Download or read book Population and Comparative Genomics of Plant Pathogenic Bacteria written by Jeffrey Jones and published by Frontiers Media SA. This book was released on 2022-09-02 with total page 220 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Genomics of Plant Associated Bacteria written by Dennis C. Gross and published by Springer. This book was released on 2014-06-16 with total page 283 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes how genomics has revolutionized our scientific understanding of agriculturally important plant-associated bacteria. Each chapter focuses on the genomics of particular bacteria: the first described plant pathogen, Erwinia amylovora; phytoplasmas lacking cell walls; fastidious, phloem-restricted liberibacters; Pseudomonas syringae, which is a genetically tractable model system; Xanthomonas citri, which causes a disease that can devastate citrus crops and Pseudomonas fluorescens, which can protect plants from diseases. Topics considered in this volume include the importance of horizontal gene transfer in originating new bacterial strains and species and advances in transcriptomics that allow us to describe the complex regulatory networks critical to plant-microbe interactions. The availability of the Xanthomonas oryzae genome has led to new technologies in genome editing, which will revolutionize approaches to genetic engineering, even in eukaryotes. The contributions show how genomics has greatly accelerated progress toward understanding the biology of these bacteria and how that understanding can be translated into novel crop protection methods.

Download or read book Pseudomonas syringae Pathovars and Related Pathogens Identification Epidemiology and Genomics written by M’Barek Fatmi and published by Springer Science & Business Media. This book was released on 2008-06-03 with total page 416 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book reports on recent advances on: (1) new methods and approaches for specific and sensitive detection and identification of Pseudomonas syringae and Ralstonia solanacearum; (2) ecology and epidemiology bases of Pseudomonas syringae that enable the development of management strategies; (3) pathogenesis and determinant of pathogenicity, and in particular, mechanisms involved in virulence and virulence gene expression; (4) evolution and diversity of the pseudomonads through multilocus sequence typing (MLST) analysis; (5) determination of pathogens associated with new and emerging diseases; (6) effect of global warming on increase and emergence of new bacterial diseases."

Download or read book Evolutionary Trajectories in Plant Associated Pseudomonas and Xanthomonas Strains written by Marco Scortichini and published by Frontiers Media SA. This book was released on 2024-04-29 with total page 161 pages. Available in PDF, EPUB and Kindle. Book excerpt: The strict relationships between bacteria and plants represents one of the major facets of terrestrial ecology. Depending on the type of interaction and amount of metabolic advantage one organism can obtain from such relationships, these are classified as mutualistic, commensal or parasitic interactions. Within this context, Pseudomonas and Xanthomonas are bacterial genera with a worldwide spread, capable of establishing all of the above mentioned interactions with plants. Therefore, they represent good models for studying different lifestyles and, accordingly, deciphering distinct evolutionary trajectories followed by different lineages of a single genus to infect and/or to establish a mutualistic relationships with the plant. Some members of these two genera are regulated pests that are recognized as economically major threats for their host crop(s) both in temperate and tropical environments.

Download or read book Horizontal Gene Transfer in the Evolution of Pathogenesis written by Michael Hensel and published by Cambridge University Press. This book was released on 2008-06-30 with total page 335 pages. Available in PDF, EPUB and Kindle. Book excerpt: Horizontal gene transfer is a major driving force in the evolution of many bacterial pathogens. The development of high-throughput sequencing tools and more sophisticated genomic and proteomic techniques in recent years has resulted in a better understanding of this phenomenon. Written by leading experts in the field, this edited volume is aimed at graduate students and researchers and provides an overview of current knowledge relating to the evolution of microbial pathogenicity. This volume provides an overview of the mechanisms and biological consequences of the genome rearrangements resulting from horizontal gene transfer, in both prokaryotes and eukaryotes, as well as overviews of the key mobile genetic elements involved. Subsequent chapters focus on paradigms for the evolution of important bacterial pathogens, including Salmonella enterica, Streptococcus pneumoniae, and Staphylococcus aureus. The influence of socioeconomic parameters in the dissemination of transferable elements, such as antibiotic resistant genes in bacteria, is also discussed.

Download or read book Pseudomonas written by Bernd H. A. Rehm and published by John Wiley & Sons. This book was released on 2008-06-25 with total page 424 pages. Available in PDF, EPUB and Kindle. Book excerpt: Concise and up-to-date, this handy guide fills a gap in the literature by providing the essential knowledge for everyone with an interest in the topic. The result is a comprehensive overview of the most important model organism in applied microbiology that covers basic biology, pathology and biotechnological applications.

Download or read book Plant Disease Management in the Post Genomic Era From Functional Genomics to Genome Editing written by Sabrina Sarrocco and published by Frontiers Media SA. This book was released on 2020-03-16 with total page 205 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Download or read book Pseudomonas written by Juan-Luis Ramos and published by Springer Science & Business Media. This book was released on 2007-07-23 with total page 465 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume collects new information on the genomics of saprophytic soil Pseudomonas, as well as functions related to genomic islands. It explores life styles in different settings and sheds further insights on the wide metabolic potential of this microbe for the removal of pollutants and production of added-value products. This volume also explores how Pseudomonas responds and reacts to environmental signals, including detection of cell density.

Download or read book Microbial Ecology of Aerial Plant Surfaces written by Mark J. Bailey and published by CABI. This book was released on 2006 with total page 349 pages. Available in PDF, EPUB and Kindle. Book excerpt: All aerial plant surfaces, including leaves, stems and flowers are inhabited by diverse assemblages of microorganisms, including filamentous fungi, yeasts, bacteria, and bacteriophages. These organisms have profound effects on plant health and thus impact on ecosystem and agricultural functions. This book is based on proceedings from the 8th International Symposium on the mircobiology of aerial plant surfaces, held in Oxford 2005. This is a five yearly conference which brings together international scientists and provides a unique opportunity to discuss developments in this field.

Download or read book Plant Associated Bacteria written by Samuel S. Gnanamanickam and published by Springer Science & Business Media. This book was released on 2007-09-29 with total page 716 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume is envisioned as a resource for researchers working with beneficial and harmful groups of bacteria associated with crop plants. The book is divided into two parts, with Part I on beneficial bacteria including chapters on symbiotic nitrogen fixers and rhizosphere bacteria. The second part consists of detailed descriptions of 8 genera of plant pathogenic bacteria, including Agrobacterium and Herbaspirillum. Each chapter covers terminology, molecular phylogeny and more. soft-rot, Pseudomonas, Xanthomonas, Ralstonia, Burkholderia and Acidovorax There is an opening chapter on the plant-associated bacteria survey, molecular phylogeny, genomics and recent advances. And each chapter includes terminology/definitions, molecular phylogeny, methods that can be used (both traditional and latest molecular tools) and applications

Download or read book Molecular Aspects of Iron Metabolism in Pathogenic and Symbiotic Plant Microbe Associations written by Dominique Expert and published by Springer Science & Business Media. This book was released on 2012-08-23 with total page 92 pages. Available in PDF, EPUB and Kindle. Book excerpt: Iron plays a key role in biology as essential cofactor of numerous proteins. However, since it is only slightly soluble its bioavailability can be readily compromised under aerobic conditions. Moreover, due to its ability to catalyze the generation of free radicals, iron can also be toxic. Thus, it doesn’t surprise that living organisms have developed sophisticated means for acquiring iron whilst tightly controlling the intracellular concentrations of this metal in response to environmental conditions. Also, the critical role of iron has long been acknowledged in host vertebrate-parasite relationships where both partners compete for the acquisition of this essential element and activate complex signaling cascades to control their iron homeostasis during infection. Following the great interest that the mechanisms regulating the acquisition of iron and the control of iron homeostasis have generated among researchers studying plant-pathogen and legume-rhizobia interactions, this book offers a comprehensive analysis of irons’ various roles in the plant-microbial associations. The introductory chapter stresses the essentiality of iron in biological systems. The second chapter surveys the abundance of information on iron’s pivotal role in microbial plant pathogenesis and defence. Finally, the third chapter reviews the advances in our understanding of iron metabolism in the rhizobia, soil bacteria able to establish a symbiotic association with legumes and carry out nitrogen fixation. Molecular Aspects of Iron Metabolism in Pathogenic and Symbiotic Plant-Microbe Associations is a valuable resource to microbiologists, pathologists and scientists interested in iron uptake and metabolism in microbial pathogenesis, rhizobia legume associations, and plant physiology and immunity.

Download or read book Effectors in Plant Microbe Interactions written by Francis Martin and published by John Wiley & Sons. This book was released on 2012-01-03 with total page 442 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plants and microbes interact in a complex relationship that can have both harmful and beneficial impacts on both plant and microbial communities. Effectors, secreted microbial molecules that alter plant processes and facilitate colonization, are central to understanding the complicated interplay between plants and microbes. Effectors in Plant-Microbe Interactions unlocks the molecular basis of this important class of microbial molecules and describes their diverse and complex interactions with host plants. Effectors in Plant Microbe Interactions is divided into five sections that take stock of the current knowledge on effectors of plant-associated organisms. Coverage ranges from the impact of bacterial, fungal and oomycete effectors on plant immunity and high-throughput genomic analysis of effectors to the function and trafficking of these microbial molecules. The final section looks at effectors secreted by other eukaryotic microbes that are the focus of current and future research efforts. Written by leading international experts in plant-microbe interactions, Effectors in Plant Microbe Interactions, will be an essential volume for plant biologists, microbiologists, pathologists, and geneticists.

Download or read book The Hologenome Concept Human Animal and Plant Microbiota written by Eugene Rosenberg and published by Springer Science & Business Media. This book was released on 2014-01-31 with total page 187 pages. Available in PDF, EPUB and Kindle. Book excerpt: Groundbreaking research over the last 10 years has given rise to the hologenome concept of evolution. This concept posits that the holobiont (host plus all of its associated microorganisms) and its hologenome (sum of the genetic information of the host and its symbiotic microorganisms), acting in concert, function as a unique biological entity and therefore as a level of selection in evolution. All animals and plants harbor abundant and diverse microbiota, including viruses. Often the amount of symbiotic microorganisms and their combined genetic information far exceed that of their host. The microbiota with its microbiome, together with the host genome, can be transmitted from one generation to the next and thus propagate the unique properties of the holobiont. The microbial symbionts and the host interact in a cooperative way that affects the health of the holobiont within its environment. Beneficial microbiota protects against pathogens, provides essential nutrients, catabolizes complex polysaccharides, renders harmful chemicals inert, and contributes to the performance of the immune system. In humans and animals, the microbiota also plays a role in behavior. The sum of these cooperative interactions characterizes the holobiont as a unique biological entity. Genetic variation in the hologenome can be brought about by changes in either the host genome or the microbial population genomes (microbiome). Evolution by cooperation can occur by amplifying existing microbes, gaining novel microbiota and by acquiring microbial and viral genes. Under environmental stress, the microbiome can change more rapidly and in response to more processes than the host organism alone and thus influences the evolution of the holobiont. Prebiotics, probiotics, synbiotics and phage therapy are discussed as applied aspects of the hologenome concept.

Download or read book Stress and Environmental Regulation of Gene Expression and Adaptation in Bacteria written by Frans J. de Bruijn and published by John Wiley & Sons. This book was released on 2016-07-13 with total page 1472 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bacteria in various habitats are subject to continuously changing environmental conditions, such as nutrient deprivation, heat and cold stress, UV radiation, oxidative stress, dessication, acid stress, nitrosative stress, cell envelope stress, heavy metal exposure, osmotic stress, and others. In order to survive, they have to respond to these conditions by adapting their physiology through sometimes drastic changes in gene expression. In addition they may adapt by changing their morphology, forming biofilms, fruiting bodies or spores, filaments, Viable But Not Culturable (VBNC) cells or moving away from stress compounds via chemotaxis. Changes in gene expression constitute the main component of the bacterial response to stress and environmental changes, and involve a myriad of different mechanisms, including (alternative) sigma factors, bi- or tri-component regulatory systems, small non-coding RNA’s, chaperones, CHRIS-Cas systems, DNA repair, toxin-antitoxin systems, the stringent response, efflux pumps, alarmones, and modulation of the cell envelope or membranes, to name a few. Many regulatory elements are conserved in different bacteria; however there are endless variations on the theme and novel elements of gene regulation in bacteria inhabiting particular environments are constantly being discovered. Especially in (pathogenic) bacteria colonizing the human body a plethora of bacterial responses to innate stresses such as pH, reactive nitrogen and oxygen species and antibiotic stress are being described. An attempt is made to not only cover model systems but give a broad overview of the stress-responsive regulatory systems in a variety of bacteria, including medically important bacteria, where elucidation of certain aspects of these systems could lead to treatment strategies of the pathogens. Many of the regulatory systems being uncovered are specific, but there is also considerable “cross-talk” between different circuits. Stress and Environmental Regulation of Gene Expression and Adaptation in Bacteria is a comprehensive two-volume work bringing together both review and original research articles on key topics in stress and environmental control of gene expression in bacteria. Volume One contains key overview chapters, as well as content on one/two/three component regulatory systems and stress responses, sigma factors and stress responses, small non-coding RNAs and stress responses, toxin-antitoxin systems and stress responses, stringent response to stress, responses to UV irradiation, SOS and double stranded systems repair systems and stress, adaptation to both oxidative and osmotic stress, and desiccation tolerance and drought stress. Volume Two covers heat shock responses, chaperonins and stress, cold shock responses, adaptation to acid stress, nitrosative stress, and envelope stress, as well as iron homeostasis, metal resistance, quorum sensing, chemotaxis and biofilm formation, and viable but not culturable (VBNC) cells. Covering the full breadth of current stress and environmental control of gene expression studies and expanding it towards future advances in the field, these two volumes are a one-stop reference for (non) medical molecular geneticists interested in gene regulation under stress.

Download or read book New Perspectives and Approaches in Plant Growth Promoting Rhizobacteria Research written by P.A.H.M. Bakker and published by Springer Science & Business Media. This book was released on 2010-04-02 with total page 127 pages. Available in PDF, EPUB and Kindle. Book excerpt: In the context of increasing concern for food and environmental quality, use of Plant Growth-Promoting Rhizobacteria (PGPR) for reducing chemical inputs in agriculture is a potentially important issue. This book provides an update by renowned international experts on the most recent advances in the ecology of these important bacteria, the application of innovative methodologies for their study, their interaction with the host plant, and their potential application in agriculture.

Download or read book The Good The Bad and The Ugly Multiple Roles of Bacteria in Human Life written by Tatiana Venkova and published by Frontiers Media SA. This book was released on 2018-10-17 with total page 518 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bacteria are among the earliest forms of life on Earth. Notwithstanding their small size and primitive origin, bacteria still have a tremendous impact on everyday human life. Over the centuries, research into bacteria have provided and enriched the fundamental biological knowledge due to their readily measured processes and effects on higher organisms. Although molecular genetics and microbiology were among the scientific fields that have mostly benefited from the discoveries made in bacteria, our current state of knowledge has gone beyond what anyone could have ever imagined. The present Research Topic aims to cover new and exciting broad aspects of the importance of bacteria to human life, both positive and negative influences. Regulation of bacterial gene expression, replication and segregation control mechanisms, cell to cell communication via quorum sensors, and the relatively recent finding of bacterial immunity via CRISPR, have led to the development of many, and very important new tools in biotechnology and the emerging field of molecular medicine. The battle against infectious diseases has also benefited from the genetic approaches that have been developed in the quest for finding new targets and novel drugs against pathogenic bacteria. At the next level, the human microbiome project has opened up new avenues in understanding the role of bacteria in human health and wellbeing. Finally, the relationship between bacterial infections and human cancers will also be covered, a subject that is still under verification through rigorous experimental approaches. Special emphasis will be given to the bacterial accessory genome, i.e the mobilome, as the primary cause of health-threatening antimicrobial resistance and the production of toxins and virulence factors. Taking into account the evolutionary importance of horizontal gene transfer and the additional beneficial roles of certain bacterial mobile genetic elements, they help project best “the Good, the Bad and the Ugly” outline of this topic. At the time this eBook is about to be published, our Research Topic has registered nearly 55, 000 views.

Download or read book Biotechnology and Plant Disease Management written by Zamir K. Punja and published by CABI. This book was released on 2007-01-01 with total page 591 pages. Available in PDF, EPUB and Kindle. Book excerpt: As agricultural production increases to meet the demands of a growing world population, so has the pace of biotechnology research to combat plant disease. Diseases can be caused by a variety of complex plant pathogens including fungi, bacteria, viruses and nematodes, and their management requires the use of techniques in transgenic technology, biochemistry and genetics. While texts exist on specific pathogens or management practices, a comprehensive review is needed of recent developments in modern techniques and the understanding of how pathogens cause disease. This collection of studies discusses the key approaches to managing each group of pathogens within the context of recent developments in biotechnology. Broad themes include microbe-plant interactions, molecular diagnostics of plant pathogens and enhancing the resistance of plants.