Download or read book Analysis of Nuclear Transport Signals written by Silvana Wolf and published by GRIN Verlag. This book was released on 2017-05-09 with total page 75 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bachelor Thesis from the year 2015 in the subject Computer Science - Bioinformatics, Technical University of Munich, language: English, abstract: Nuclear transport of proteins is a basic cellular mechanism preceding a lot of biological processes. The classical transport mechanism for nuclear proteins involves karyopherins importing and exporting the proteins. The karyopherins recognize typically nuclear transport signals in the protein sequence. Three main types of nuclear localization signals (NLS) are focused in the scientific field of nuclear protein transport: monopartite, bipartite and PY-NLS. In studies on nuclear export signals (NES) the specific type of leucine-rich signals is often investigated. The first goal of this thesis was to update NLSdb, a database containing 114 experimental and 194 potential NLS, to the current state of available data. Towards this end, a set of 2452 novel signals with published experimental evidence was extracted from the literature and used as development set. An in silico mutagenesis approach was applied to this set to detect 4301 novel potential NLS in nuclear proteins. We matched these potential NLS in protein sequences of unannotated subcellular localization to identify nuclear proteins. We were able to confirm the predicted localization using our potential NLS in literature. Additional to the collection of data, an extensive analysis on protein sequences containing NLS and NES was performed to provide insights into subcellular localization of proteins and their occurrence in various organisms. A clustering of sequences of NLS led to the separation of signals into distinct sub-groups with a clear definition of a consensus sequence for each sub-group. Aligning potential NLS against the sub-groups resulted in a refinement of the consensus sequences. The results from this study reflect the scientific progress, lead to further knowledge in the field of nuclear transport and highlight the usability of bioinformatics methods for the discovery of new insights in biology. Nuclear transport is related to many interesting researches, for example allergic reactions, cancer and other diseases. The outcome of this work provides a good fundament for other studies with nuclear transport signals.
Download or read book Molecular Biology of the Cell written by and published by . This book was released on 2002 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Nuclear Import and Export in Plants and Animals written by Tzvi Tzfira and published by Springer Science & Business Media. This book was released on 2007-02-25 with total page 239 pages. Available in PDF, EPUB and Kindle. Book excerpt: Nuclear Import and Export in Plants and Animals provides insight into the remarkable mechanisms of nuclear import and export. This book covers a range of topics from the nuclear pore structure, to nuclear import and export of macromolecules in plant and animal cells. In addition, the book covers the special cases of nuclear import of Agrobacterium T-DNA during plant genetic transformation, nuclear import and export of animal viruses, and nuclear intake of foreign DNA. A chapter on research methods to study nuclear transport concludes the book.
Download or read book Nuclear Transport written by Karsten Weis and published by Springer Science & Business Media. This book was released on 2002 with total page 222 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bidirectional traffic of macromolecules across the nuclear envelope is an active and essential transport process in all eukaryotic cells. Work on various model systems has led to a tremendous increase in our understanding of nuclear transport in recent years. This volume summarizes our current knowledge of protein and RNA transport into and out of the nucleus. It contains nine up-to-date reviews which cover various aspects of nucleocytoplasmic transport, including the structure and function of the nuclear pore complex, the role of soluble transport factors in protein and RNA transport, and the regulation of protein transport through the nuclear pore.
Download or read book Identification of Nuclear Export Signals and Structural Analysis of Transport Complexes written by and published by . This book was released on 2012 with total page 155 pages. Available in PDF, EPUB and Kindle. Book excerpt: The nucleus is a vital sub cellular compartment and it stores the genome. Transport across the nuclear envelope occurs through Nuclear Pore Complexes (NPC) and cargo traffic across the NPCs is a highly specific and controlled process. Facilitated transport processes are executed by Nuclear Transport Receptors (NTR). The goals of my doctoral work have been divided in two broad themes, which have been summarized below. Identification of Nuclear Export Signals for CRM1 mediated export: The nucleus is specialised in transcription and the cytosol is specialised in translation. Nuclear translatio...
Download or read book Nucleocytoplasmic Transport written by Reiner Peters and published by . This book was released on 1986-11-01 with total page 316 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Download or read book Nuclear Cytoplasmic Transport written by Weidong Yang and published by Springer. This book was released on 2018-07-27 with total page 277 pages. Available in PDF, EPUB and Kindle. Book excerpt: Dysfunction of nuclear-cytoplasmic transport systems has been associated with many human diseases. Thus, understanding of how functional this transport system maintains, or through dysfunction fails to maintain remains the core question in cell biology. In eukaryotic cells, the nuclear envelope (NE) separates the genetic transcription in the nucleus from the translational machinery in the cytoplasm. Thousands of nuclear pore complexes (NPCs) embedded on the NE selectively mediate the bidirectional trafficking of macromolecules such as RNAs and proteins between these two cellular compartments. In this book, the authors integrate recent progress on the structure of NPC and the mechanism of nuclear-cytoplasmic transport system in vitro and in vivo.
Download or read book Bioinformatics written by Pierre Baldi and published by MIT Press (MA). This book was released on 1998 with total page 351 pages. Available in PDF, EPUB and Kindle. Book excerpt: An unprecedented wealth of data is being generated by genome sequencing projects and other experimental efforts to determine the structure and function of biological molecules. The demands and opportunities for interpreting these data are expanding more than ever. Biotechnology, pharmacology, and medicine will be particularly affected by the new results and the increased understanding of life at the molecular level. Bioinformatics is the development and application of computer methods for analysis, interpretation, and prediction, as well as for the design of experiments. It has emerged as a strategic frontier between biology and computer science. Machine learning approaches (e.g., neural networks, hidden Markov models, and belief networks) are ideally suited for areas where there is a lot of data but little theory—and this is exactly the situation in molecular biology. As with its predecessor, statistical model fitting, the goal in machine learning is to extract useful information from a body of data by building good probabilistic models. The particular twist behind machine learning, however, is to automate the process as much as possible. In this book, Pierre Baldi and Soren Brunak present the key machine learning approaches and apply them to the computational problems encountered in the analysis of biological data. The book is aimed at two types of researchers and students. First are the biologists and biochemists who need to understand new data-driven algorithms, such as neural networks and hidden Markov models, in the context of biological sequences and their molecular structure and function. Second are those with a primary background in physics, mathematics, statistics, or computer science who need to know more about specific applications in molecular biology.
Download or read book Epigenetic Regulation of Skin Development and Regeneration written by Vladimir A. Botchkarev and published by Springer. This book was released on 2018-09-03 with total page 330 pages. Available in PDF, EPUB and Kindle. Book excerpt: This indispensable volume highlights recent studies identifying epigenetic mechanisms as essential regulators of skin development, stem cell activity and regeneration. Chapters are contributed by leading experts and promote the skin as an accessible model system for studying mechanisms that control organ development and regeneration. The timely discussions contained throughout are of broad relevance to other areas of biology and medicine and can help inform the development of novel therapeutics for skin disorders as well as new approaches to skin regeneration that target the epigenome. Part of the highly successful Stem Cells and Regenerative Medicine series, Epigenetic Regulation of Skin Development and Regeneration uncovers the fundamental significance of epigenetic mechanisms in skin development and regeneration, and emphasizes the development of new therapies for a number of skin disorders, such as pathological conditions of epidermal differentiation, pigmentation and carcinogenesis. At least six categories of researchers will find this book essential, including stem cell, developmental, hair follicle or molecular biologists, and gerontologists or clinical dermatologists.
Download or read book Nuclear Architecture and Dynamics written by Christophe Lavelle and published by Academic Press. This book was released on 2017-10-27 with total page 620 pages. Available in PDF, EPUB and Kindle. Book excerpt: Nuclear Architecture and Dynamics provides a definitive resource for (bio)physicists and molecular and cellular biologists whose research involves an understanding of the organization of the genome and the mechanisms of its proper reading, maintenance, and replication by the cell. This book brings together the biochemical and physical characteristics of genome organization, providing a relevant framework in which to interpret the control of gene expression and cell differentiation. It includes work from a group of international experts, including biologists, physicists, mathematicians, and bioinformaticians who have come together for a comprehensive presentation of the current developments in the nuclear dynamics and architecture field. The book provides the uninitiated with an entry point to a highly dynamic, but complex issue, and the expert with an opportunity to have a fresh look at the viewpoints advocated by researchers from different disciplines. - Highlights the link between the (bio)chemistry and the (bio)physics of chromatin - Deciphers the complex interplay between numerous biochemical factors at task in the nucleus and the physical state of chromatin - Provides a collective view of the field by a large, diverse group of authors with both physics and biology backgrounds
Download or read book Nuclear Pore Complexes and Nucleocytoplasmic Transport Methods written by and published by Elsevier. This book was released on 2014-05-20 with total page 553 pages. Available in PDF, EPUB and Kindle. Book excerpt: Volume 122 of Methods in Cell Biology describes modern tools and techniques used to study nuclear pore complexes and nucleocytoplasmic transport in diverse eukaryotic model systems (including mammalian cells, Xenopus, C. elegans, yeast). The volume enables investigators to analyze nuclear pore complex structure, assembly, and dynamics; to evaluate protein and RNA trafficking through the nuclear envelope; and to design in vivo or in vitro assays appropriate to their research needs. Beyond the study of nuclear pores and transport as such, these protocols will also be helpful to scientists characterizing gene regulation, signal transduction, cell cycle, viral infections, or aging. The NPC being one of the largest multiprotein complexes in the cell, some protocols will also be of interest for people currently characterizing other macromolecular assemblies. This book is thus designed for laboratory use by graduate students, technicians, and researchers in many molecular and cellular disciplines. Describes modern tools and techniques used to study nuclear pore complexes and nucleocytoplasmic transport in diverse eukaryotic model systems (mammalian cells, Xenopus, C. elegans, yeast) Chapters are written by experts in the field Cutting-edge material
Download or read book Uranium Enrichment and Nuclear Weapon Proliferation written by Allan S. Krass and published by Routledge. This book was released on 2020-11-20 with total page 325 pages. Available in PDF, EPUB and Kindle. Book excerpt: Originally published in 1983, this book presents both the technical and political information necessary to evaluate the emerging threat to world security posed by recent advances in uranium enrichment technology. Uranium enrichment has played a relatively quiet but important role in the history of efforts by a number of nations to acquire nuclear weapons and by a number of others to prevent the proliferation of nuclear weapons. For many years the uranium enrichment industry was dominated by a single method, gaseous diffusion, which was technically complex, extremely capital-intensive, and highly inefficient in its use of energy. As long as this remained true, only the richest and most technically advanced nations could afford to pursue the enrichment route to weapon acquisition. But during the 1970s this situation changed dramatically. Several new and far more accessible enrichment techniques were developed, stimulated largely by the anticipation of a rapidly growing demand for enrichment services by the world-wide nuclear power industry. This proliferation of new techniques, coupled with the subsequent contraction of the commercial market for enriched uranium, has created a situation in which uranium enrichment technology might well become the most important contributor to further nuclear weapon proliferation. Some of the issues addressed in this book are: A technical analysis of the most important enrichment techniques in a form that is relevant to analysis of proliferation risks; A detailed projection of the world demand for uranium enrichment services; A summary and critique of present institutional non-proliferation arrangements in the world enrichment industry, and An identification of the states most likely to pursue the enrichment route to acquisition of nuclear weapons.
Download or read book Small signal stability control and dynamic performance of power systems written by M.J Gibbard and published by University of Adelaide Press. This book was released on 2015-07-15 with total page 686 pages. Available in PDF, EPUB and Kindle. Book excerpt: A thorough and exhaustive presentation of theoretical analysis and practical techniques for the small-signal analysis and control of large modern electric power systems as well as an assessment of their stability and damping performance.
Download or read book Condition Monitoring with Vibration Signals written by Hosameldin Ahmed and published by John Wiley & Sons. This book was released on 2020-01-07 with total page 456 pages. Available in PDF, EPUB and Kindle. Book excerpt: Provides an extensive, up-to-date treatment of techniques used for machine condition monitoring Clear and concise throughout, this accessible book is the first to be wholly devoted to the field of condition monitoring for rotating machines using vibration signals. It covers various feature extraction, feature selection, and classification methods as well as their applications to machine vibration datasets. It also presents new methods including machine learning and compressive sampling, which help to improve safety, reliability, and performance. Condition Monitoring with Vibration Signals: Compressive Sampling and Learning Algorithms for Rotating Machines starts by introducing readers to Vibration Analysis Techniques and Machine Condition Monitoring (MCM). It then offers readers sections covering: Rotating Machine Condition Monitoring using Learning Algorithms; Classification Algorithms; and New Fault Diagnosis Frameworks designed for MCM. Readers will learn signal processing in the time-frequency domain, methods for linear subspace learning, and the basic principles of the learning method Artificial Neural Network (ANN). They will also discover recent trends of deep learning in the field of machine condition monitoring, new feature learning frameworks based on compressive sampling, subspace learning techniques for machine condition monitoring, and much more. Covers the fundamental as well as the state-of-the-art approaches to machine condition monitoringguiding readers from the basics of rotating machines to the generation of knowledge using vibration signals Provides new methods, including machine learning and compressive sampling, which offer significant improvements in accuracy with reduced computational costs Features learning algorithms that can be used for fault diagnosis and prognosis Includes previously and recently developed dimensionality reduction techniques and classification algorithms Condition Monitoring with Vibration Signals: Compressive Sampling and Learning Algorithms for Rotating Machines is an excellent book for research students, postgraduate students, industrial practitioners, and researchers.
Download or read book Cellular Signal Transduction in Toxicology and Pharmacology written by Jonathan W. Boyd and published by John Wiley & Sons. This book was released on 2019-04-16 with total page 336 pages. Available in PDF, EPUB and Kindle. Book excerpt: Covering a key topic due to growing research into the role of signaling mechanisms in toxicology, this book focuses on practical approaches for informatics, big data, and complex data sets. Combines fundamentals / basics with experimental applications that can help those involved in preclinical drug studies and translational research Includes detailed presentations of study methodology and data collection, analysis, and interpretation Discusses tools like experimental design, sample handling, analytical measurement techniques
Download or read book Design basis Accident Analysis Methods For Light water Nuclear Power Plants written by Robert Martin and published by World Scientific. This book was released on 2019-02-13 with total page 717 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book captures the principles of safety evaluation as practiced in the regulated light-water reactor nuclear industry, as established and stabilized over the last 30 years. It is expected to serve both the current industry and those planning for the future. The work's coverage of the subject matter is the broadest to date, including not only the common topics of modeling and simulation, but also methods supporting the basis for the underlying assumptions, the extension to radiological safety, what to expect in a licensing review, historical perspectives and the implication for new designs.This text is an essential resource for practitioners and students, on the current best-practices in nuclear power plant safety and their basis. Contributors of this work are subject matter experts in their specialties, much of which was nurtured and inspired by Prof. Larry Hochreiter, a prominent nuclear safety pioneer.Related Link(s)
Download or read book Passive Nondestructive Assay of Nuclear Materials written by Doug Reilly and published by . This book was released on 1991 with total page 700 pages. Available in PDF, EPUB and Kindle. Book excerpt:
