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Book A Study on New Approaches in Coherent X ray Microscopy of Biological Specimens

Download or read book A Study on New Approaches in Coherent X ray Microscopy of Biological Specimens written by Klaus Giewekemeyer and published by Universitätsverlag Göttingen. This book was released on 2011 with total page 226 pages. Available in PDF, EPUB and Kindle. Book excerpt: The use of coherent x rays for microscopic imaging has seen a rapid and ongoing development within the past decade, driven by an increasing availability of highly brilliant and coherent sources worldwide. Accordingly, novel methods have been developed, which replace the microscope‘s objective lens by a numerical reconstruction scheme. The aim of the present work is to study how very recent experimental and algorithmic developments in the field can be implemented towards a highly sensitive and fully quantitative microscopy method for imaging of biological cells. To this end, different experimental approaches are studied, based on coherent far-field as well as near-field diffraction. At first, an application of the novel ptychographic imaging method to single biological cells is presented. In particular, it is demonstrated how weakly scattering biological specimens can be imaged with fully quantitative density contrast. Alongside, a sueccessful extension of the method towards soft x-ray energies is described.In the second part of the work it is shown how x-ray waveguides can be used as a point source for propagation-based microscopy of single cells in the hard x-ray regime. The specifically devised iterative reconstruction scheme allows for full quantitativity and high sensitivity and thus enables an application to single biological cells. The work contains a thorough introduction into the x-ray optical methods applied and aims at a useful and self-contained overview on aspects of signal and Fourier theory relevant for the used numerical propagation schemes.

Book X ray Microscopy

    Book Details:
  • Author : Ping-chin Cheng
  • Publisher : Springer
  • Release : 1987
  • ISBN :
  • Pages : 442 pages

Download or read book X ray Microscopy written by Ping-chin Cheng and published by Springer. This book was released on 1987 with total page 442 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book Hard X ray Microscopy Enhanced by Coherent Image Reconstruction

Download or read book Hard X ray Microscopy Enhanced by Coherent Image Reconstruction written by Jakob Soltau and published by Universitätsverlag Göttingen. This book was released on 2022 with total page 212 pages. Available in PDF, EPUB and Kindle. Book excerpt: X-ray microscopy is used to study the structure, dynamics and bulk properties of matter with high spatial resolutions. It is widely applied, from physics and chemistry to material and life sciences. In the past two decades, progress in X-ray microscopy was driven either by improvements in X-ray optics or by improvements in the image reconstruction by using algorithms as computational lenses. In this work both approaches are combined to exploit the advantages of X-ray imaging with a large numerical aperture and the advantages of coherent image reconstruction. It is shown that a combined X-ray microscope using both, advanced optics and algorithms, is neither limited by flawed optics nor by constraints imposed by reconstruction algorithms, which enables to go beyond current limits in resolution and applications. The thesis is structured in four parts. In the first part hard X-ray lenses, so called multilayer zone plates, are simulated to investigate volume diffraction effects within the multilayer structure, and to study the potential for smaller focus sizes and higher efficiencies. In the second part, the multilayer zone plates are characterized and implemented in an X-ray microscope. In the third part, a new imaging scheme is presented, which combines in-line holography and coherent diffractive imaging. This method overcomes the current resolution limit of in-line holography and can achieve super-resolution with respect to the numerical aperture of the illuminating beam. Finally, in the fourth part a multilayer zone plate is used as an objective lens with a known transfer function in a novel coherent full-field imaging experiment based on iterative phase retrieval, for high resolution and quantitative contrast.

Book Coherent X ray diffractive imaging on the single cell level of microbial samples

Download or read book Coherent X ray diffractive imaging on the single cell level of microbial samples written by Robin Niklas Wilke and published by Göttingen University Press. This book was released on 2015 with total page 254 pages. Available in PDF, EPUB and Kindle. Book excerpt: Since its first experimental demonstration in 1999, Coherent X-Ray Diffractive Imaging has become one of the most promising high resolution X-Ray imaging techniques using coherent radiation produced by brilliant synchrotron storage rings. The ability to directly invert diffraction data with the help of advanced algorithms has paved the way for microscopic investigations and wave-field analyses on the spatial scale of nanometres without the need for inefficient imaging lenses. X-Ray phase contrast which is a measure of the electron density is an important contrast mode of soft biological specimens. For the case of many dominant elements of soft biological matter, the electron density can be converted into an effective mass density offering a unique quantitative information channel which may shed light on important questions such as DNA compaction in the bacterial nucleoid through ‚weighing with light‘. In this work X-Ray phase contrast maps have been obtained from different biological samples by exploring different methods. In particular, the techniques Ptychography and Waveguide-Holographic-Imaging have been used to obtain twodimensional and three-dimensional mass density maps on the single-cell-level of freeze-dried cells of the bacteria Deinococcus radiodurans, Bacillus subtilis and Bacillus thuringiensis allowing, for instance, to estimate the dry weight of the bacterial genome in a near native state. On top of this, reciprocal space information from coherent small angle X-Ray scattering (cellular Nano-Diffraction) of the fine structure of the bacterial cells has been recorded in a synergistic manner and has been analysed down to a resolution of about 2.3/nm exceeding current limits of direct imaging approaches. Furthermore, the dynamic range of present detector technology being one of the major limiting factors of ptychographic phasing of farfield diffraction data has been significantly increased. Overcoming this problem for the case of the very intense X-Ray beam produced by Kirkpatrick-Baez mirrors has been explored by using semi-transparent central stops.

Book Multiscale X Ray Analysis of Biological Cells and Tissues by Scanning Diffraction and Coherent Imaging

Download or read book Multiscale X Ray Analysis of Biological Cells and Tissues by Scanning Diffraction and Coherent Imaging written by Jan-David Nicolas and published by Göttingen University Press. This book was released on 2019 with total page 183 pages. Available in PDF, EPUB and Kindle. Book excerpt: Understanding the intricate details of muscle contraction has a long-standing tradition in biophysical research. X-ray diffraction has been one of the key techniques to resolve the nanometer-sized molecular machinery involved in force generation. Modern, powerful X-ray sources now provide billions of X-ray photons in time intervals as short as microseconds, enabling fast time-resolved experiments that shed further light on the complex relationship between muscle structure and function. Another approach harnesses this power by repeatedly performing such an experiment at different locations in a sample. With millions of repeated exposures in a single experiment, X-ray diffraction can seamlessly be turned into a raster imaging method, neatly combining real- and reciprocal space information. This thesis has focused on the advancement of this scanning scheme and its application to soft biological tissue, in particular muscle tissue. Special emphasis was placed on the extraction of meaningful, quantitative structural parameters such as the interfilament distance of the actomyosin lattice in cardiac muscle. The method was further adapted to image biological samples on a range of scales, from isolated cells to millimeter-sized tissue sections. Due to the ‘photon-hungry’ nature of the technique, its full potential is often exploited in combination with full-field imaging techniques. From the vast set of microscopic tools available, coherent full-field X-ray imaging has proven to be particularly useful. This multimodal approach allows to correlate two- and three-dimensional images of cells and tissue with diffraction maps of structure parameters. With the set of tools developed in this thesis, scanning X-ray diffraction can now be efficiently used for the structural analysis of soft biological tissues with overarching future applications in biophysical and biomedical research.

Book X Ray Microscopy II

    Book Details:
  • Author : David Sayre
  • Publisher : Springer
  • Release : 2013-06-05
  • ISBN : 3540392467
  • Pages : 464 pages

Download or read book X Ray Microscopy II written by David Sayre and published by Springer. This book was released on 2013-06-05 with total page 464 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume is based on papers presented at the International Symposium on X-Ray Microscopy held at Brookhaven National Laboratory, Upton NY, August 31-September 4, 1987. Previous recent symposia on the sub ject were held in New York in 1979, Gottingen in 1983 and Taipei in 1986. Developments in x-ray microscopy continue at a rapid pace, with im portant advances in all major areas: x-ray sources, optics and components, and microscopes and imaging systems. Taken as a whole, the work pre sented here emphasizes three major directions: (a) improvements in the capability and image-quality of x-ray microscopy, expressed principally in systems attached to large, high-brightness x-ray sources; (b) greater access to x-ray microscopy, expressed chiefly in systems employing small, often pulsed, x-ray sources; and (c) increased rate of exploration of applications of x-ray microscopy. The number of papers presented at the symposium has roughly dou bled compared with that of its predecessors. While we are delighted at this growth as a manifestation of vitality and rapid growth of the field, we did have to ask the authors to limit the length of their papers and to submit them in camera-ready form. We thank the authors for their con tributions and for their efforts in adhering to the guidelines on manuscript preparation.

Book X ray Microscopy

Download or read book X ray Microscopy written by Chris Jacobsen and published by Cambridge University Press. This book was released on 2019-12-19 with total page 595 pages. Available in PDF, EPUB and Kindle. Book excerpt: Written by a pioneer in the field, this text provides a complete introduction to X-ray microscopy, providing all of the technical background required to use, understand and even develop X-ray microscopes. Starting from the basics of X-ray physics and focusing optics, it goes on to cover imaging theory, tomography, chemical and elemental analysis, lensless imaging, computational methods, instrumentation, radiation damage, and cryomicroscopy, and includes a survey of recent scientific applications. Designed as a 'one-stop' text, it provides a unified notation, and shows how computational methods in different areas are linked with one another. Including numerous derivations, and illustrated with dozens of examples throughout, this is an essential text for academics and practitioners across engineering, the physical sciences and the life sciences who use X-ray microscopy to analyze their specimens, as well as those taking courses in X-ray microscopy.

Book X ray Microanalysis for Biologists

Download or read book X ray Microanalysis for Biologists written by Alice Warley and published by Ashgate Publishing. This book was released on 1997 with total page 308 pages. Available in PDF, EPUB and Kindle. Book excerpt: The smart way to learn how to build InfoPath forms for SharePoint - one step at a time. Design and build forms without writing code, add approval workflows to your forms, integrate data, create and use forms in the cloud.

Book High Resolution Extreme Ultraviolet Microscopy

Download or read book High Resolution Extreme Ultraviolet Microscopy written by Michael Werner Zürch and published by Springer. This book was released on 2014-11-07 with total page 139 pages. Available in PDF, EPUB and Kindle. Book excerpt: This thesis describes novel approaches and implementation of high-resolution microscopy in the extreme ultraviolet light regime. Using coherent ultrafast laser-generated short wavelength radiation for illuminating samples allows imaging beyond the resolution of visible-light microscopes. Michael Zürch gives a comprehensive overview of the fundamentals and techniques involved, starting from the laser-based frequency conversion scheme and its technical implementation as well as general considerations of diffraction-based imaging at nanoscopic spatial resolution. Experiments on digital in-line holography and coherent diffraction imaging of artificial and biologic specimens are demonstrated and discussed in this book. In the field of biologic imaging, a novel award-winning cell classification scheme and its first experimental application for identifying breast cancer cells are introduced. Finally, this book presents a newly developed technique of generating structured illumination by means of so-called optical vortex beams in the extreme ultraviolet regime and proposes its general usability for super-resolution imaging.

Book X RAY MICROANALYSIS OF BIOLOGICAL SPECIMENS  NEW APPROACHES  PAPERS

Download or read book X RAY MICROANALYSIS OF BIOLOGICAL SPECIMENS NEW APPROACHES PAPERS written by and published by . This book was released on with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book X Ray Microscopy and Spectromicroscopy

Download or read book X Ray Microscopy and Spectromicroscopy written by Jürgen Thieme and published by Springer Science & Business Media. This book was released on 2013-11-09 with total page 382 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is based on presentations to the International Conference of X-Ray Micro scopy and Spectromicroscopy, XRM 96, which took place in Wiirzburg, August 19- 23, 1996. The conference also celebrated the lOOth anniversary of the discovery of X rays by Wilhelm Conrad Rontgen on November 8, 1895, in Wiirzburg. This book contains state-of-the-art reviews and up-to-date progress reports in the field of X-ray microscopy and spectromicroscopy, including related new X-ray optics and X-ray sources. It reflects the lively activities within a relatively new field of science which combines the development of new instruments and methods with their applications to numerous topical scientific questions. The applications range from biological and medical topics, colloid physics, and soil sciences to solid-state physics, material sciences, and surface sciences. Their variety demonstrates the interdisci plinary and cooperative character of this field and the growing demand for micro scopic and spectromicroscopic information on the nanometer scale and under specific sample conditions, for example in wet (natural) surroundings or on a solid surface.

Book X Ray Microscopy in Biology and Medicine

Download or read book X Ray Microscopy in Biology and Medicine written by Kunio Shinohara and published by Springer. This book was released on 1990-04-18 with total page 360 pages. Available in PDF, EPUB and Kindle. Book excerpt: The papers presented review recent progress in X-ray microscopy both in methodology and in biomedical applications, they compare characteristics of X-ray microscopy with other related forms of microscopy, and they discuss activities of X-ray microscopy in Japan in particular. This review will surely encourage engineers and physicists to accelerate further development of X-ray microscopes to provide even more useful tools to solve biological and medical questions.

Book Modern Microscopies

    Book Details:
  • Author : P.J. Duke
  • Publisher : Springer Science & Business Media
  • Release : 2013-11-11
  • ISBN : 1461314674
  • Pages : 281 pages

Download or read book Modern Microscopies written by P.J. Duke and published by Springer Science & Business Media. This book was released on 2013-11-11 with total page 281 pages. Available in PDF, EPUB and Kindle. Book excerpt: For several decades the electron microscope has been the instrument of choice for the examination of biological structures at high resolution. Biologists have be come familiar with the techniques and pitfalls of sample preparation and with the interpretation of the images obtained. The purpose of this book is to introduce the biologist to a number of new imaging techniques that are now becoming avail able to supplement and even extend the information that can be obtained from the now-traditional electron microscope. Some of these techniques are still at the experimental stage, while others, such as cryoelectron microscopy and confocal optical microscopy, are at advanced stages of development and are already avail able commercially. This book represents a first attempt to quantify the progress made by bring ing together, in one volume, an account of the technical bases and the future potentials of the various techniques. Although the content is primarily aimed at biologists, microscopists in other fields should also find the information of interest and use. All the chapters are written by leading experts who are at the forefront of these exciting developments. About half the book is concerned with x-ray microscopy; the editors make no apology for this since they are both intimately involved with developments associated with this field and therefore view it, perhaps with bias, as being of the utmost importance.

Book X ray Microscopy II

Download or read book X ray Microscopy II written by David Sayre and published by Springer. This book was released on 1988 with total page 472 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Book Nanobeam X Ray Scattering

Download or read book Nanobeam X Ray Scattering written by Julian Stangl and published by John Wiley & Sons. This book was released on 2013-09-10 with total page 361 pages. Available in PDF, EPUB and Kindle. Book excerpt: A comprehensive overview of the possibilities and potential of X-ray scattering using nanofocused beams for probing matter at the nanoscale, including guidance on the design of nanobeam experiments. The monograph discusses various sources, including free electron lasers, synchrotron radiation and other portable and non-portable X-ray sources. For scientists using synchrotron radiation or students and scientists with a background in X-ray scattering methods in general.

Book X ray Holography of Biological Specimens

Download or read book X ray Holography of Biological Specimens written by and published by . This book was released on 1984 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: The author reviews the reasons for x-ray imaging of biological specimens and the techniques presently being used for x-ray microscopy. The author points out the advantages of x-ray holography and the difficulties of obtaining the requisite coherence with conventional sources. The author discusses the problems of radiation damage and the remarkable fact that short pulse x-ray sources circumvent these problems and obtain high-resolution images of specimens in the living state. Finally, the author reviews some of the efforts underway to develop high-intensity coherent x-ray sources for the laboratory. 14 references, 5 figures, 2 tables.

Book Basic Methods in Biological X ray Microanalysis

Download or read book Basic Methods in Biological X ray Microanalysis written by Godfried M. Roomans and published by . This book was released on 1983 with total page 292 pages. Available in PDF, EPUB and Kindle. Book excerpt: