. 2. Data description. 3. Results. 4. Discussion. ch. 17. Pattern recognition and classification of ecosystems and functional groups. 1. Model description. 2. Data source. 3. Results. 4. Discussion. ch. 18. Modeling spatial distribution of arthropods. 1. Model description. 2. Data description. 3. Results. 4. Discussion. ch. 19. Risk assessment of species invasion and establishment. 1. Invasion risk assessment based on species assemblages. 2. Determination of abiotic factors influencing species invasion. ch. 20. Prediction of surface ozone. 1. BP prediction of daily total ozone. 2. MLP Prediction of hourly ozone levels. ch. 21. Modeling dispersion and distribution of oxide and nitrate pollutants. 1. Modeling nitrogen dioxide dispersion. 2. Simulation of nitrate distribution in ground water. ch. 22. Modeling terrestrial biomass. 1. Estimation of aboveground grassland biomass. 2. Estimation of trout biomass

Download or read book Computational Ecology Graphs Networks And Agent based Modeling written by Wenjun Zhang and published by World Scientific. This book was released on 2012-05-04 with total page 382 pages. Available in PDF, EPUB and Kindle. Book excerpt: Graphs, networks and agent-based modeling are the most thriving and attracting sciences used in ecology and environmental sciences. As such, this book is the first comprehensive treatment of the subject in the areas of ecology and environmental sciences.From this integrated and self-contained book, researchers, university teachers and students will be provided with an in-depth and complete insight on knowledge, methodology and recent advances of graphs, networks and agent-based-modeling in ecology and environmental sciences.Java codes and a standalone software package will be presented in the book for easy use for those not familiar with mathematical details.

Download or read book Computational Molecular Evolution written by Ziheng Yang and published by Oxford University Press, USA. This book was released on 2006-10-05 with total page 374 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes the models, methods and algorithms that are most useful for analysing the ever-increasing supply of molecular sequence data, with a view to furthering our understanding of the evolution of genes and genomes.

Download or read book Computational Ecology written by Wenjun Zhang and published by World Scientific. This book was released on 2012 with total page 382 pages. Available in PDF, EPUB and Kindle. Book excerpt: Graphs, networks and agent-based modeling are the most thriving and attracting sciences used in ecology and environmental sciences. As such, this book is the first comprehensive treatment of the subject in the areas of ecology and environmental sciences. From this integrated and self-contained book, researchers, university teachers and students will be provided with an in-depth and complete insight on knowledge, methodology and recent advances of graphs, networks and agent-based-modeling in ecology and environmental sciences. Java codes and a standalone software package will be presented in the book for easy use for those not familiar with mathematical details.

Download or read book Encyclopedia of Theoretical Ecology written by Alan Hastings and published by Univ of California Press. This book was released on 2012-05-31 with total page 848 pages. Available in PDF, EPUB and Kindle. Book excerpt: "A bold and successful attempt to illustrate the theoretical foundations of all of the subdisciplines of ecology, including basic and applied, and extending through biophysical, population, community, and ecosystem ecology. Encyclopedia of Theoretical Ecology is a compendium of clear and concise essays by the intellectual leaders across this vast breadth of knowledge."--Harold Mooney, Stanford University "A remarkable and indispensable reference work that also is flexible enough to provide essential readings for a wide variety of courses. A masterful collection of authoritative papers that convey the rich and fundamental nature of modern theoretical ecology."--Simon A. Levin, Princeton University "Theoretical ecologists exercise their imaginations to make sense of the astounding complexity of both real and possible ecosystems. Imagining a real or possible topic left out of the Encyclopedia of Theoretical Ecology has proven just as challenging. This comprehensive compendium demonstrates that theoretical ecology has become a mature science, and the volume will serve as the foundation for future creativity in this area."--Fred Adler, University of Utah "The editors have assembled an outstanding group of contributors who are a great match for their topics. Sometimes the author is a key, authoritative figure in a field; and at other times, the author has enough distance to convey all sides of a subject. The next time you need to introduce ecology students to a theoretical topic, you'll be glad to have this encyclopedia on your bookshelf."--Stephen Ellner, Cornell University “Everything you wanted to know about theoretical ecology, and much that you didn’t know you needed to know but will now! Alan Hastings and Louis Gross have done us a great service by bringing together in very accessible form a huge amount of information about a broad, complicated, and expanding field.”--Daniel Simberloff, University of Tennessee, Knoxville

Download or read book A Computational Approach to Statistical Arguments in Ecology and Evolution written by George F. Estabrook and published by Cambridge University Press. This book was released on 2011-09-29 with total page 267 pages. Available in PDF, EPUB and Kindle. Book excerpt: Scientists need statistics. Increasingly this is accomplished using computational approaches. Freeing readers from the constraints, mysterious formulas and sophisticated mathematics of classical statistics, this book is ideal for researchers who want to take control of their own statistical arguments. It demonstrates how to use spreadsheet macros to calculate the probability distribution predicted for any statistic by any hypothesis. This enables readers to use anything that can be calculated (or observed) from their data as a test statistic and hypothesize any probabilistic mechanism that can generate data sets similar in structure to the one observed. A wide range of natural examples drawn from ecology, evolution, anthropology, palaeontology and related fields give valuable insights into the application of the described techniques, while complete example macros and useful procedures demonstrate the methods in action and provide starting points for readers to use or modify in their own research.

Download or read book Ecological Informatics written by Friedrich Recknagel and published by Springer Science & Business Media. This book was released on 2006-05-21 with total page 509 pages. Available in PDF, EPUB and Kindle. Book excerpt: Ecological Informatics promotes interdisciplinary research between ecology and computer science on elucidation of principles of information processing in ecosystems, ecological sustainability by informed decision making, and bio-inspired computation. The 2nd edition of the book consolidates the scope, concepts, and techniques of this newly emerging discipline by a new preface and additional chapters on cellular automata, qualitative reasoning, hybrid evolutionary algorithms and artificial neural networks. It illustrates numerous applications of Ecological Informatics for aquatic and terrestrial ecosystems, image recognition at micro- and macro-scale as well as computer hardware design. Case studies focus on applications of artificial neural networks, evolutionary computation, cellular automata, adaptive agents, fuzzy logic as well as qualitative reasoning. The 2nd edition of the book includes an index with novel evolutionary algorithms for the discovery of multiple nonlinear functions and rule sets as well as parameter optimisation in complex ecological data.

Download or read book Individual based Modeling and Ecology written by Volker Grimm and published by Princeton University Press. This book was released on 2013-11-28 with total page 445 pages. Available in PDF, EPUB and Kindle. Book excerpt: Individual-based models are an exciting and widely used new tool for ecology. These computational models allow scientists to explore the mechanisms through which population and ecosystem ecology arises from how individuals interact with each other and their environment. This book provides the first in-depth treatment of individual-based modeling and its use to develop theoretical understanding of how ecological systems work, an approach the authors call "individual-based ecology.? Grimm and Railsback start with a general primer on modeling: how to design models that are as simple as possible while still allowing specific problems to be solved, and how to move efficiently through a cycle of pattern-oriented model design, implementation, and analysis. Next, they address the problems of theory and conceptual framework for individual-based ecology: What is "theory"? That is, how do we develop reusable models of how system dynamics arise from characteristics of individuals? What conceptual framework do we use when the classical differential equation framework no longer applies? An extensive review illustrates the ecological problems that have been addressed with individual-based models. The authors then identify how the mechanics of building and using individual-based models differ from those of traditional science, and provide guidance on formulating, programming, and analyzing models. This book will be helpful to ecologists interested in modeling, and to other scientists interested in agent-based modeling.

Download or read book Complexity in Chemistry Biology and Ecology written by Danail D. Bonchev and published by Springer Science & Business Media. This book was released on 2007-05-03 with total page 359 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book offers new concepts and ideas that broaden reader’s perception of modern science. Internationally established experts present the inspiring new science of complexity, which discovers new general laws covering wide range of science areas. The book offers a broader view on complexity based on the expertise of the related areas of chemistry, biochemistry, biology, ecology, and physics. Contains methodologies for assessing the complexity of systems that can be directly applied to proteomics and genomics, and network analysis in biology, medicine, and ecology.

Download or read book The Theory of Ecology written by Samuel M. Scheiner and published by University of Chicago Press. This book was released on 2011-07-15 with total page 416 pages. Available in PDF, EPUB and Kindle. Book excerpt: Despite claims to the contrary, the science of ecology has a long history of building theories. Many ecological theories are mathematical, computational, or statistical, though, and rarely have attempts been made to organize or extrapolate these models into broader theories. The Theory of Ecology brings together some of the most respected and creative theoretical ecologists of this era to advance a comprehensive, conceptual articulation of ecological theories. The contributors cover a wide range of topics, from ecological niche theory to population dynamic theory to island biogeography theory. Collectively, the chapters ably demonstrate how theory in ecology accounts for observations about the natural world and how models provide predictive understandings. It organizes these models into constitutive domains that highlight the strengths and weaknesses of ecological understanding. This book is a milestone in ecological theory and is certain to motivate future empirical and theoretical work in one of the most exciting and active domains of the life sciences.

Download or read book The Ecology of Computation written by Bernardo A. Huberman and published by . This book was released on 1988 with total page 358 pages. Available in PDF, EPUB and Kindle. Book excerpt: Propelled by advances in software design and increasing connectivity, distributed computational systems are acquiring characteristics reminiscent of social and biological organizations. This volume is a collection of articles dealing with the nature, design and implementation of these open computational systems. Although varied in their approach and methodology, the articles are related by the goal of understanding and building computational ecologies. They are grouped in three major sections. The first deals with general issues underlying open systems, studies of computational ecologies, and their similarities with social organizations. The second part deals with actual implementations of distributed computation, and the third discusses the overriding problem of designing suitable languages for open systems. All the articles are highly interdisciplinary, emphasizing the application of ecological ideas, game theory, market mechanisms, and evolutionary biology in the study of open systems.

Download or read book General Ecology written by Erich Hörl and published by Bloomsbury Publishing. This book was released on 2017-05-04 with total page 400 pages. Available in PDF, EPUB and Kindle. Book excerpt: Ecology has become one of the most urgent and lively fields in both the humanities and sciences. In a dramatic widening of scope beyond its original concern with the coexistence of living organisms within a natural environment, it is now recognized that there are ecologies of mind, information, sensation, perception, power, participation, media, behavior, belonging, values, the social, the political... a thousand ecologies. This proliferation is not simply a metaphorical extension of the figurative potential of natural ecology: rather, it reflects the thoroughgoing imbrication of natural and technological elements in the constitution of the contemporary environments we inhabit, the rise of a cybernetic natural state, with its corresponding mode of power. Hence this ecology of ecologies initiates and demands that we go beyond the specificity of any particular ecology: a general thinking of ecology which may also constitute an ecological transformation of thought itself is required. In this ambitious and radical new volume of writings, some of the most exciting contemporary thinkers in the field take on the task of revealing and theorizing the extent of the ecologization of existence as the effect of our contemporary sociotechnological condition: together, they bring out the complexity and urgency of the challenge of ecological thought-one we cannot avoid if we want to ask and indeed have a chance of affecting what forms of life, agency, modes of existence, human or otherwise, will participate-and how-in this planet's future.

Download or read book A Biologist s Guide to Mathematical Modeling in Ecology and Evolution written by Sarah P. Otto and published by Princeton University Press. This book was released on 2011-09-19 with total page 745 pages. Available in PDF, EPUB and Kindle. Book excerpt: Thirty years ago, biologists could get by with a rudimentary grasp of mathematics and modeling. Not so today. In seeking to answer fundamental questions about how biological systems function and change over time, the modern biologist is as likely to rely on sophisticated mathematical and computer-based models as traditional fieldwork. In this book, Sarah Otto and Troy Day provide biology students with the tools necessary to both interpret models and to build their own. The book starts at an elementary level of mathematical modeling, assuming that the reader has had high school mathematics and first-year calculus. Otto and Day then gradually build in depth and complexity, from classic models in ecology and evolution to more intricate class-structured and probabilistic models. The authors provide primers with instructive exercises to introduce readers to the more advanced subjects of linear algebra and probability theory. Through examples, they describe how models have been used to understand such topics as the spread of HIV, chaos, the age structure of a country, speciation, and extinction. Ecologists and evolutionary biologists today need enough mathematical training to be able to assess the power and limits of biological models and to develop theories and models themselves. This innovative book will be an indispensable guide to the world of mathematical models for the next generation of biologists. A how-to guide for developing new mathematical models in biology Provides step-by-step recipes for constructing and analyzing models Interesting biological applications Explores classical models in ecology and evolution Questions at the end of every chapter Primers cover important mathematical topics Exercises with answers Appendixes summarize useful rules Labs and advanced material available

Download or read book Encyclopedia of Ecology written by Brian D. Fath and published by Newnes. This book was released on 2014-11-03 with total page 4292 pages. Available in PDF, EPUB and Kindle. Book excerpt: The groundbreaking Encyclopedia of Ecology provides an authoritative and comprehensive coverage of the complete field of ecology, from general to applied. It includes over 500 detailed entries, structured to provide the user with complete coverage of the core knowledge, accessed as intuitively as possible, and heavily cross-referenced. Written by an international team of leading experts, this revolutionary encyclopedia will serve as a one-stop-shop to concise, stand-alone articles to be used as a point of entry for undergraduate students, or as a tool for active researchers looking for the latest information in the field. Entries cover a range of topics, including: Behavioral Ecology Ecological Processes Ecological Modeling Ecological Engineering Ecological Indicators Ecological Informatics Ecosystems Ecotoxicology Evolutionary Ecology General Ecology Global Ecology Human Ecology System Ecology The first reference work to cover all aspects of ecology, from basic to applied Over 500 concise, stand-alone articles are written by prominent leaders in the field Article text is supported by full-color photos, drawings, tables, and other visual material Fully indexed and cross referenced with detailed references for further study Writing level is suited to both the expert and non-expert Available electronically on ScienceDirect shortly upon publication

Download or read book Computational Ecologies Social Dilemmas and the Study of Speculative Dynamics in the Double Auction Market Institution written by Vijay Rajan and published by . This book was released on 1996 with total page 236 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book California Grasslands written by Mark R. Stromberg and published by Univ of California Press. This book was released on 2007-12-03 with total page 416 pages. Available in PDF, EPUB and Kindle. Book excerpt: "This highly synthetic and scholarly work brings together new and important scientific contributions by leading experts on a rich diversity of topics concerning the history, ecology, and conservation of California's endangered grasslands. The editors and authors have succeeded admirably in drawing from a great wealth of recent research to produce a widely accessible and compelling, state-of-the-art treatment of this fascinating subject. Anyone interested in Californian biodiversity or grassland ecosystems in general will find this book to be an invaluable resource and a major inspiration for further research, management, and restoration efforts."—Bruce G. Baldwin, W. L. Jepson Professor and Curator, UC Berkeley "Grasses and grasslands are among the most important elements of the California landscape. This is their book, embodying the kind of integrated view needed for all ecological communities in California. Approaches ranging across an incredibly broad spectrum -- paleontology and human history; basic science and practical management techniques; systematics, community ecology, physiology, and genetics; physical factors such as water, soil nutrients, atmospherics, and fire; biological factors such as competition, symbiosis, and grazing -- are nicely tied together due to careful editorial work. This is an indispensable reference for everyone interested in the California environment."—Brent Mishler, Director of the University & Jepson Herbaria and Professor of Integrative Biology, UC Berkeley "The structure and function of California grasslands have intrigued ecologists for decades. The editors of this volume have assembled a comprehensive set of reviews by a group of outstanding authors on the natural history, structure, management, and restoration of this economically and ecologically important ecosystem."—Scott L. Collins, Professor of Biology, University of New Mexico