Download or read book Algebraic and Numeric Biology written by Katsuhisa Horimoto and published by Springer Science & Business Media. This book was released on 2012-02-14 with total page 193 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the 4th International Conference on Algebraic Biology, ANB 2010, held at the Castle of Hagenberg, Austria in July/August 2010. The conference is a follow up of the AB Conference. The 10 papers were carefully reviewed and selected from numerous submissions. The papers are organized in topical sections on mathematical modeling, system analysis and design, genomics, molecular structure analysis, automata theory, artificial intelligence, sequence analysis, automated reasoning, formal language and hybrid symbolic numerical methods.
Download or read book A Course in Mathematical Biology written by Gerda de Vries and published by SIAM. This book was released on 2006-07-01 with total page 307 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the only book that teaches all aspects of modern mathematical modeling and that is specifically designed to introduce undergraduate students to problem solving in the context of biology. Included is an integrated package of theoretical modeling and analysis tools, computational modeling techniques, and parameter estimation and model validation methods, with a focus on integrating analytical and computational tools in the modeling of biological processes. Divided into three parts, it covers basic analytical modeling techniques; introduces computational tools used in the modeling of biological problems; and includes various problems from epidemiology, ecology, and physiology. All chapters include realistic biological examples, including many exercises related to biological questions. In addition, 25 open-ended research projects are provided, suitable for students. An accompanying Web site contains solutions and a tutorial for the implementation of the computational modeling techniques. Calculations can be done in modern computing languages such as Maple, Mathematica, and MATLAB?.
Download or read book Mathematical Models in Biology written by Leah Edelstein-Keshet and published by SIAM. This book was released on 1988-01-01 with total page 629 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mathematical Models in Biology is an introductory book for readers interested in biological applications of mathematics and modeling in biology. A favorite in the mathematical biology community, it shows how relatively simple mathematics can be applied to a variety of models to draw interesting conclusions. Connections are made between diverse biological examples linked by common mathematical themes. A variety of discrete and continuous ordinary and partial differential equation models are explored. Although great advances have taken place in many of the topics covered, the simple lessons contained in this book are still important and informative. Audience: the book does not assume too much background knowledge--essentially some calculus and high-school algebra. It was originally written with third- and fourth-year undergraduate mathematical-biology majors in mind; however, it was picked up by beginning graduate students as well as researchers in math (and some in biology) who wanted to learn about this field.
Download or read book Algebraic Statistics for Computational Biology written by L. Pachter and published by Cambridge University Press. This book was released on 2005-08-22 with total page 440 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book, first published in 2005, offers an introduction to the application of algebraic statistics to computational biology.
Download or read book Quantifying Life written by Dmitry A. Kondrashov and published by University of Chicago Press. This book was released on 2016-08-04 with total page 434 pages. Available in PDF, EPUB and Kindle. Book excerpt: Since the time of Isaac Newton, physicists have used mathematics to describe the behavior of matter of all sizes, from subatomic particles to galaxies. In the past three decades, as advances in molecular biology have produced an avalanche of data, computational and mathematical techniques have also become necessary tools in the arsenal of biologists. But while quantitative approaches are now providing fundamental insights into biological systems, the college curriculum for biologists has not caught up, and most biology majors are never exposed to the computational and probabilistic mathematical approaches that dominate in biological research. With Quantifying Life, Dmitry A. Kondrashov offers an accessible introduction to the breadth of mathematical modeling used in biology today. Assuming only a foundation in high school mathematics, Quantifying Life takes an innovative computational approach to developing mathematical skills and intuition. Through lessons illustrated with copious examples, mathematical and programming exercises, literature discussion questions, and computational projects of various degrees of difficulty, students build and analyze models based on current research papers and learn to implement them in the R programming language. This interplay of mathematical ideas, systematically developed programming skills, and a broad selection of biological research topics makes Quantifying Life an invaluable guide for seasoned life scientists and the next generation of biologists alike.
Download or read book Biology by Numbers written by Richard F. Burton and published by Cambridge University Press. This book was released on 1998-02-26 with total page 260 pages. Available in PDF, EPUB and Kindle. Book excerpt: A practical undergraduate textbook for maths-shy biology students showing how basic maths reveals important insights.
Download or read book Mathematical Methods in Biology written by J. David Logan and published by John Wiley & Sons. This book was released on 2009-08-17 with total page 437 pages. Available in PDF, EPUB and Kindle. Book excerpt: A one-of-a-kind guide to using deterministic and probabilistic methods for solving problems in the biological sciences Highlighting the growing relevance of quantitative techniques in scientific research, Mathematical Methods in Biology provides an accessible presentation of the broad range of important mathematical methods for solving problems in the biological sciences. The book reveals the growing connections between mathematics and biology through clear explanations and specific, interesting problems from areas such as population dynamics, foraging theory, and life history theory. The authors begin with an introduction and review of mathematical tools that are employed in subsequent chapters, including biological modeling, calculus, differential equations, dimensionless variables, and descriptive statistics. The following chapters examine standard discrete and continuous models using matrix algebra as well as difference and differential equations. Finally, the book outlines probability, statistics, and stochastic methods as well as material on bootstrapping and stochastic differential equations, which is a unique approach that is not offered in other literature on the topic. In order to demonstrate the application of mathematical methods to the biological sciences, the authors provide focused examples from the field of theoretical ecology, which serve as an accessible context for study while also demonstrating mathematical skills that are applicable to many other areas in the life sciences. The book's algorithms are illustrated using MATLAB®, but can also be replicated using other software packages, including R, Mathematica®, and Maple; however, the text does not require any single computer algebra package. Each chapter contains numerous exercises and problems that range in difficulty, from the basic to more challenging, to assist readers with building their problem-solving skills. Selected solutions are included at the back of the book, and a related Web site features supplemental material for further study. Extensively class-tested to ensure an easy-to-follow format, Mathematical Methods in Biology is an excellent book for mathematics and biology courses at the upper-undergraduate and graduate levels. It also serves as a valuable reference for researchers and professionals working in the fields of biology, ecology, and biomathematics.
Download or read book Computational Methods in Cell Biology written by Anand R. Asthagiri and published by Academic Press. This book was released on 2012-04-13 with total page 427 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computational methods are playing an ever increasing role in cell biology. This volume of Methods in Cell Biology focuses on Computational Methods in Cell Biology and consists of two parts: (1) data extraction and analysis to distill models and mechanisms, and (2) developing and simulating models to make predictions and testable hypotheses. Focuses on computational methods in cell biology Split into 2 parts--data extraction and analysis to distill models and mechanisms, and developing and simulating models to make predictions and testable hypotheses Emphasizes the intimate and necessary connection with interpreting experimental data and proposing the next hypothesis and experiment
Download or read book An Introduction to the Mathematics of Biology with Computer Algebra Models written by Edward K. Yeargers and published by Springer Science & Business Media. This book was released on 2013-12-01 with total page 426 pages. Available in PDF, EPUB and Kindle. Book excerpt: Biology is a source of fascination for most scientists, whether their training is in the life sciences or not. In particular, there is a special satisfaction in discovering an understanding of biology in the context of another science like mathematics. Fortunately there are plenty of interesting (and fun) problems in biology, and virtually all scientific disciplines have become the richer for it. For example, two major journals, Mathematical Biosciences and Journal of Mathematical Biology, have tripled in size since their inceptions 20-25 years ago. The various sciences have a great deal to give to one another, but there are still too many fences separating them. In writing this book we have adopted the philosophy that mathematical biology is not merely the intrusion of one science into another, but has a unity of its own, in which both the biology and the math ematics should be equal and complete, and should flow smoothly into and out of one another. We have taught mathematical biology with this philosophy in mind and have seen profound changes in the outlooks of our science and engineering students: The attitude of "Oh no, another pendulum on a spring problem!," or "Yet one more LCD circuit!" completely disappeared in the face of applications of mathematics in biology. There is a timeliness in calculating a protocol for ad ministering a drug.
Download or read book Logical Modeling of Biological Systems written by Luis Fariñas del Cerro and published by John Wiley & Sons. This book was released on 2014-08-08 with total page 328 pages. Available in PDF, EPUB and Kindle. Book excerpt: Systems Biology is the systematic study of the interactions between the components of a biological system and studies how these interactions give rise to the function and behavior of the living system. Through this, a life process is to be understood as a whole system rather than the collection of the parts considered separately. Systems Biology is therefore more than just an emerging field: it represents a new way of thinking about biology with a dramatic impact on the way that research is performed. The logical approach provides an intuitive method to provide explanations based on an expressive relational language. This book covers various aspects of logical modeling of biological systems, bringing together 10 recent logic-based approaches to Systems Biology by leading scientists. The chapters cover the biological fields of gene regulatory networks, signaling networks, metabolic pathways, molecular interaction and network dynamics, and show logical methods for these domains based on propositional and first-order logic, logic programming, answer set programming, temporal logic, Boolean networks, Petri nets, process hitting, and abductive and inductive logic programming. It provides an excellent guide for all scientists, biologists, bioinformaticians, and engineers, who are interested in logic-based modeling of biological systems, and the authors hope that new scientists will be encouraged to join this exciting scientific endeavor.
Download or read book Computer Algebra in Scientific Computing written by Vladimir P. Gerdt and published by Springer. This book was released on 2011-09-01 with total page 368 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the 13th International Workshop on Computer Algebra in Scientific Computing, CASC 2011, held in Kassel, Germany, in September 2011. The 26 full papers included in the book were carefully reviewed and selected from numerous submissions. The articles are organized in topical sections on the development of object oriented computer algebra software for the modeling of algebraic structures as typed objects; matrix algorithms; the investigation with the aid of computer algebra; the development of symbolic-numerical algorithms; and the application of symbolic computations in applied problems of physics, mechanics, social science, and engineering.
Download or read book A Mind for Numbers written by Barbara A. Oakley and published by TarcherPerigee. This book was released on 2014-07-31 with total page 338 pages. Available in PDF, EPUB and Kindle. Book excerpt: Engineering professor Barbara Oakley knows firsthand how it feels to struggle with math. In her book, she offers you the tools needed to get a better grasp of that intimidating but inescapable field.
Download or read book Mathematical Models in Biology written by Elizabeth Spencer Allman and published by Cambridge University Press. This book was released on 2004 with total page 388 pages. Available in PDF, EPUB and Kindle. Book excerpt: This introductory textbook on mathematical biology focuses on discrete models across a variety of biological subdisciplines. Biological topics treated include linear and non-linear models of populations, Markov models of molecular evolution, phylogenetic tree construction, genetics, and infectious disease models. The coverage of models of molecular evolution and phylogenetic tree construction from DNA sequence data is unique among books at this level. Computer investigations with MATLAB are incorporated throughout, in both exercises and more extensive projects, to give readers hands-on experience with the mathematical models developed. MATLAB programs accompany the text. Mathematical tools, such as matrix algebra, eigenvector analysis, and basic probability, are motivated by biological models and given self-contained developments, so that mathematical prerequisites are minimal.
Download or read book Numerical Techniques for Chemical and Biological Engineers Using MATLAB written by Said S.E.H. Elnashaie and published by Springer Science & Business Media. This book was released on 2007-03-12 with total page 595 pages. Available in PDF, EPUB and Kindle. Book excerpt: This interdisciplinary book presents numerical techniques needed for chemical and biological engineers using Matlab. The book begins by exploring general cases, and moves on to specific ones. The text includes a large number of detailed illustrations, exercises and industrial examples. The book provides detailed mathematics and engineering background in the appendixes, including an introduction to Matlab. The text will be useful to undergraduate students in chemical/biological engineering, and in applied mathematics and numerical analysis.
Download or read book Mathematics for Biological Scientists written by Mike Aitken and published by Garland Science. This book was released on 2009-09-30 with total page 473 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mathematics for Biological Scientists is a new undergraduate textbook which covers the mathematics necessary for biology students to understand, interpret and discuss biological questions. The book's twelve chapters are organized into four themes. The first theme covers the basic concepts of mathematics in biology, discussing the mathematics used in biological quantities, processes and structures. The second theme, calculus, extends the language of mathematics to describe change. The third theme is probability and statistics, where the uncertainty and variation encountered in real biological data is described. The fourth theme is explored briefly in the final chapter of the book, which is to show how the 'tools' developed in the first few chapters are used within biology to develop models of biological processes. Mathematics for Biological Scientists fully integrates mathematics and biology with the use of colour illustrations and photographs to provide an engaging and informative approach to the subject of mathematics and statistics within biological science.
Download or read book Algebraic Biology Matrix Genetics And Genetic Intelligence written by Sergei V Petoukhov and published by World Scientific. This book was released on 2023-08-02 with total page 616 pages. Available in PDF, EPUB and Kindle. Book excerpt: Historically, mathematics, probability, and statistics have been widely used in the biological sciences. Recent progress in genomics has yielded many millions of gene sequences. But what do these sequences tell us and what are the generalities and rules governed by them? It seems that we understand very little about the genetic contexts required to 'read' them. There is more to life than the genomic blueprint of each organism. Life functions within the natural laws that we know and the ones we do not know. The development of modern mathematical natural sciences is based on the use of certain mathematical tools. Mathematics can be used to understand life from the molecular to the biosphere level.This book provides the foundation and latest advances for an emerging research area that uses tools from symbolic computation, computer algebra and logic, algebraic geometry, fractal geometry, probability and statistics, and matrix algebra to formalize and solve biological problems and explore its applications in algebraic biology and code biology. It introduces highly interdisciplinary topics in biomathematics such as matrix genetics, gestalt biology, bio-antenna arrays, resonance genetics, quantum biology, and more.
Download or read book A Primer in Mathematical Models in Biology written by Lee A. Segel and published by SIAM. This book was released on 2013-05-09 with total page 435 pages. Available in PDF, EPUB and Kindle. Book excerpt: A textbook on mathematical modelling techniques with powerful applications to biology, combining theoretical exposition with exercises and examples.
