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Book Salmonid Field Protocols Handbook

Download or read book Salmonid Field Protocols Handbook written by David H. Johnson and published by . This book was released on 2007 with total page 504 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the first publication to collect, standardize, and recommend a scientifically rigorous set of field protocols for monitoring and assessing salmon and trout populations. Includes five additional techniques that can be used with any of the 13 principle methods to supplement information gathered.Over four dozen fisheries experts throughout the U.S. Pacific Northwest and beyond contributed their time to pick, write, and review the most reliable protocols for enumerating salmonids in the field. Presented in an easy to use format, each of the 18 peer-reviewed protocols covers objectives, sample design, data handling, personnel and operational requirements, and field and office techniques, including survey forms.Standardized monitoring protocols will improve data reliability, maximize opportunities for data sharing and data set comparability, and ultimately improve the ability to assess status and trends. The Handbook will also support consistency in data collection for salmonids at the international level.

Book Stock Identification of Columbia River Chinook Salmon and Steelhead Trout  1986 Final Report

Download or read book Stock Identification of Columbia River Chinook Salmon and Steelhead Trout 1986 Final Report written by and published by . This book was released on 1986 with total page 189 pages. Available in PDF, EPUB and Kindle. Book excerpt: For the first time genetic similarities among chinook salmon and among steelhead trout stocks of the Columbia River were determined using a holistic approach including analysis of life history, biochemical, body shape and meristic characters. We examined between year differences for each of the stock characteristics and we also correlated the habitat characteristics with the wild stock characteristics. The most important principle for managing stocks of Columbia River chinook salmon and steelhead trout is that geographically proximal stocks tend to be like each other. Run timing and similarity of the stream systems should be taken into account when managing stocks. There are similarities in the classifications derived for chinook salmon and steelhead trout. Steelhead trout or chinook salmon tend to be genetically similar to other steelhead or chinook stocks, respectively, that originate from natal streams that are geographically close, regardless of time of freshwater entry. The primary exception Lo this trend is between stocks of spring and fall chinook in the upper Columbia River where fish with the different run timings are dissimilar, though geographically proximate stocks within a run form are generally very similar. Spring chinook stocks have stronger affinities to other spring chinook stocks that originate in the same side of the Cascade Range than to these Spring chinook stock: spawned on the other side of the Cascade Range. Spring chinook from west of the Cascades are more closely related to fall chinook than they are to spring chinook from east of the Cascades. Summer chinook can be divided into two main groups: (1) populations in the upper Columbia River that smolt as subyearlings and fall chinook stocks; and (2) summer chinook stocks from the Salmon River, Idaho, which smolt as yearlings and are similar to spring chinook stocks from Idaho. Fall chinook appear to comprise one large diverse group that is not easily subdivided into smaller subgroups. In general, upriver brights differ from tules by at least one locus. Steelhead stocks can be divided into two main groups: (1) those stocks found east of the Cascades; and (2) those stocks found west of the Cascade Mountains. Steelhead from west of the Cascades are divisable into three subgroups of closely related stocks: (1) a group comprised mainly of wild winter steelhead from the lower Columbia River; (2) Willamette River hatchery and wild winter steelhead; and (3) summer and winter hatchery steelhead stocks from both the lower Columbia and Willamette Rivers. Steelhead from east of the Cascades are separable into three subgroups of closely related stocks: (1) wild summer steelhead; (2) a group comprised mainly of hatchery summer steelhead stocks; and (3) other hatchery and wild steelhead from Idaho. Streams east and west of the Cascades can be differentiated using characters including precipitation, elevation, distance from the mouth of the Columbia, number of frost-free days and minimum annual air temperature. There are significant differences among the stocks of chinook salmon and steelhead trout for each of the meristic and body shape characters. Between year variation does not account for differences among the stocks for the meristic and body shape characters with the exception of pelvic fin ray number in steelhead trout. Characters based on body shape are important for discriminating between the groups of hatchery and wild steelhead stocks. We could not determine whether the basis for the differences were genetic or environmental. The reason for the variation of the characters among stocks is as yet unclear. Neutrality or adaptiveness has not been firmly demonstrated.

Book Monitoring and Evaluation of Smolt Migration in the Columbia River Basin

Download or read book Monitoring and Evaluation of Smolt Migration in the Columbia River Basin written by Caitlin Burgess and published by . This book was released on 2004 with total page 151 pages. Available in PDF, EPUB and Kindle. Book excerpt: Program RealTime provided monitoring and forecasting of the 2003 inseason outmigrations via the internet for 33 PIT-tagged stocks of wild ESU chinook [sic] salmon and steelhead to Lower Granite and/or McNary dams, two PIT-tagged hatchery-reared ESU of sockeye salmon to Lower Granite Dam, and 15 passage-indexed runs-at-large, five each to Rock Island, McNary, and John Day Dams. All of the 23 stocks of wild yearling chinook salmon which were captured, PIT-tagged, and released at sites above Lower Granite Dam in 2002, have been monitored at least once before the 2003 migration. These stocks originate in drainages of the Salmon, Grande Ronde and Clearwater Rivers, all tributaries to the Snake River, and are subsequently detected to the tag identification and monitored at Lower Granite Dam. In a continuation from the previous two years, seven wild PIT-tagged runs-at-large of Snake or Upper Columbia River ESU salmon and steelhead were monitored at McNary Dam. Two wild PIT-tagged runs-at-large were monitored at Lower Granite Dam, the yearling and subyearling chinook salmon and the steelhead trout runs. The hatchery-reared PIT-tagged sockeye salmon stocks outmigrating to Lower Granite Dam consisted of a stock from Alturas Lake and one from Redfish Lake. The passage-indexed stocks (stocks monitored by FPC passage indices) included combined wild and hatchery runs-at-large of subyearling and yearling chinook, coho, and sockeye salmon, and steelhead trout forecasted to Rock Island, McNary, and John Day Dams.

Book Monitoring and Evaluation of Smolt Migration in the Columbia River Basin

Download or read book Monitoring and Evaluation of Smolt Migration in the Columbia River Basin written by Caitlin Burgess and published by . This book was released on 2000 with total page 88 pages. Available in PDF, EPUB and Kindle. Book excerpt: Program RealTime provided tracking and forecasting of the 1999 inseason outmigration via the internet for stocks of wild PIT-tagged spring/summer chinook salmon. These stocks were ESUs from sixteen release sites above Lower Granite dam, including Bear Valley Creek, Big Creek, Cape Horn Creek, Catherine Creek, Elk Creek, Herd Creek, Imnaha River, Lake Creek, Loon Creek, Lostine River, Marsh Creek, Minam River, South Fork Salmon River, and Secesh River, Sulfur Creek and Valley Creek. Forecasts were also provided for a stock of hatchery-reared PIT-tagged summer-run sockeye salmon from Redfish Lake and for the runs-at-large of Snake River wild yearling chinook salmon, and steelhead trout. The 1999 RealTime project began making forecasts for a new stock of PIT-tagged wild fall subyearling chinook salmon, as a substitute for forecasts of the wild run-at-large, discontinued June 6. Forecasts for the run-at-large were discontinued when a large release of unmarked hatchery fish into the Snake River made identification of wild fish impossible. The 1999 Program RealTime performance was comparable to its performance in previous years with respect to the run-at-large of yearling chinook salmon (whole season MAD=3.7%), and the run of hatchery-reared Redfish Lake sockeye salmon (whole season MAD=6.7%). Season-wide performance of program RealTime predictions for wild Snake River yearling chinook salmon ESUs improved in 1999, with mean MADs from the first half of the outmigrations down from 15.1% in 1998 to 4.5% in 1999. RealTime performance was somewhat worse for the run-at-large of steelhead trout in 1999, compared to 1998, particularly during the last half of the outmigration when the MAD increased from 2.7% in 1998 to 6.1% in 1999. A pattern of over-predictions was observed in half of the yearling chinook salmon ESUs and the steelhead run-at-large during the month of May. Lower-than-average outflows were observed at Lower Granite dam during the first half of May, the only period of low flows in an year with otherwise higher-than-average-flows. The passage distribution of the stock new to the RealTime forecasting project, the PIT tagged stock of fall subyearling chinook salmon, was predicted with very good accuracy (whole season MAD=4.7%), particularly during the last half of the outmigration (MAD=3.6%). The RealTime project reverted to a pre-1998 method of adjusting PIT-tagged smolt counts at Lower Granite Dam because of its superior performance during the last half of the outmigration.

Book Monitoring and Evaluation of Smolt Migration in the Columbia River Basin

Download or read book Monitoring and Evaluation of Smolt Migration in the Columbia River Basin written by Caitlin Burgess and published by . This book was released on 2000 with total page 122 pages. Available in PDF, EPUB and Kindle. Book excerpt: Program RealTime provided tracking and forecasting of the 2000 in season outmigration via the internet for stocks of wild PIT-tagged spring/summer chinook salmon. These stocks were ESUs from nineteen release sites above Lower Granite dam, including Bear Valley Creek, Big Creek, Camas Creek (new), Cape Horn Creek, Catherine Creek, Elk Creek, Herd Creek, Imnaha River, Johnson Creek (new), Lake Creek, Loon Creek, Lostine River, Marsh Creek, Minam River, East Fork Salmon River (new), South Fork Salmon River, Secesh River, Sulfur Creek and Valley Creek. Forecasts were also provided for two stocks of hatchery-reared PIT-tagged summer-run sockeye salmon, from Redfish Lake and Alturas Lake (new); for a subpopulation of the PIT-tagged wild Snake River fall subyearling chinook salmon; for all wild Snake River PIT-tagged spring/summer yearling chinook salmon (new) and steelhead trout (new)detected at Lower Granite Dam during the 2000 outmigration. The 2000 RealTime project began making forecasts for combined wild- and hatchery-reared runs-at-large of subyearling and yearling chinook, coho, and sockeye salmon, and steelhead trout migrating to Rock Island and McNary Dams on the mid-Columbia River and the mainstem Columbia River. Due to the new (in 1999-2000) Snake River basin hatchery protocol of releasing unmarked hatchery-reared fish, the RealTime forecasting project no longer makes run-timing forecasts for wild Snake River runs-at-large using FPC passage indices, as it has done for the previous three years (1997-1999). The season-wide measure of Program RealTime performance, the mean absolute difference (MAD) between in-season predictions and true (observed) passage percentiles, improved relative to previous years for nearly all stocks. The average season-wide MAD of all (nineteen) spring/summer yearling chinook salmon ESUs dropped from 5.7% in 1999 to 4.5% in 2000. The 2000 MAD for the hatchery-reared Redfish Lake sockeye salmon ESU was the lowest recorded, at 6.0%, down from 6.7% in 1999. The MAD for the PIT-tagged ESU of wild Snake River fall sub-yearling chinook salmon, after its second season of run-timing forecasting, was 4.7% in 2000 compared to 5.5% in 1999. The high accuracy of season-wide performance in 2000 was largely due to exceptional Program RealTime performance in the last half of the season. Passage predictions from fifteen of the sixteen spring/summer yearling chinook salmon ESUs available for comparison improved in 2000 compared to 1999. The last-half average MAD over all the yearling chinook salmon ESUs was 4.3% in 2000, compared to 6.5% in 1999. Program RealTime 2000 first-half forecasting performance was slightly worse than that of 1999 (MAD = 4.5%), but still comparable to previous years with a MAD equal to 5.1%. Three yearling chinook ESUs showed moderately large (> 10%) MADs. These stocks had larger-than-average recapture percentages in 2000, producing over-predictions early in the season, in a dynamic reminiscent of migration year 1998 (Burgess et al., 1999). The passage distribution of the new stock of hatchery-reared sockeye salmon from Alturas Lake was well-predicted by Program RealTime, based on only two years of historical data (whole-season MAD = 4.3%). The two new run-of-the-river PIT-tagged stocks of wild yearling chinook salmon and steelhead trout were predicted with very good accuracy (whole-season MADs were 4.8% for steelhead trout and 1.7% for yearling chinook salmon), particularly during the last half of the outmigration. First-half steelhead predictions were among the season's worst (MAD = 10.8%), with over-predictions attributable to the largest passage on record of wild PIT-tagged steelhead trout to Lower Granite Dam. The results of RealTime predictions of passage percentiles of combined wild and hatchery-reared salmonids to Rock Island and McNary were mixed. Some of these passage-indexed runs-at-large were predicted with exceptional accuracy (whole-season MADs for coho salmon outmigrating to Rock Island Dam and McNary Dam were, respectively, 0.58% and 1.24%; for yearling chinook to McNary, 0.59%) while others were not forecast well at all (first-half MADs of sockeye salmon migrating to Rock Island and McNary Dams, respectively, were 19.25% and 12.78%). The worst performances for these mid- and mainstem-Columbia River runs-at-large were probably due to large hatchery release disturbing the smoothly accumulating percentages of normal fish passage. The RealTime project used a stock-specific method of upwardly adjusting PIT-tagged smolt counts at Lower Granite Dam. For chinook and sockeye salmon, the project continued using the 1999 formulation for spill-adjustment. For the new stock of wild PIT-tagged steelhead trout, a formula derived for steelhead trout only was used.

Book Information on Coho and Chinook Salmon Stocks Originating in Puget Sound and Washington Coastal Streams North of the Columbia River

Download or read book Information on Coho and Chinook Salmon Stocks Originating in Puget Sound and Washington Coastal Streams North of the Columbia River written by Gilbert A. Holland and published by . This book was released on 1973 with total page 5 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book Monitoring and Evaluation of Smolt Migration in the Columbia River Basin

Download or read book Monitoring and Evaluation of Smolt Migration in the Columbia River Basin written by and published by . This book was released on 1998 with total page 88 pages. Available in PDF, EPUB and Kindle. Book excerpt: Program RealTime provided tracking and forecasting of the 1999 inseason outmigration via the internet for stocks of wild PIT-tagged spring/summer chinook salmon. These stocks were ESUs from sixteen release sites above Lower Granite dam, including Bear Valley Creek, Big Creek, Cape Horn Creek, Catherine Creek, Elk Creek, Herd Creek, Imnaha River, Lake Creek, Loon Creek, Lostine River, Marsh Creek, Minam River, South Fork Salmon River, and Secesh River, Sulfur Creek and Valley Creek. Forecasts were also provided for a stock of hatchery-reared PIT-tagged summer-run sockeye salmon from Redfish Lake and for the runs-at-large of Snake River wild yearling chinook salmon, and steelhead trout. The 1999 RealTime project began making forecasts for a new stock of PIT-tagged wild fall subyearling chinook salmon, as a substitute for forecasts of the wild run-at-large, discontinued June 6. Forecasts for the run-at-large were discontinued when a large release of unmarked hatchery fish into the Snake River made identification of wild fish impossible. The 1999 Program RealTime performance was comparable to its performance in previous years with respect to the run-at-large of yearling chinook salmon (whole season MAD=3.7%), and the run of hatchery-reared Redfish Lake sockeye salmon (whole season MAD=6.7%). Season-wide performance of program RealTime predictions for wild Snake River yearling chinook salmon ESUs improved in 1999, with mean MADs from the first half of the outmigrations down from 15.1% in 1998 to 4.5% in 1999. RealTime performance was somewhat worse for the run-at-large of steelhead trout in 1999, compared to 1998, particularly during the last half of the outmigration when the MAD increased from 2.7% in 1998 to 6.1% in 1999. A pattern of over-predictions was observed in half of the yearling chinook salmon ESUs and the steelhead run-at-large during the month of May. Lower-than-average outflows were observed at Lower Granite dam during the first half of May, the only period of low flows in an year with otherwise higher-than-average-flows. The passage distribution of the stock new to the RealTime forecasting project, the PIT tagged stock of fall subyearling chinook salmon, was predicted with very good accuracy (whole season MAD=4.7%), particularly during the last half of the outmigration (MAD=3.6%). The RealTime project reverted to a pre-1998 method of adjusting PIT-tagged smolt counts at Lower Granite Dam because of its superior performance during the last half of the outmigration.

Book Monitoring and Evaluation of Smolt Migration in the Columbia River Basin

Download or read book Monitoring and Evaluation of Smolt Migration in the Columbia River Basin written by and published by . This book was released on 1998 with total page 122 pages. Available in PDF, EPUB and Kindle. Book excerpt: Program RealTime provided tracking and forecasting of the 2000 in season outmigration via the internet for stocks of wild PIT-tagged spring/summer chinook salmon. These stocks were ESUs from nineteen release sites above Lower Granite dam, including Bear Valley Creek, Big Creek, Camas Creek (new), Cape Horn Creek, Catherine Creek, Elk Creek, Herd Creek, Imnaha River, Johnson Creek (new), Lake Creek, Loon Creek, Lostine River, Marsh Creek, Minam River, East Fork Salmon River (new), South Fork Salmon River, Secesh River, Sulfur Creek and Valley Creek. Forecasts were also provided for two stocks of hatchery-reared PIT-tagged summer-run sockeye salmon, from Redfish Lake and Alturas Lake (new); for a subpopulation of the PIT-tagged wild Snake River fall subyearling chinook salmon; for all wild Snake River PIT-tagged spring/summer yearling chinook salmon (new) and steelhead trout (new)detected at Lower Granite Dam during the 2000 outmigration. The 2000 RealTime project began making forecasts for combined wild- and hatchery-reared runs-at-large of subyearling and yearling chinook, coho, and sockeye salmon, and steelhead trout migrating to Rock Island and McNary Dams on the mid-Columbia River and the mainstem Columbia River. Due to the new (in 1999-2000) Snake River basin hatchery protocol of releasing unmarked hatchery-reared fish, the RealTime forecasting project no longer makes run-timing forecasts for wild Snake River runs-at-large using FPC passage indices, as it has done for the previous three years (1997-1999). The season-wide measure of Program RealTime performance, the mean absolute difference (MAD) between in-season predictions and true (observed) passage percentiles, improved relative to previous years for nearly all stocks. The average season-wide MAD of all (nineteen) spring/summer yearling chinook salmon ESUs dropped from 5.7% in 1999 to 4.5% in 2000. The 2000 MAD for the hatchery-reared Redfish Lake sockeye salmon ESU was the lowest recorded, at 6.0%, down from 6.7% in 1999. The MAD for the PIT-tagged ESU of wild Snake River fall sub-yearling chinook salmon, after its second season of run-timing forecasting, was 4.7% in 2000 compared to 5.5% in 1999. The high accuracy of season-wide performance in 2000 was largely due to exceptional Program RealTime performance in the last half of the season. Passage predictions from fifteen of the sixteen spring/summer yearling chinook salmon ESUs available for comparison improved in 2000 compared to 1999. The last-half average MAD over all the yearling chinook salmon ESUs was 4.3% in 2000, compared to 6.5% in 1999. Program RealTime 2000 first-half forecasting performance was slightly worse than that of 1999 (MAD = 4.5%), but still comparable to previous years with a MAD equal to 5.1%. Three yearling chinook ESUs showed moderately large (> 10%) MADs. These stocks had larger-than-average recapture percentages in 2000, producing over-predictions early in the season, in a dynamic reminiscent of migration year 1998 (Burgess et al., 1999). The passage distribution of the new stock of hatchery-reared sockeye salmon from Alturas Lake was well-predicted by Program RealTime, based on only two years of historical data (whole-season MAD = 4.3%). The two new run-of-the-river PIT-tagged stocks of wild yearling chinook salmon and steelhead trout were predicted with very good accuracy (whole-season MADs were 4.8% for steelhead trout and 1.7% for yearling chinook salmon), particularly during the last half of the outmigration. First-half steelhead predictions were among the season's worst (MAD = 10.8%), with over-predictions attributable to the largest passage on record of wild PIT-tagged steelhead trout to Lower Granite Dam. The results of RealTime predictions of passage percentiles of combined wild and hatchery-reared salmonids to Rock Island and McNary were mixed. Some of these passage-indexed runs-at-large were predicted with exceptional accuracy (whole-season MADs for coho salmon outmigrating to Rock Island Dam and McNary Dam were, respectively, 0.58% and 1.24%; for yearling chinook to McNary, 0.59%) while others were not forecast well at all (first-half MADs of sockeye salmon migrating to Rock Island and McNary Dams, respectively, were 19.25% and 12.78%). The worst performances for these mid- and mainstem-Columbia River runs-at-large were probably due to large hatchery release disturbing the smoothly accumulating percentages of normal fish passage. The RealTime project used a stock-specific method of upwardly adjusting PIT-tagged smolt counts at Lower Granite Dam. For chinook and sockeye salmon, the project continued using the 1999 formulation for spill-adjustment. For the new stock of wild PIT-tagged steelhead trout, a formula derived for steelhead trout only was used.

Book Columbia River Stock Identification Study  Project 79 1

Download or read book Columbia River Stock Identification Study Project 79 1 written by Fred Utter and published by . This book was released on 1981 with total page 46 pages. Available in PDF, EPUB and Kindle. Book excerpt: "Research Objectives: 1. To obtain a sufficient data base from chinook salmon populations beyond the Columbia river to reliable estimate the proportions of different Columbia River stocks taken in ocean fisheries. 2. To refine the data base of the Columbia River to permit more precise estimates of Columbia river origins in mixed populations of the Columbia River & the ocean. 3. To demonstrate the usefulness of these methods through analysis of mixed fishery data of the Pacific Ocean. 4. To promote the use and support of these methods by appropriate management agencies" -- Page i.

Book Fish and Wildlife Implementation Plan

Download or read book Fish and Wildlife Implementation Plan written by and published by . This book was released on 2003 with total page 642 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book Oregon Ocean Salmon Fisheries

Download or read book Oregon Ocean Salmon Fisheries written by and published by . This book was released on 1993 with total page 122 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book The Distribution and Aggregation of Chinook Salmon Stocks on the Oregon Shelf as Indicated by the Commercial Catch and Genetics

Download or read book The Distribution and Aggregation of Chinook Salmon Stocks on the Oregon Shelf as Indicated by the Commercial Catch and Genetics written by Robert Carey Ireland and published by . This book was released on 2011 with total page 114 pages. Available in PDF, EPUB and Kindle. Book excerpt: Project CROOS, Collaborative Research on Oregon Ocean Salmon, is a unique partnership of scientists and commercial fishermen that combines catch location data with stock assignments obtained from genetic micro-satellite analysis to investigate the distribution of Oregon Chinook across multiple spatial scales. Using catch data collected by collaborating Oregon troll fishermen, we investigated the distribution of individual populations of Chinook salmon along the nearshore regions of the Oregon Coast. The study focused on two distinct spatial scales: 1) the coast-wide, latitudinal distribution of the 13 most abundant stocks that contributed to the Oregon catch in 2007, and 2) stock-based patterns of Chinook aggregation on spatial scales as low as tens to hundreds of meters. The description of spatial distribution was performed over time periods as short as two days and in season-long summaries. Based on 2007 catch data, we report three separate patterns in the coastal distribution of Oregon-caught Chinook. Stocks from the Sacramento River, Mid-Oregon Coast and Upper Columbia basin were distributed coast-wide in the Oregon catch. Chinook salmon that originated from northern California and southern Oregon were found to be more abundant south of 44° North - the approximate latitude of the coastal town of Florence, Oregon. Stocks from the north Oregon coast and the lower Columbia basin were primarily taken north of 44° North. We describe in-season and annual changes in the relative contribution of discrete stocks and in the age-structure of these stocks. Using distance-based metrics compared to random permutations, we found evidence from the ocean catch that Chinook salmon were sometimes closely proximate to river cohorts at sea. However, these discreet stocks were generally intermingled with other stocks in mixed-stock aggregations.

Book Federal Register

Download or read book Federal Register written by and published by . This book was released on 1999-03-23 with total page 1016 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book Strategies for Recovery of Snake River Salmon

Download or read book Strategies for Recovery of Snake River Salmon written by and published by . This book was released on 1990 with total page 40 pages. Available in PDF, EPUB and Kindle. Book excerpt: